Ictalurus punctatus (channel catfish): 108264640
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Entry
108264640 CDS
T04658
Name
(RefSeq) eukaryotic translation initiation factor 2A
KO
K15026
translation initiation factor 2A
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108264640
03012 Translation factors [BR:
ipu03012
]
108264640
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108264640
Translation factors [BR:
ipu03012
]
Eukaryotic type
Initiation factors
eIF-2A
108264640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_CDC20-Fz
WD40_WDHD1_1st
DUF5089
Motif
Other DBs
NCBI-GeneID:
108264640
NCBI-ProteinID:
XP_017321857
Ensembl:
ENSIPUG00000013822
UniProt:
W5U730
LinkDB
All DBs
Position
4:7754095..7762821
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AA seq
581 aa
AA seq
DB search
MAPPIPHLAVRGSDGTVLLRGPPNCEESPTFHRDERQSRYVTFSRDGTLFGWCNGEKVSV
ITVANGDLVKSFDLPKTTMLEFSPLNKILVTWKQYTKSQDNPQGEANLQLWDLQTGNCTK
AFYQKKLEGWCPGWADDESVAVRCVNNELHFFENNNFETIANKLHLQKVSDFALSPGNQP
SKVAVYVPGSKGAPSFVRLYQYPNFGGPTSALANKSFFKADKVTMLWNKRASAVLVTAST
EVDKTGASYYGEQTLHYLATNGDSAVVQLPKNGPIYDVIWSPNSSEFCVVYGFMPAKATV
FNLKCEPIFDFGTGPRNAAFYSPQGHILVLAGFGNLRGQMEVWDVKKYKQVSKPQAADTT
FFSWCPDGEHIVTATCSPRLRVSNGYKIWHYTGTVLYKQDTPAGKELWEVVWQPFLPGTF
PEKAVKYQAVASELGSTDAKPAQAYRPPALRNKPESSSTKLHEEEPPQNMKPGAGDKQMS
KAALKNQRRREAKKAAKQENKSDDVPTPPSEPPPTRQTPVESTHGDPETDKKIKNLKKKL
KAIEELKEQQAAGKQMQKNQLEKIQKEAQLLKELESLELGL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccataccgcacttagcagttcgagggtcagatgggacagttctgctccgc
ggaccaccgaactgtgaggaaagtccgactttccaccgagatgagcgacagagcagatat
gtgaccttcagcagggatggcactttgtttggctggtgcaatggggagaaggtcagcgtg
attacagttgcaaatggagatttggtgaagtcttttgatctaccaaaaaccacaatgctg
gaattttctcctcttaataaaatcctggttacatggaagcagtacaccaaatcccaagat
aatcctcagggtgaggctaacctccagctgtgggatctgcaaacaggcaactgtaccaaa
gcattttaccagaaaaaattagagggatggtgtccaggttgggcagatgatgaaagcgtc
gcagtgagatgtgtgaacaacgaacttcatttctttgagaataataacttcgaaaccatt
gccaacaaacttcatcttcagaaggtatcagactttgctctgtcaccaggaaaccagcca
agcaaggtcgctgtctatgttcctggaagcaagggcgccccttcttttgtccgactttat
cagtaccctaatttcggtggtcctacctcagctctagccaacaaaagctttttcaaggct
gataaagtgactatgctgtggaacaaaagagccagtgcggttctagttacagctagcaca
gaagtggataaaactggcgcatcgtactatggggagcagactttacactatctcgcaaca
aacggagacagtgcagtggtccagctcccaaagaacggccctatttatgatgtgatatgg
agccccaactcttcagaattctgtgtcgtttacggcttcatgcctgccaaagccacagtg
tttaacctgaagtgcgagcccatttttgactttggaacaggtccacgcaacgctgccttt
tacagcccgcagggccacatccttgtcctggccggctttggaaacttgaggggtcagatg
gaggtgtgggatgtgaagaagtacaagcaggtgtccaaaccccaggccgcagacaccacg
ttcttctcctggtgtcctgatggagagcacattgttacggcaacctgttcacccaggctc
agggtcagtaatggctataagatctggcactacaccggcacagttctgtacaagcaggac
acaccagcagggaaagaactctgggaggtggtctggcaaccattcttacctggaacattc
ccagagaaggcggtgaagtaccaggcagttgcaagcgagctcggcagcactgatgccaag
cctgcgcaggcctaccggcctcctgccctgcgcaacaaaccagagagcagcagcaccaaa
ctgcatgaagaggaaccaccacagaacatgaagcctggtgctggagacaagcagatgtcc
aaggcagctctgaaaaaccagagaagacgggaagcaaagaaagcagctaaacaggaaaat
aaatctgatgacgttcccactccaccttcagagcctccacccaccaggcagactcctgta
gagtctacacacggagatcctgaaactgacaaaaagattaagaacttaaaaaagaaattg
aaggctattgaggagttaaaggaacaacaagcagcaggcaaacaaatgcagaaaaatcag
ctggagaagattcagaaggaggcacagctgctgaaggagctcgagagcctagagttaggg
ctgtaa
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