Ictalurus punctatus (channel catfish): 108264783
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Entry
108264783 CDS
T04658
Name
(RefSeq) LOW QUALITY PROTEIN: C-C chemokine receptor type 5
KO
K04180
C-C chemokine receptor type 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03250
Viral life cycle - HIV-1
ipu03260
Virion - Human immunodeficiency virus
ipu04060
Cytokine-cytokine receptor interaction
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108264783
03260 Virion - Human immunodeficiency virus
108264783
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108264783
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108264783
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
108264783
04050 Cytokine receptors [BR:
ipu04050
]
108264783
04090 CD molecules [BR:
ipu04090
]
108264783
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Chemokine
CC Chemokine
108264783
Cytokine receptors [BR:
ipu04050
]
Chemokine receptors
CC Chemokine
108264783
CD molecules [BR:
ipu04090
]
Proteins
108264783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
108264783
NCBI-ProteinID:
XP_017322140
UniProt:
A0A2D0QXB2
LinkDB
All DBs
Position
1:3970578..3972495
Genome browser
AA seq
355 aa
AA seq
DB search
MTFLNMTTKEYSDYDNLTNHIFPVCNNNIMDFSRXFLPTLYSIVFISGLIGNGLVLCVLV
KYHKSSNMSDLCLFNLAISDLLFLISLPFWAHYAAISEWTFGGFMCHAVTALYMLGFYGS
IFFMILMTIDRYTVIVHTYTSLFSKHRSVRAGIALALFIWALSLGASLPNIIFSQVKNES
HGWTCKEEYPEGSAWKPFSYIELNILGLIIPLLVMVFCYSRIIPILMAMKSQKKHKAVKL
MLVLVIVFFLFWTPYNIVIFLKLLHHLGYMSTCQWYQDLSMAMQWVETIAFSHCCLNPII
YAFVGQKFRNLFLKILKEWFPLCFGHCITTEFSERRTIRFSHTSVISSSKSNSIL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacattcctcaacatgacaactaaggagtattctgattacgacaacctaacaaatcat
attttcccagtctgcaacaacaacataatggacttcagccgtnncttcctacctaccctt
tacagcattgtcttcatctcggggttaattggcaatggcctggtgctgtgtgtcctggtc
aagtaccacaaaagttccaacatgtcagatctgtgtctcttcaacctggctatttcagac
ctcctcttcctgatttcattgcctttttgggctcactacgctgccatctctgagtggacc
ttcgggggcttcatgtgtcatgcagtgacagcgctctacatgctgggattctatggaagt
atcttcttcatgatcctcatgaccattgaccgctacactgtcattgtccacacttacacc
tccctcttctccaagcaccggtctgtcagagctggcatagccctggctttgtttatatgg
gcacttagcttgggagcttctctgccaaacatcattttctctcaagtgaagaatgaatca
catggatggacatgcaaagaggaatatcctgaaggatcagcgtggaagccattctcttac
attgagctgaacatcctcggcttgatcattcctctcttggtgatggtgttctgctactcg
cgcatcatccccatcttaatggcgatgaaatctcagaagaaacacaaagctgtcaagctc
atgctggtcttagtcattgttttcttcctattctggacgccctacaacatcgtcatcttc
ctgaagctcctgcatcacttgggctacatgagcacctgtcagtggtatcaggacctgagc
atggctatgcagtgggtggaaaccatagcgttcagtcactgctgcctcaaccccataatc
tacgcctttgtggggcagaaattcagaaatttatttctaaagatcctgaaagaatggttt
cctctttgctttgggcattgcataacaactgagttctcagagaggaggaccattaggttc
tcacacacctcagtgatttccagctcaaagtcaaattcaatattgtaa
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