Ictalurus punctatus (channel catfish): 108264606
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Entry
108264606 CDS
T04658
Symbol
ppfibp2a
Name
(RefSeq) liprin-beta-2 isoform X1
KO
K27096
liprin-beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108264606 (ppfibp2a)
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108264606 (ppfibp2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
FxsA
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
108264606
NCBI-ProteinID:
XP_017321784
Ensembl:
ENSIPUG00000006130
UniProt:
A0A2D0QTZ1
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Position
4:1791159..1829445
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AA seq
939 aa
AA seq
DB search
MDGVMEGLKTIVPVHETSCVPVLLESADRRMSLRVLQLAEDLKDILDTELYKEDKDSLRR
QVPTTTVHTLLLCLDKSLVNLQAKGNNESYQERLCRLEGDKESLVLQVSVLTDQVEAQGE
KIRDLENSLEEHQHKLNSTGEMLQQELLSRTALESQKLDLMDEVSCLKLKLVSMEERQNH
SAERQHKAESVVNLISELQEQMCRIQQELCCKVQEKKAAEIQEDEEAGTDASLNGSGEAE
ETSAEEQSSGDLGAEELCHCGRESSLLQELRFLKNKVEDLEDEKSQYERKLKATKSLMTQ
LLSLRLTVEQLQVEKQQWEENKRNLQAEISGLQHLLQCKNTEIENLQSQLLSRSPMSIDS
SEREELYRRRLNTKHQELLKLKAGMELLIAANDEKDRRIEELSLLLSQCRQFRDGKALFQ
QTPAPQASSEEDELSAAVKTKALTIKAHSEMTSGASSPLLACKKPDQKETESRSQLRNPS
SSQEDLKSEATQKPMIGTPVEPACSDEGSQSKPENGTCILIDGNKSDGSEPRSQEGSQDE
DINPKKAERAENPSARDASPTSSGVDSGEHSPVSQENMKNNKSIRKLWGKIRRTQPGGLG
PGDDLEPTEFRRGGFRATAGPRLARTPDSARSVRDMTVPFSNWTTEQVCGWLEDYGLGQY
VNLARQWVISGQTLLSATLQEFEKEMGIKHPLHRKKLQLALKSFNNKAMEKSSELDHIWV
TRWLDDIGLPQYKDQFHESRVDGRVLQYLTVNDLLFLKVTSQLHHLSIKCAIHVLHVNKF
NPHCLRRRPGDENKTSPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLIILEPRF
TSETLAMLLNIPPQKTLLRRHLTTNFNGLVGAQAQQEKREYANASGHTSLTTTAKVRPKK
LSFTNFSHLRKRRPDDSADYICPVEMGNAPVLNGAAHQL
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggatggagttatggaggggcttaagactattgttccagtgcatgagacaagctgtgtt
ccagttctgctggagtctgcagaccgccgtatgtctctgagggttctacagctggcagag
gatctaaaggatatcctggacactgagctctacaaggaggacaaggacagtctgaggaga
caagttcccaccactacagtgcacactctcttattgtgtctggataaaagtctggtcaac
ctgcaggcaaagggaaacaacgagagctatcaagaacggctctgtcgactcgagggagat
aaggaatcgcttgtgctacaggtgagtgtgttgacagaccaggtagaggctcaaggagag
aagatcagagacctggagaattccctcgaggagcaccagcacaagctaaactccacagga
gaaatgctgcaacaggagctactgagcaggactgcgctcgagtcgcagaaactagatctg
atggatgaggtttcctgtctgaaactgaagctggtgagcatggaggagaggcagaatcac
agcgcagagagacaacacaaagctgagagcgtagtgaatctgattagcgagctccaggag
cagatgtgtaggattcagcaagagctttgttgtaaggtccaggagaaaaaagctgcagag
atccaggaggacgaagaggccggtactgacgcttcgctgaacggatcaggcgaggctgaa
gaaacgtctgcggaggagcagagctctggagacttaggtgctgaggagctctgtcactgt
gggagagaaagtagcttgctccaggaactgaggttcctcaaaaataaagtggaggatctt
gaggatgaaaagtcgcagtacgagagaaaactgaaagctacgaagtctctaatgactcag
ttgttgagtctgaggctgacggtggagcagcttcaggtggagaagcagcagtgggaggag
aacaaaaggaaccttcaggcagaaatctcgggccttcagcacctcctgcagtgtaagaat
acagagatcgagaaccttcagtcgcagcttctctccagatctcccatgtctattgacagt
tcagagagagaggagttatacaggagaaggctcaacaccaaacatcaagagcttctaaaa
ttaaaagccggaatggaattattaattgcagccaatgatgaaaaggatcggcgtatagag
gagctttctcttctcctgagccagtgcagacaatttcgagatggcaaggccttgtttcaa
cagacgccggcaccacaggccagcagtgaggaagacgagctaagtgcagcagtgaagaca
aaagctctcactattaaagctcattcagagatgacgtccggagcgtcctctccgcttctt
gcatgcaaaaaacctgatcagaaggaaacggaatcccggtcgcagctgagaaatccgtcc
agcagccaggaagatctgaaaagtgaagcaacacaaaagcccatgatcgggactcctgta
gagcctgcttgctcagacgagggttctcagtccaaaccggagaacgggacgtgtatcctg
atagacggtaataaaagcgacggctcagagccgaggtctcaagagggcagccaggacgaa
gacattaacccgaaaaaggcagagagagcggaaaacccgagcgctcgcgatgcatcaccc
acgtcgtctggtgtggattcaggagaacattcccctgtctcacaggaaaacatgaagaac
aacaagagcatacgcaaactctgggggaagatcaggaggacgcagccggggggtctgggg
ccaggcgatgatctggagcccactgagtttaggagaggaggatttagagctacagctgga
ccacgactggctcgaacccctgattcggcccgctcagtccgagacatgacggtcccgttc
tccaactggaccacggagcaggtgtgtggttggctggaggactacggactcggtcagtac
gtcaacttggcacgtcagtgggtgatcagtgggcagaccctcctctccgccacgctgcag
gaatttgagaaggagatgggcatcaaacatccgctacacagaaagaaactgcagttggct
ctcaagtcgttcaacaacaaggcgatggagaaatcctccgagctcgatcacatctgggtc
acacgctggctggatgacatcggcttacctcagtataaggaccagttccatgagagcaga
gtggatggcagggtgctccagtatctcacagtgaacgaccttctgttcctgaaggtcacc
agtcagctccatcatctgagcatcaagtgtgccatccacgtcctccacgtcaacaagttc
aacccacactgcctgaggcgcagaccaggagacgagaataaaacctctccgtctgaagtg
gtgcagtggtccaatcaccgcgtgatggagtggctccgctcagtggacttggctgaatac
gctcctaatctcagaggcagcggcgtgcacggaggcctcataatcctggagcctcggttt
acctccgagacgttggccatgttactgaacatccctcctcagaaaaccctgctcaggcgc
catttaaccaccaatttcaacggtctggtgggagcccaggctcagcaggagaaacgcgag
tacgccaacgccagcgggcacacgtcactcaccactaccgctaaagtccggccaaagaag
ctcagcttcacaaacttcagccacctgaggaagaggaggcctgatgattcagcggactat
atttgcccagtagaaatgggaaacgcgccggttttgaacggggcggcccaccagctctag
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