Ictalurus punctatus (channel catfish): 108264557
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Entry
108264557 CDS
T04658
Symbol
arih1
Name
(RefSeq) E3 ubiquitin-protein ligase arih1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108264557 (arih1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108264557 (arih1)
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108264557 (arih1)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108264557 (arih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_14
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
108264557
NCBI-ProteinID:
XP_017321673
Ensembl:
ENSIPUG00000020676
UniProt:
W5U739
LinkDB
All DBs
Position
4:12786606..12817756
Genome browser
AA seq
525 aa
AA seq
DB search
MDSDEGYNYEYDDEEEECSEDSAEEEAEDDTLELGDVELVDPVVPGGDRDECGETGGSGL
GHDEEDYRFEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYFDG
NLDKLFSECHVINPSKKSRMRLMNTRSSAQDMPCQICYLNYPNSYFTGLECGHKFCMQCW
GDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRL
LKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSE
TSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRY
NEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSW
IEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENATEVLSGYLERD
ISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacgagggttacaattatgaatacgacgacgaggaagaggagtgcagcgag
gacagcgctgaagaggaagccgaggacgacaccctggagctcggcgatgtggagctggtc
gatcccgtggtgcccggcggcgaccgagacgagtgcggggagaccggcggtagcggcctc
ggacacgacgaggaggactaccgctttgaagttctcaccgccgagcagatcctccagcat
atggtcgagtgcatcagggaggtcaacgaggtcatccagaatcctgcaacgattacaaga
atactgcttagtcatttcaactgggacaaggaaaagctcatggaaaggtactttgatggt
aacctggataagctgttttccgagtgtcatgtcataaaccctagtaaaaaatccaggatg
cgcctcatgaatacacgatcgtcagctcaggatatgccatgtcagatctgctatctcaac
taccctaattcgtacttcactggtttggaatgtgggcacaagttctgcatgcagtgctgg
ggcgactatttaaccaccaaaatcatagaagaaggaatgggccagaccatttcctgtcct
gcacatagttgtgatatcctggtcgatgacaacacagttatgcgactgataacagattcg
aaagtgaagttgaagtaccaacatttaataactaatagttttgtagagtgcaatcgactg
ttaaaatggtgtcccgctccggactgccatcatgtagtcaaagtccagtaccccgatgcc
aaacctgttcgctgcaagtgtggccggcagttctgcttcaactgtggtgagaactggcat
gacccagtaaagtgtaagtggttgagaaaatggattaaaaagtgtgacgacgacagtgaa
acatccaattggattgcagcaaacactaaggaatgtcctaaatgccatgtgaccatagag
aaggatggtggctgcaaccacatggtgtgtcggaaccagaactgcaaagcggagttctgc
tgggtctgcttaggcccgtgggaaccccacggatcagcctggtataattgcaatcgctac
aatgaagatgatgccaaggcagctagagatgcacaagagcgctccagagcagccttgcag
aggtacctattttactgcaaccgctacatgaaccacatgcagagcctgcgcttcgaacac
aagctgtacgcgcaggtcaagcagaagatggaggagatgcagcagcataatatgtcatgg
attgaggtgcagttcctgaagaaggctgtggacgtgctgtgccagtgccgctccacactc
atgttcacctacgtctttgccttctacctcaagaagaacaaccagtccattatttttgag
aacaaccaggctgatctagagaatgccacagaggtgttgtctggatacctagaacgagac
atttcccaagattcactgcaggacatcaagcagaaagtgcaagacaaatacagatactgt
gagagccgacggagagttctgctgcagcatgtgcacgaaggctatgaaaaagacctgtgg
gagtacatcgaggattga
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