Ictalurus punctatus (channel catfish): 108264609
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Entry
108264609 CDS
T04658
Name
(RefSeq) zinc-binding protein A33
KO
K12012
tripartite motif-containing protein 35
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108264609
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108264609
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
SPRY
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
U-box
PFam54_60
zf-RING_5
zf-RING_2
DUF4618
zf-Nse
Prok-RING_4
zf-RING_6
Fib_alpha
Golgin_A5
Motif
Other DBs
NCBI-GeneID:
108264609
NCBI-ProteinID:
XP_017321799
Ensembl:
ENSIPUG00000008115
UniProt:
A0A2D0QU07
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All DBs
Position
4:complement(28827637..28835793)
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AA seq
486 aa
AA seq
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MATRGSFSEADLLCPVCRHIYMDPVILSCGHSFCKVCLAKCWQKKKSFKCPSCKRQSSKL
LPPPNLNLKTMCDRFRLDKYESATPEMFCRLHNENLKLFCLEDKQPLCVVCRDSKLHSNH
RFRPLDEAAQEHREEVQSKLNPLQDNLESFLKAKRTCDLNIKYIKNQAQHTEKRIKSEFQ
KLHQFLQDEETKQISALKEELNEKCRMLNENFNFIANEIVQLSATIKSILEELATEDISF
LKNYKTALERTEYELKDAETESEPVIDVAKYLGNLQFKVWKKMKDMVEYYPVILNPNTAH
PCLNLSPDLTMFVFQDKYEQLPENPERYNYHLWVLGCEGLNSGTHCWEVKVENSVEWALG
VLTGSDGKDSTVRSYSASVWKSCYQNVTYGASATGGSTTILNLTKDLKRIRVQLDWDHGH
VSFSDPITGHNLKTFFYSFTDSVYPYFCNQCERYPLRILPADIFVSVEQSGHSTYHLACD
NTDSSA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaagaggatctttctcagaggcggacctcttatgtcccgtgtgccgccatatc
tacatggatcctgtcattttgtcttgtggtcatagcttctgcaaggtttgcttggcaaaa
tgctggcagaagaaaaaatcttttaaatgtccttcgtgtaagagacagtcttccaaactg
ttgcctccaccgaacctgaacttaaaaaccatgtgtgacagatttcgtctggacaaatac
gagtcagccacacctgagatgttttgcaggctgcataatgagaacctcaagctcttctgc
cttgaggacaaacagccgctgtgtgttgtgtgccgagactcaaagctacacagcaaccac
agattcagaccgctggacgaggcagctcaagaacacagggaggaggttcaatctaaactg
aaccccctgcaagacaacctcgagtcgtttctaaaggcaaaacggacttgtgatcttaac
ataaaatacattaagaaccaggctcaacacacagaaaagcgaattaagagcgagtttcag
aaacttcaccagtttctacaagatgaagagacgaagcaaatatctgcactgaaggaggag
ctgaatgagaaatgccgaatgttaaacgaaaacttcaactttatagccaatgagattgta
cagctttcagcaactatcaaatctatcctagaagaattagcgaccgaggatatctctttt
cttaagaactacaaaactgctctggaaagaactgagtatgagctgaaggatgccgaaaca
gagtctgaaccagtgattgatgtggcgaagtatctgggtaacctgcagtttaaagtgtgg
aagaagatgaaagatatggttgaatactatcctgtgattctaaaccctaacaccgcacac
ccgtgtctcaatctgtcgcccgacctgactatgtttgtgttccaagataagtatgagcag
cttcctgaaaacccagagagatataattatcatttgtgggtcctaggctgtgagggttta
aactcagggactcactgctgggaggtcaaggtggaaaacagtgtggaatgggctctaggt
gttctgactggctctgatggaaaagattctacagtgcgttcctacagtgcaagtgtatgg
aaaagttgttaccaaaatgttacgtatggtgccagtgccactggagggtctaccaccatc
ctcaatttgacgaaggacctgaagaggatcagagtgcagctggactgggaccacggacac
gtctcattctcagacccaatcaccggccacaatctaaaaacgtttttctacagttttacg
gacagtgtctatccatacttctgcaatcagtgtgaacgttatcctctgagaattttacca
gcggatatttttgtcagtgtagaacagtctggacacagtacatatcaccttgcttgcgat
aatacggactcttctgcttag
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integrated database retrieval system