Ictalurus punctatus (channel catfish): 108264684
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Entry
108264684 CDS
T04658
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu02010
ABC transporters
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108264684
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108264684
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108264684
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
108264684
Transporters [BR:
ipu02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
108264684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
DUF87
MMR_HSR1
FtsK_SpoIIIE
RsgA_GTPase
AAA_23
AAA_16
nSTAND3
T2SSE
Dynamin_N
NTPase_1
MeaB
ATP-synt_ab
nSTAND1
AAA_25
Motif
Other DBs
NCBI-GeneID:
108264684
NCBI-ProteinID:
XP_017321934
Ensembl:
ENSIPUG00000023141
UniProt:
A0A2D0QUE4
LinkDB
All DBs
Position
4:13818879..13848949
Genome browser
AA seq
1479 aa
AA seq
DB search
MQRSPVDDAGFLSRYFFWWTSPIMRKGFRKKLKTSDVYQTPSQDAADVLAERLEKEWDRE
VISAKKKPSLLRALSRCFIRPFILFGILLYLGEATKTVQPQLLGRIIASFDPCHEPEREQ
GYFLALGLGLLFITRFLLLQPAMFGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGQ
LVSLMSANLGKFDQSLGMAHFVWISPLQCILCVGLIWELIEFNSFCALAAVSLLGVIQAC
LSHKMGPYQAKRLLLTNKRLALTSEIMENLHSVKAYGWEEIMETIIKNIRQDEVKLTRKI
GSLRYFYSSAYFFSAIWVIMAAVLPQALTTNITVRRIFTTLSYCMVLRMTVTRQLPASIQ
MWYDTIRLIWKIEDFLSKEEYKLMEYDLSITDMELENITASWDEGIGELFEKIKQENKAN
GYPNGDGLFFTNLYVTPVLRNISLHLEKGEMLAVAGSTGSGKSSLLMTILGELVPSSGKI
RHSGRVSYSSQTAWIMPGTIRDNILFGLIYEEYRYSRVVKACQLEEDLAALPENDRTPLA
EGGLNLSGGQKARVALARAVYRDADTYLLDAPFTHLDIATEKEIFEKCLCRLMASKTRIV
VTNKIEHLKRADKILLLHNGECFFYGVFSELQSRRPDFSSLLLGLEAYDNITAERRCSIL
TETLRRVSVDETSGIRPDRPSYRQVAPPTYIDERKASVVINPLAADRKASFIQVIEEEAK
RPLPDRKFSLVPDYELVDESFMGNDVYHNHGVHMAGQRRQSVLAFMTNTQGRRDQLQSSF
HSRLSIVPHSELTSELDIYTRRLSKDSIYNITGEMDEENIEACFADKQIEDAFETTTWNT
YLRYVSTNKSLTYVLIFILIIYAIEVAGSVVGIFLITDEIWKEENPGSNATKQTNISLTG
TQYSVIARPSSSYYIIYIYVATSESILALGFFRGLPLVHTMITISKKLHQKMLSSVLRAP
MSVLNTMKTGRIMNRFTKDMATIDDMLPLLMFDLIQLTLVVLGCILVVSIMRPYIFLAAT
PLAIVFIVMRKYFLRTGQQLKQMETEARSPIFSHLIISLKGLWTIRAFDRQAYFETLFHK
VLNTHTSIWFLYLSTLRWFLFRADIIYFFFFTLAAWIAVGTNQDKSGEIGIIIALAMLIL
GTFQWCVVTSIAVDGMMRSVERVFKFIDLPSEEPKPRLGQRKASTLVIENPEACTDTCWP
SHGQMDIRNLTVKYTEAGHAVLKNLSFSVEGGQKVGILGRTGSGKSTLFNALLRLAYTDG
DMSIDGVSCYNMSLQKWRKAFGVVPQKVFIFTGTFRLNLDPCGCHSDKELWRVVEEVGLK
SVIEQFPDKLDFQLEYGGHVLSYGHKQLMCLARSILSRARILLLDEPSAHLDPITVKVLK
