Ictalurus punctatus (channel catfish): 108264747
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Entry
108264747 CDS
T04658
Name
(RefSeq) C-C chemokine receptor type 5 isoform X1
KO
K04180
C-C chemokine receptor type 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03250
Viral life cycle - HIV-1
ipu03260
Virion - Human immunodeficiency virus
ipu04060
Cytokine-cytokine receptor interaction
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108264747
03260 Virion - Human immunodeficiency virus
108264747
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108264747
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108264747
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
108264747
04050 Cytokine receptors [BR:
ipu04050
]
108264747
04090 CD molecules [BR:
ipu04090
]
108264747
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Chemokine
CC Chemokine
108264747
Cytokine receptors [BR:
ipu04050
]
Chemokine receptors
CC Chemokine
108264747
CD molecules [BR:
ipu04090
]
Proteins
108264747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
108264747
NCBI-ProteinID:
XP_047007318
Ensembl:
ENSIPUG00000000551
ENSIPUG00000000563
UniProt:
A0A979E1W6
LinkDB
All DBs
Position
1:3977278..3983164
Genome browser
AA seq
402 aa
AA seq
DB search
MTFLNMTTEKNSDYGNLTNNSFSVCNNNIMDFSRVFLPTLYSIVFILGLIGNGLVLCVLV
KYHKSSNMSDLCLFNLAISDLLFLISLPFWAHYAAISEWTFGDFMCHAVTALYMLGFYGS
IFFMILMTIDRYTVIIHTYTSLFSKHRSVRSGIALALFIWALSLGASLPNIIFSQVKNES
HGWTCKEEYPEGSAWKPFSYIELNILGLIIPLSVMVFCYSRIIPILMTMKSQKKHKAVKL
MLVLVIVFFLFWTPYNIVIFLMFLHHLGYMSTCQWYQDLSMAMQWVETIAFSHCCLNPII
YAFVGQKFRNLFLKILKEWFPLCFGHCITTEFSERRTIRFLHTSVISSSKSNSILWKITV
LATRQKPHLMKSQLSLLICNNLHSLFHSYSRKTATWLRCTAM
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacattcctcaacatgacaactgaaaagaattctgattatggcaacctaacaaataat
agtttctcagtctgcaacaacaacataatggacttcagccgagtcttcctacctaccctt
tacagcatcgtcttcatcttggggttaattggcaatggcctggtgctatgtgtcctggtc
aagtaccacaaaagttccaacatgtcagatctgtgtctcttcaacctggctatttcagac
ctcctcttcctgatctcattgcctttttgggctcactacgctgccatctctgagtggacc
ttcggggacttcatgtgtcatgcagtgacagcgctctacatgctgggattctatggaagt
atcttcttcatgatcctcatgaccattgaccgctacactgtcattatccacacttacacc
tccctcttctccaagcaccggtctgtcagatctggcatagccctggctttgtttatatgg
gcacttagcttgggagcttctctgccaaacatcattttctctcaagtgaagaatgaatca
catggatggacatgcaaagaggaatatccggaaggatcagcgtggaagccattctcttac
attgagctgaacatcctcggcttgatcattcctctctcggtgatggtgttctgctactcg
cgcatcatccccatcttaatgacgatgaaatctcagaagaaacacaaagctgtcaagctc
atgctggtcttagtcattgttttcttcctattctggacgccctacaacatcgtcatcttc
ctgatgttcctgcatcacttgggctacatgagcacctgtcagtggtatcaggacctgagc
atggctatgcagtgggtggaaaccatagcgttcagtcactgctgcctcaaccccataatc
tacgcctttgtggggcagaaattcagaaatttatttctaaagatcctgaaagaatggttt
cctctttgctttgggcattgcataacaactgagttctcagagaggaggaccattaggttc
ttacacacctcagtgatttccagctcaaagtcaaattcaatattatggaaaataactgtt
ctggcaacaagacaaaagccccaccttatgaaatcacagctcagccttttgatatgtaac
aaccttcacagcttgtttcacagttactctcggaagactgcaacatggctgcgatgtaca
gcaatgtga
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