Ictalurus punctatus (channel catfish): 108264561
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Entry
108264561 CDS
T04658
Name
(RefSeq) ATP-dependent DNA helicase DDX11 isoform X1
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108264561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108264561
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108264561
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
108264561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
108264561
NCBI-ProteinID:
XP_047008525
Ensembl:
ENSIPUG00000008500
UniProt:
A0A2D0QVB8
LinkDB
All DBs
Position
4:complement(3579012..3600710)
Genome browser
AA seq
906 aa
AA seq
DB search
MESGDGVSRFPFPFKPYPIQERFMEALYTVLEEGKVGIFESPTGTGKSLSLICGALTWLK
DFEEKKRQEAEKLLEHTVSASAVGGGGKNGDGITVREEEKSNSAGVDGELDWVSEFVQKR
AERELVNKLKDEEMKRKRREDRLEMIRHNAQLKYTMKRKNSENSETEKLLQFSKKDAGSE
DGPDEDEEDGLVVADYESDEETTPKNRLCDEEEDDDDLEEEHVTKIYYCSRTHSQLAQFV
HEVQKSPYNSTVSLVNLGSRQNLCINPEVARLGSVQLINDRCMELQKNKHDKQDKVDSEP
KRRRGAVKATCAFSGYEKMMTMRDEVLASVRDIEQLVQHGRDTHTCPYYSTRLAIPAAQV
VVLPYQSLLHAATRKASGIKLKDQIVIIDEAHNLGDTITALHSSEVNGAQLCRAHSQLSQ
YCERYRSRLKAKNLMYIKQILFVLEGLVRTLGGKVGLNPVTQSTQSGTELLTINDFLFRA
QIDNINLFKVQRYLEKSLISRKLFGFSEKYEGSGVSTHTSSMNKENRRTEGLGRFLQGLQ
SKATAPVEYQGSEEDRPIMASPMMLVESFLFALSSANKDGRVVMEKQTCLAQSSVKFLML
NAAVHFAQVLQECRAVVIAGGTMQPVSDFKEQLLLSAGAHKERIAEFSCGHVIPPENILP
IILCTGPSGQELEFTFQTRDRPQMMEETGRVLSNLCNVVPGGVVCFFPSYEYERRILGHW
ESNGVLQRLAAKKKIFQEPKKASQVERVLSEYSRCIQRCSNTGGGQSGALLFSVVGGKMS
EGINFSDDLGRCIVMVGMPYPNIKSPELQEKMAYLDKHMPHVDGRSPGKALIENLCMKAV
NQSIGRAIRHRDDYACIVLCDRRYARTGTLQKLPEWIRSSTRTHSNFGPAFAGIRKFFLE
KRRTQH
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggagagcggggatggagtcagtcgcttcccgtttccctttaagccgtatccgatccag
gagcgcttcatggaggcgctgtacaccgtgctcgaggagggcaaagtgggcatcttcgag
agccccaccggcacggggaagtctctgagtctgatctgtggtgctctgacatggctgaaa
gactttgaggagaagaaacgacaagaagctgagaagctcctggagcacacagtgagcgcg
agcgcagtaggtggaggaggaaaaaatggggacggaatcacggttcgggaggaggagaaa
agtaacagcgccggcgttgatggagagctggactgggtttcagagtttgtgcagaaaaga
gcagagagagagctggtgaacaaattaaaggatgaggagatgaaaaggaagaggagagag
gaccgactggagatgatcagacacaacgctcagctaaaatacaccatgaagagaaaaaac
agtgagaatagcgagactgaaaagctgctgcagttcagtaagaaggacgcgggatcagaa
gacggacctgacgaagacgaagaggacgggctcgttgttgcggattacgaaagcgatgaa
gaaaccacacccaaaaacaggctctgtgatgaggaggaggatgatgatgatctggaggaa
gagcatgtcactaagatttattactgcagccgtacacactcgcagctggcccagttcgtg
catgaagtgcagaagagtccgtataactccacagtcagcttggtcaatctcgggtctaga
cagaatctgtgcattaatccagaggtggcacgactgggaagcgttcagctgatcaacgat
cgctgtatggagctgcaaaaaaataaacacgataagcaggacaaggtggactcggagcct
aaacgccgccgcggtgccgtcaaagcgacgtgtgcgttctcaggctatgagaagatgatg
acgatgcgagacgaggtgctggcgagcgtcagagacatcgagcagctcgtgcagcatggc
cgagacacgcacacctgcccttattacagcacacggcttgctattcctgcagctcaggtg
gtggtgttgccgtatcaatcactccttcatgctgcgactcgcaaggcgtccgggatcaaa
ctgaaggatcagatcgtcattatcgacgaggctcacaacctcggggacacgatcacggca
ctgcacagttccgaggtcaacggagcacagctgtgcagggctcactcgcagctctctcaa
tactgcgagcgctacaggagccgcctgaaggccaagaatctgatgtatatcaagcaaatc
ctgtttgtgctggaggggcttgtgcgcactcttggagggaaggtgggcctgaatcctgtg
actcagagcactcagtcaggaactgaactgttaaccattaacgacttcctgttcagagct
cagatagacaacatcaacctgttcaaggtgcagagatatttggagaagagtctgatcagc
aggaagttgtttggattttctgagaagtatgaagggagcggtgtaagcacacacacaagt
tctatgaataaggagaatcgcagaaccgaaggactcggacgcttcttgcagggccttcag
agcaaagctacagctcctgtagagtatcagggttcagaagaagacagacccattatggcg
tctcctatgatgcttgtggaaagtttccttttcgctctctccagcgccaacaaagatgga
agagtggtgatggaaaaacaaacatgcctggctcagagtagtgtaaagtttctcatgctg
aatgcagcagttcattttgcacaagttctccaggaatgcagggccgtcgtaattgccggg
ggaaccatgcagcctgtctcagactttaaggagcagcttctcctgtcagctggagctcat
aaggagcgcattgcagagttttcatgtggtcatgtcatccctccggagaatattctaccc
ataatcctctgcactggaccctctggacaggagcttgagtttaccttccagaccagagac
agaccacagatgatggaggagacggggcgtgttctgtccaacctgtgcaacgtggttcca
ggaggcgtggtgtgtttcttcccctcttatgagtacgagaggagaattctgggacactgg
gagagtaacggagtcctccaacgactcgcagccaaaaagaagattttccaggaaccgaag
aaagcgagtcaggtggagcgggtgttgtccgagtactccaggtgcatccagcgctgcagc
aatactggaggcggccagtcgggggcactattgttctcggtggttggaggaaagatgagt
gaagggattaatttctcagatgacctgggcagatgtattgtgatggtcggaatgccgtac
cccaacatcaagtcccctgaacttcaggagaaaatggcgtatttagacaagcacatgcct
catgtggatggccgaagtccagggaaggctttaatcgaaaacctgtgcatgaaagctgtc
aatcagtcaattggccgggcgattcgtcacagggatgattacgcctgtatcgtgttgtgt
gaccgacgctacgcccgcaccggcacgctgcagaaacttcccgagtggatccgaagcagc
acacgcactcacagcaacttcgggccggccttcgccggcatcaggaagtttttcctggag
aagcgacgaacacagcactga
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