Ictalurus punctatus (channel catfish): 108264722
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Entry
108264722 CDS
T04658
Name
(RefSeq) nuclear pore complex protein Nup205
KO
K14310
nuclear pore complex protein Nup205
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108264722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108264722
03036 Chromosome and associated proteins [BR:
ipu03036
]
108264722
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108264722
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108264722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
Nup188_N-subdom_III
PSD5
GAIN_ADGRG2
Motif
Other DBs
NCBI-GeneID:
108264722
NCBI-ProteinID:
XP_053533871
Ensembl:
ENSIPUG00000014846
UniProt:
A0A9F7R2C2
LinkDB
All DBs
Position
4:8340097..8362160
Genome browser
AA seq
1971 aa
AA seq
DB search
MAAQMAVNSGASLWGPLKELWEIVEGAVWRRQPESVHLLDVQLKKHKPYFLSLFKNPPKS
AEQREKVRKASTEGIAIQGQQGARLLPEQLLTEAFILSDLFDLGELAALELLLAGEHQQP
HFPGLTRGLVAVLLYWDGKRCLANSLRSLIQSRHGKTFTLDLSADLVNLTTRFTDELMSH
GLTKQILNLVSEVSVTREFEKLQKERGLGNEKHRKEVSDLVRECRRSLAECLFAWTCQSP
LCKDDTLALIGHLETVTAEADGSLDSVNLALVMALLYCFDVSFLEQGTEDRDDLLQALPL
VTDRKYVSGVHSRVVADVTWKLPGLQALVRLAWALSLRAVSQLPQGAALVEFTEADEALA
DQAVLGGVFLFLTEGVLASEGFCEEEFYTRRLHALITDFLALMPMKVKQLRNRADEDSRL
IHMAMQMGSEPPSSLRKDLEHLMILIGEFYSKDSFGLELGVEFWCPSESLQHTSLTGSFL
GVALQRPPHKQVVLSKFVRQMGDLLPGTLYIPYLRMLKGLANGPQCSHYCFSLLKSNGAP
HGEKLQGGVSGCPVSWEHLFHSLMLYHENLRRDVPNADFTQYRHPPIRGITQRELEGLTA
FLQLLTTITTWCENARLALCEHPQWTPVVVMLGLLQCSVQPALKAHLLHALAAFGKSPEI
AASLWQSLEYTQILQTVKDPGQRQAAGIEVELNEIESSCEEYPLTRAFCQLISTLVESAL
PVNLGAGLRAPGFQPYLTFLRDSIFLPFPTRAYRRPAEKWEVAEAVLEVFHKLLQNYEPQ
PADFLQETVELQGKQVPAHKPPGHNLMFHLLNDSPTLSLCLSLLEEGVRQLDTYAPFPGK
KQLESAVLHCLSLLDLALQKEVLFMDLLRESQASMLVSPLEQLLQGVNVQSKRADHIINI
ARYLYHSSSNPDAAFLSAKILRHIARYSNIQSRLVGDFTHDQAISEKLMAGFVECLDNDE
AQEGVEKTDDSDPEKRVARIRHETQIHILNLLITSLELNGPNLGLYLLGYEVKKPVSSTN
LQDPGVLGCPRSCLHAILSLLQRGSERRSGPVLTQQAPHLAELCYQVIYQLCACADTSGP
TMRYLRTSQDFLFSHLKHLPFVIAGNEIAALNQMSWLMKTSAIELRVTSLNRQRSHTQRL
LNLLLDDQPHMQHADGEMGMEDESRSVSGFLHFDTVSKVRRKLLSVLDAINFSQEVPEQL
QLDFFERAQIEQVISNCEHVNEQGHTICNVKLLHRVLVAEINALQGMAAIGQRPLLLEEV
NSILQQVVERNRVRRSLSAKRHALQSWRSLVETILTACPAELIPADQRQLIIRDLLLDLH
DKVLSEDAAVELMPIVAGAVFTLTAHLSQSVLSEQQQGAGLEGGSSSGFASIANSALHLI
LRKLLDFILCTGGGFQRLRAHLYGSLLYYLQIAQKPEEPDTLQTGASMWERLTAPEDGFS
KLQRENLSIIESYGTALMEVVCRDACDGHEIGRMLALAVLDRVLSIDRQSQWLVYLCNSG
YLRVLVESLRQDDAALQTLLIPQPPLLKPLYIYESKMALLTRVAKTAQGAVELLCCGLVA
QLVECQVFHMLPENDSLRVFGQRDPSGFIPSPLERYRQILLPTLRLLQVILTSTTTHHQQ
GAAQVLHWLIVYSDTIQSVLHSQDVSMGSLQELSLLTGIISKTALPGALDFGQEVNSAAM
LEFQGHIGRFQRQCLSLLVRLAGTDRARYLKQMEESVAPGEPADKREGMELAMQQICANI
MEYCQTLLLQSSAEAQFTVCLFSPSASEPTDVAVPSVSRVPSLGLVLLLLKNSTTDFFRY
HDSHRQSLSKLERLEQLAPEELKELCQGLVSGSGAVEKIPSVQRSVLAKRRLVQLVNNRA
KLLALCSYIIETCLFVIWRHLEYYLLYCTPSNPKDSLLPGYRDVGVAGLGLSRVSQQDLE
QLQSDVASSFTEHLQRKLLEVEGLYSKSHSRHTFIQALTRRIRGLVRHTKS
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcagatggcggtaaattcaggagccagtctgtgggggcctctgaaagagttg
tgggaaattgttgagggggcggtgtggaggagacaacctgaaagtgttcatcttctggat