KTLRQSFSSCTILLCEHKVEPLLECQCFLMMEQGKVKTYESIQRLLNETSQLKQAMSPAE
RLKLFPRRNSSMRVPQPKLSSVTLTLQEETEDDIQDTRL
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgatcacctgtggatgatgctggcttcctttcgagatactttttctggtggaca
agccctattatgcgaaagggttttaggaaaaagctgaagacatcagatgtgtatcagact
ccatcgcaggacgctgcggacgtgcttgcagagcgtctggaaaaagaatgggacagagaa
gttatatcagcaaagaaaaaacccagtctcctacgagcactttcacgatgcttcattcga
ccctttatattatttggaatccttctctatttaggggaagccacaaaaactgtgcagccg
cagctcttgggccgaatcatcgcctcattcgacccctgccatgagccagagcgagaacag
ggctactttctggcactaggcctaggcctactgtttatcacccgcttcctcttgctgcag
cccgccatgtttgggctgcaccacctgggcatgcagatccgcattgcccttttcagctta
atttataaaaagacactaaagctgtccagtagagttttggacaagatcagtacagggcag
ctggtcagcctgatgtcagccaacctgggcaagtttgatcagagcctgggcatggcccac
tttgtatggatatctcctttgcagtgtatcctgtgtgtgggactaatttgggaactcata
gaattcaacagcttctgtgcccttgctgcagtctccctactgggagtcatccaagcctgt
ctttctcataaaatgggaccttaccaagcaaaaaggttactgcttactaataagcgtctt
gccctgacctcggagattatggagaatctgcactcagtgaaagcctatggctgggaggag
atcatggagaccatcatcaagaatatcagacaggatgaagtaaaactgaccaggaagatc
ggctcgctgcgctacttctacagctctgcctacttcttctctgctatatgggtgatcatg
gcagcagtgctgccccaagcccttaccacaaacatcaccgtgcgacgcatctttactact
ctctcatactgcatggtgctgcgcatgaccgtcactcgccagctgcctgcttctatccag
atgtggtacgacaccatcaggctcatctggaaaattgaggattttcttagcaaagaagaa
tacaaactgatggagtatgacctcagcattacagacatggaacttgaaaacatcacagct
tcctgggatgagggtattggtgagctctttgagaagattaagcaagagaacaaagcgaat
ggctatccaaatggagatggactcttcttcaccaacctctacgtaacacctgtgcttagg
aatatcagcttgcacttggagaagggtgaaatgttggcagtggctggatccacaggatcc
ggaaagagctccctgttaatgaccatcctgggcgagctggtcccttcctcaggaaaaatc
cgtcacagtggccgggtctcctactcttcccagactgcctggatcatgcctggcaccatc
cgagacaacatcctgttcgggctgatctatgaagaataccgctatagcagagtggttaaa
gcatgccaactagaggaggacctggctgctcttcctgagaacgataggacacctttggca
gaggggggactgaacctgagtgggggacagaaagcacgggtcgccctagccagggctgtg
tacagagatgctgatacctacctgctggatgcacctttcacacatttggatatcgctaca
gagaaagagatatttgagaagtgtctgtgcaggctcatggcctccaaaacccgcattgtg
gtcactaacaagattgaacacctaaaacgggctgacaagatcttgctgctgcacaacggt
gagtgttttttttatggcgtgttttcagagctgcagtcacggcggcctgacttcagctct
ttgttgctgggtctggaggcctatgacaacattactgccgagcgccgttgctccatcctc
actgagacactacgcagagtatctgtggatgaaacctcagggatacgtcccgatcgtccc
tcctaccggcaggtggctcctcccacctacatagatgagaggaaggcttcagttgtcatc
aatccacttgcggccgaccgtaaggcttccttcatccaggtgatcgaagaggaggccaag
