Ictalurus punctatus (channel catfish): 108264493
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Entry
108264493 CDS
T04658
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108264493
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108264493
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
108264493
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
108264493
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
ANK_LRRK2
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
108264493
NCBI-ProteinID:
XP_017321571
Ensembl:
ENSIPUG00000017273
UniProt:
A0A2D0QT09
A0A2D0QV08
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All DBs
Position
4:35377992..35386313
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AA seq
409 aa
AA seq
DB search
MSLVDLGKKLLEAARSGQDDEVRILMANGAPFTTDWLGTSPLHLSAQYGHYSTTEVLLRA
GVSRDARTKVDRTPLHMAASEGHASIVEVLLQHGADVNAKDMLKMTALHWAVEHGHGDVV
ALLLRFGADVHAQSKFGKTALDIALDNNNEDLAEILQVAMQNQINTNPESPDMLTIHTAS
PQFIIGPGGVVNLTGLISPSNTAKPAGTHTHTHTHTHLISPCNTAKPAGTHTHTHTHTHT
HTHLISPSNTAKPAVMATEEVVTADSVDGAIQQVMTSGGQQVITIVTDGIQLGNLQGGGA
INQPIIVTMPDGQQVLTVPATDVAEETVVSDEPSLKRARLEVEEEEEEEENTTTHTHETK
EKVALLKQLEEANREAQKYRQQFLKKEQEAEAYRQKLEAITRQGGKKPA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggtggatctggggaagaagttgctggaggcggctcgctctggacaggatgac
gaggttcggatcctcatggctaacggagctccgttcaccacagactggctgggcacatcg
ccactccacctctcagctcagtacggtcactattcaaccaccgaagtgctgctgcgcgcc
ggcgtcagccgagacgctcgcaccaaagtggaccgaacacctctgcacatggctgcttcg
gaaggccacgcctccatcgtagaggtgctgctgcagcacggtgctgacgtgaatgctaag
gacatgttgaagatgacggctctgcactgggcggttgaacatggacacggtgacgtggtg
gcgctgctgctgaggtttggcgctgacgttcacgctcagagtaaattcggcaaaacggcg
cttgatattgcgctcgacaacaacaatgaggacctggcggaaatcctgcaggtggcgatg
cagaaccaaatcaacacaaaccccgagagtcccgacatgctgaccatccacactgcatct
cctcagttcatcatcggcccggggggcgtggtcaacctgaccggcctcatctcaccctcg
aacactgctaaacctgcaggtacacacacacacacacacacacacacacacctcatctca
ccctgtaacactgctaaacctgcaggtacacacacacacacacacacacacacacacaca
cacacacacctcatctcaccctcgaacactgctaaacctgcagtgatggccacagaggag
gtggtgactgcagactctgtcgatggcgctatccaacaggtcatgacctctggaggtcag
caggtcatcaccatagtaaccgacggcattcagctgggaaacctgcaagggggcggagcc
atcaaccagcccattatagtcaccatgcctgacgggcagcaagtgttgacagttccagcc
acagatgtagcagaggaaacggtggtgagtgacgaaccatcactgaagcgagcgagactg
gaagtggaagaagaggaggaagaggaggagaacaccaccacacacacacacgagaccaag
gagaaggtggcgttgttgaagcagttggaggaggcgaacagagaagcgcagaaatacaga
cagcagttcctgaagaaggagcaggaagctgaggcgtaccgccaaaaactggaggccatc
acacgccaaggggggaagaaaccggcgtga
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