gtgcagttaaagaaacacaagccctactttctgtccctgtttaaaaacccaccaaagagt
gcggagcagagagagaaggtgaggaaagccagcacagaggggattgccattcaaggccaa
caaggtgcacggcttctacctgagcagctcctcacagaggccttcatcctgagtgacctt
tttgacctgggagagcttgctgcactagagctgctgcttgctggagagcaccagcagcct
cattttcctggattgacgaggggcctggtggctgttctactctactgggatggcaaacgc
tgcctggccaactctctccgctcgctcatccagtcacgtcatggcaaaactttcactctt
gaccttagtgcggatttggtcaatctgaccacgcgcttcacagatgagctgatgagtcac
ggtttgaccaagcaaattctaaacctcgtgtcggaagtcagcgtgacccgtgagtttgag
aagctgcagaaggagcgaggccttggcaatgagaaacacagaaaggaggtgtccgatctc
gtcagagagtgtcgccggtctctggccgagtgtctgtttgcatggacatgtcagtcaccc
ctttgtaaagatgatacacttgctcttattggccatctagagacagtaactgcagaagct
gatggctcgttggatagtgtgaaccttgcgttggtaatggcgttgctctactgctttgat
gtcagttttctggagcaaggcactgaagaccgagacgacttgctccaggccctccccctt
gtgacagacaggaagtatgtgtcaggggtacacagtcgggtggtggcggacgtgacgtgg
aagcttcccgggttgcaggcgcttgtgaggctggcgtgggcgctctcactccgagcggtg
tcacagctccctcagggtgcagcacttgtagagttcaccgaggccgatgaagcactggct
gatcaggcggttttgggaggagtcttcctcttcctgacagagggcgttctggcaagtgaa
ggcttctgcgaggaggagttctacactcggcgacttcacgcccttatcaccgacttccta
gctctcatgcccatgaaggtgaagcagttgcgtaaccgtgctgatgaagattctcgactg
atccacatggcaatgcagatgggcagcgagcctccatcttctctgcggaaagacctggag
cacctcatgatactgattggcgagttctacagtaaggactcatttgggttggagctaggt
gtggagttctggtgtccgtcagaatctttgcagcacacgtcacttacagggtcctttctt
ggtgtggccctacagcggcctcctcacaaacaggtggttctctccaagtttgtacgccag
atgggagacctgctgcccggcactttgtatatcccctacttgcgtatgttgaaggggctt
gccaacgggccacagtgttctcactactgcttcagtctgctgaagtccaacggagctccg
cacggagagaaattgcagggtggtgtatcaggatgcccagtgtcgtgggagcacttgttc
cattccctcatgctgtatcatgagaacctgagacgggacgttcccaatgcagacttcacc
cagtatcgccatccacccatcagaggcatcactcagagagagctagagggcctgactgct
ttcctccaactgctcaccaccatcacaacctggtgtgagaatgcacgtctagctctgtgt
gagcaccctcagtggactcccgtggtggttatgcttggtttacttcagtgcagtgtgcaa
ccggcactaaaagcccatcttctgcatgccctcgctgccttcggcaagtctccggagatt
gctgcctccctctggcaatctctggaatacacacagatcctgcagacagtaaaagatcct
ggacaaagacaagctgcaggcatagaggtggagctgaacgagatcgagtcgagttgtgag
gagtaccctctgacccgggccttctgtcagttgatcagcactctggtggagagtgcactt
cctgttaacctcggggcggggctgcgtgcaccaggattccagccctacctcactttcctg
agagactctattttccttccttttccaacacgagcttaccgtcgcccagctgagaagtgg
gaggtggcagaggcagtgttggaggtgtttcacaagcttctacagaactacgagcctcag
cccgctgacttcctgcaggagactgtggagctacaaggcaagcaggttccagcccataag
cccccgggacacaacctcatgttccacctgctcaatgactctcccaccctatccctctgc
ctcagcctcttggaggagggagttcgtcagcttgacacctacgctccctttcctggtaag
aagcagttggagtcagcagtgctgcactgcttgagtctgctggatctggccctgcagaaa
gaggtgctgttcatggatctgcttagagagagccaggcctcaatgctggtttctccacta
gagcagttattgcagggtgtcaatgtccaaagcaaacgcgctgaccacatcatcaacata
gccaggtatctgtaccacagcagttccaaccctgatgccgcgtttctgagcgctaagatc
ctgagacatattgcacgctactccaacatccagtccagacttgttggagacttcacccat
gaccaggcaataagtgagaagctgatggctggatttgtggagtgcctggacaacgatgag
gcccaggagggtgtggaaaagacagatgactctgaccctgagaagcgtgtggccagaatc
cgtcacgagacacagatccacatcctgaacctactgatcacgtctctggagctaaacggt
cctaacttgggcctctatttgttaggctacgaggtcaagaaacctgtctcgtcaactaat
