Ictalurus punctatus (channel catfish): 108264580
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Entry
108264580 CDS
T04658
Name
(RefSeq) GATOR complex protein WDR24 isoform X1
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108264580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108264580
Membrane trafficking [BR:
ipu04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
108264580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
zf-RING_16
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
DUF1290
DUF4820
Motif
Other DBs
NCBI-GeneID:
108264580
NCBI-ProteinID:
XP_017321719
Ensembl:
ENSIPUG00000000424
UniProt:
W5UC50
LinkDB
All DBs
Position
1:3635375..3641694
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AA seq
771 aa
AA seq
DB search
MEKMASVGTVSGRTMFCLLDAPANAISVCRDATQVVVAGRNIFKIFALEEEGFVERLNLR
VGRKPSLNFSCADVMWHQADDSLLATAATNGAVVTWNLSRPCRNKQEHLFAEHKRTVNKV
CFHPSEAHMLLSGSQDGFMKYFDLRKKESVSTFSGQSESVRDVQFSTKDFFTFAASFENG
NVQLWDIRRPDRYERMFTAHTGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTNRAKEIY
CVQTIASVARVKWRPERRWHLATCSMMVDHNIYVWDVRRPYIPFATFEEHKDVATGIVWR
NQHDPDVLLSGSKDSTLYQHMFNDASRPEVRANPEGLSFGLFGDLAFAAKESLMAADGGR
KPCPGGDRRYPIFFFKKHDVMERFAQVSSVLSVFECDPDGGGARMDWFIETASRYQLSGR
PFAELCDHNAKVAKQLNRPQVSTTWTMLRIMYSDPGHPTPPANHNMSKLGNMPLMNSFNT
KDMSAALNERNKENRQDTLETNLNNDENEETEGSDGQAEYLFGEAELDDDDLYSVEHDNQ
AAEEAEFSLPQEAFPLRHEIAEHAPAPELLAEKAESPQASGGETESVCLTPMESFSLISV
SQLLFQPRLLPGFFNAIVKDTLAYYAEQGDVQMAVSALIVLGERIRREIDELTQEHWYMS
YIDLLQRFELWNVSNEVIKLSTCSAITCLNQASTTLHINCSNCKRPMSNKGWICDRCHQC
ASVCAVCHHVVKGLFVWCQGCSHGGHLEHVMEWLKSSNHCPAGCGHLCEYA
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatggcctccgtcggcaccgtcagtggccgaaccatgttctgcctcctggat
gctccagccaatgccatcagcgtgtgtcgggatgccacgcaggtggtggtggctgggcgc
aacatcttcaagatcttcgcgcttgaagaggaaggcttcgtggagcggctgaacctgcgc
gtgggccgcaaaccgtcgctgaacttcagctgcgctgacgtcatgtggcaccaggccgat
gacagtctcctggctacggcggccaccaacggcgcggtggtgacgtggaacctgtcgcgg
ccgtgtcgtaataagcaggagcaccttttcgccgagcacaaacgcaccgtcaacaaggtg
tgcttccacccaagcgaggcgcacatgctgctctccggctctcaggacggcttcatgaag
tacttcgacctgcgcaagaaggagagcgtcagcaccttctccggtcagtcggagagcgtt
cgagacgtgcagttcagcacgaaggactttttcacgtttgcggcgtcattcgagaacggg
aacgtgcagctgtgggacatccgcagacctgaccgttatgagaggatgttcactgctcac
accggccccgtgttctgctgtgactggcaccctgaggacagaggatggctagcgacgggt
gggcgtgacaagatggtgaaagtgtgggacatgacgaccaaccgcgccaaagagatctac
tgcgtgcagaccatcgcctcggtggcgcgggtcaagtggcggccagagcgtcgctggcac
ctggccacgtgctccatgatggtggaccacaacatctatgtttgggacgtacgccggccc
tacatcccattcgccaccttcgaggagcacaaggacgtcgccacgggcatcgtgtggcgc
aaccagcacgaccccgacgtgctactctccggctccaaagacagcacgctgtaccagcac
atgttcaacgatgccagtcggccagaggtgcgtgccaaccccgagggcctcagcttcggt
ctgttcggagacctagccttcgccgccaaggagagcctgatggcggccgacggcgggcgc
aagccgtgcccgggcggagaccgccgctaccctatcttcttcttcaagaagcacgacgta
atggagcgcttcgcacaggtctccagtgtactcagtgttttcgagtgcgatcccgatggc
ggcggcgccaggatggactggttcattgagacggcgtccaggtaccagctgagcgggaga
ccctttgctgagctctgcgaccacaacgccaaggtcgccaagcagctcaacagacctcag
gtgtcgaccacgtggaccatgctacggataatgtattccgacccgggtcacccaacacca
ccggctaatcacaacatgagtaaactgggtaacatgcccctcatgaacagtttcaataca
aaggatatgagtgctgctctgaacgagagaaacaaagagaatagacaggacaccctggag
acaaacctcaacaacgacgagaacgaagaaacggagggaagcgacggtcaggccgagtat
ctgtttggagaggccgagttggatgacgacgacctgtacagcgtggagcacgacaatcag
gcagcagaggaggcggagttttctctcccccaagaggcgttcccgctgcggcacgagatc
gcggaacatgcgccggcacccgagctgctggccgagaaagccgagtctccgcaggcaagc
ggcggcgagacggagagcgtgtgcctgacgcccatggagtcgttcagcctgatctcggtg
tcgcagttgctcttccagccacgcctgctgcccggcttcttcaacgccatcgtcaaggac
acgctggcctactacgccgagcagggtgacgtccagatggccgtctccgcgctcatcgtc
ctcggcgaacgaatccgcagggagattgacgagctcacacaggaacactggtacatgtcc
tacatcgacctgctgcagaggttcgagctgtggaacgtcagcaacgaggtgatcaaactg
agcacgtgcagcgccatcacatgtctgaaccaggcgtccaccacgctgcacatcaactgc
agcaactgcaaacgacccatgagcaacaagggctggatctgtgacaggtgccaccagtgc
gcgagtgtatgtgcagtgtgtcaccacgtcgtgaagggtctgttcgtgtggtgtcagggc
tgcagccacggcggccatttggagcacgtgatggagtggctcaagagctccaaccactgc
cctgctgggtgtggacacctgtgtgaatatgcctga
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