cggccactgcctgaccgcaagttctccctggtgcctgactatgagctggtggatgaatcg
ttcatggggaacgatgtatatcacaaccacggcgtgcacatggcaggccagagaaggcag
tctgtgctggcctttatgaccaacacacagggtagacgtgaccagctccagtcttccttc
cacagtcgtctgtccattgtgccccatagtgagctgacctccgagctggacatctatacc
cgaagactgtccaaagacagtatctacaacatcaccggagaaatggatgaggagaatatt
gaggcgtgctttgcagataaacaaatagaggatgcttttgaaaccacaacatggaacacg
tatctcagatatgtatcgaccaacaaaagtctcacatatgttctgatcttcatcctcatc
atttatgctattgaggtggctggatctgttgttgggatttttctgataactgatgaaatc
tggaaggaggagaatcctggctcaaatgccaccaagcaaaccaacatatcactaactggt
acacaatattctgtcattgcccgaccttccagcagctattacatcatttacatctatgta
gcaacatcggagagcatcttagctctaggcttttttcggggactgcctctggtccacacc
atgatcaccatatccaaaaaactgcatcagaaaatgctgagttctgttctaagggcccca
atgtctgtccttaacaccatgaagacaggtcgtatcatgaacaggttcactaaggacatg
gctactatagatgacatgttgcctctgctgatgtttgaccttatacagcttaccctggtg
gtgctgggatgtattctggtggtgtccatcatgcggccgtacatttttcttgcagctaca
cccttggccattgtctttattgtgatgaggaagtactttctgcgcacaggtcaacagctg
aagcaaatggagacagaagctcgtagtcccatcttctcccatctcatcatctcactaaaa
ggactgtggacaatccgggcctttgaccggcaggcgtactttgaaactctgttccataaa
gtcctcaacacacacacatccatctggttcctctacctttccactctgcgctggttcctc
ttccgtgctgacatcatctatttcttcttcttcacgctcgctgcctggattgcagtagga
actaaccaggataaatcgggtgagattggtatcattatagctctggcgatgctcattctc
ggcaccttccagtggtgtgtcgtcaccagcattgcagtggatggaatgatgcgttctgtg
gagcgcgtctttaagttcatcgacctgccgtccgaggagcctaaaccaaggctgggtcaa
agaaaagcctcaaccctggtcattgagaacccagaggcctgcactgacacttgctggccc
agtcatgggcagatggacatacgcaacttaacagtcaaatacactgaggcaggacatgcc
gtgctcaagaacctctctttcagtgtggagggtggacagaaggtgggcatattgggcagg
acaggttctgggaaaagcacactattcaatgcactcctgcgtctggcttacacagatgga
gacatgtctattgatggcgtctcctgctataacatgtccctgcaaaaatggaggaaggct
tttggtgtggtgcctcagaaagttttcatctttactggaacatttcggttgaacctggac
ccatgtggatgccacagtgacaaggagctgtggagggttgttgaggaggtggggcttaaa
tcagtgattgagcaatttccagataagctggattttcagctggaatatggaggacatgtg
ctgagctatggccacaagcagctgatgtgtctggctcgatccatcctcagtagggcccga
atcttgctgctggatgaacccagtgcccaccttgaccccatcactgtgaaggtactgaag
aagacgctaaggcaatccttctcctcctgcactatcttactgtgtgaacacaaggtggaa
ccgctgctggagtgccagtgcttcctgatgatggagcagggcaaggtaaagacttatgag
tcaatccagcgcctgctgaacgagaccagccagctgaaacaggccatgagtccggccgag
cgcctcaaactcttcccacgccgcaactctagcatgcgcgtgccgcagcccaaactgagc
tccgtcacactcacactgcaggaggagactgaggatgacatccaggacactcgtctctaa
DBGET
integrated database retrieval system