ttacaggacccaggggttctcggttgcccacgtagttgcctgcatgcaatactaagtttg
ttgcagaggggcagcgagagacgttctggacctgtacttactcagcaagccccacacttg
gctgaactctgctaccaggtcatctaccagctgtgtgcatgtgcagacacctctgggcca
actatgcgctacctgaggaccagtcaggacttcctgttctctcacctgaagcacttaccc
tttgtcatagcagggaacgagattgctgcacttaaccagatgtcctggcttatgaagact
tcggctatagagctcagagtgacctcgttgaaccgtcagcgctcgcatactcaaaggctt
ctcaatcttctcttagatgaccagccacacatgcagcatgcagatggagagatgggtatg
gaggatgagagcaggtctgttagtggattcctgcattttgacacggtctctaaagtgcga
aggaagctactgagtgttttggatgctataaacttcagtcaggaggtgcctgagcagctg
cagctagacttttttgagcgtgctcagattgaacaggtcatctccaactgcgaacatgtc
aacgagcaaggacacaccatttgcaacgtcaagttgctgcacagagtcttggttgcagaa
atcaacgctctgcaggggatggctgctatcggtcagcggcctttgctgctggaggaggtg
aactccatcctgcaacaggtggtggaaaggaaccgtgtgcgacgcagcctgagtgccaag
cgccatgctctgcagagctggagaagtctcgtggagaccatcctcactgcatgccccgct
gaactcatcccagctgatcagagacaactcattatcagagacctgctcctcgacttgcac
gacaaagttttgtcagaggatgctgctgttgaattgatgccaatcgttgctggggcagtg
ttcaccttgacggctcacctcagccaatcagtgctgtccgagcagcagcaaggggctgga
ctggagggtggttcttcttcagggttcgcctctatcgctaactcggcccttcaccttatt
ctgaggaagctgctggactttattctatgcacaggtggaggattccagcgtctgcgtgct
catctgtatggctcgcttctctattacctgcaaattgcacagaaacctgaggagccagac
accttgcaaacaggagcgtctatgtgggagcggttaaccgcaccagaggatggtttctct
aagctgcagagagagaacctatccatcatagagagctacggcactgctctgatggaggtg
gtgtgcagagacgcctgtgacggccatgaaataggcaggatgctggctctggctgtgctg
gacagggtgttgtctatagacagacagagccagtggctggtctacctgtgtaacagcggc
tacctgcgcgttttggtggagagcctgaggcaggacgatgccgcactgcaaaccctgctg
ataccccaaccacctctgctcaaacctttatacatctatgagtccaagatggcgctgctg
acccgtgtggctaagacagcacagggagctgtggagttgttgtgctgtggtctggtggct
cagctggtcgagtgccaggttttccacatgctgcctgagaacgactcactcagagtattt
ggacagagagacccatcagggttcatccccagtcctctggagcgatatagacagatcctg
ctgcctaccctccgactcctgcaggtcatcctcacatctactactacacaccaccagcag
ggggcagcacaggtgctccactggctgattgtgtactcggacaccattcagtcagtcctg
catagtcaggatgtgagcatggggtcattacaggagctgtctctgctcacgggcatcatc
agtaaaactgccctcccaggggccctggattttgggcaagaggtcaacagtgcagccatg
ctggagttccagggacacattggcagattccagcgccagtgcttgtctctgcttgtgcgc
ctggctggaactgaccgcgctcgctacctgaagcagatggaagagagtgttgcccctggt
gaaccagcggacaaaagagaggggatggaactcgccatgcagcagatctgtgcgaacatc
atggaatactgtcagacgctgctcctgcaaagctcagccgaggctcagtttaccgtctgc
ctcttcagcccttcagccagcgaaccaacagacgtggcggtgccatctgtgtctcgggtg
cccagcctgggccttgtcctgctcctgctgaagaacagcaccacagacttctttagatac
cacgacagccacagacagagcttaagcaagctggagaggctcgagcaacttgctccagaa
gagctcaaagagttgtgccagggcctggtgtccggatcaggtgcagtggagaagatcccg
tcagtgcaaaggagcgtgctggccaaacggcgtcttgttcagctcgtcaataaccgtgcc
aagctactggcgctctgctcatacatcattgagacttgcctgtttgtgatctggcgccac
ctggagtactaccttctctattgcacacccagtaaccccaaagactcacttctgccagga
tacagagatgttggtgttgcaggtctgggcctgtccagggtcagccagcaggatctggag
cagttgcagagcgatgtggcgagcagcttcaccgagcacttacagaggaagctgctggag
gtcgaagggctctacagcaaaagccactcccgccacaccttcatccaggctctgacacgc
aggatccgtggcctggtgcgccacaccaagagctag
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