Ictalurus punctatus (channel catfish): 108264800
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Entry
108264800 CDS
T04658
Name
(RefSeq) TBC1 domain family member 15
KO
K20168
TBC1 domain family member 15
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108264800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108264800
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108264800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
YddI
Motif
Other DBs
NCBI-GeneID:
108264800
NCBI-ProteinID:
XP_017322176
Ensembl:
ENSIPUG00000018954
UniProt:
A0A2D0QWP5
LinkDB
All DBs
Position
4:complement(11562431..11575378)
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AA seq
665 aa
AA seq
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MAGDMAATTPPKVIFEHEGVFIHSNTEESDDQDSLISGFLRIVDKDGETFVEYKPLEDTV
DLSNMLCACKDSSSVVEWTQRPHRPLDQQLSYETEWDMVNTVSFKRKVHTNGEGGSNHLN
ERNKWAFSFNVSELRTVTIKHEGWSYLIFCLRDDSTIPAIHFHQGGSQGFLDVLRKSVHL
SESPDDKNILLVSTYNKAISLSFENLLDDSNYGLVQKFKKDPYTTTLGGFSKVTNYIFDA
FRPTESECLQRPAEEVADILGELIPGLEINQQEEPGFEVITRVDLGTRPEVQRREPVMME
DWAKHQDSEGRVSNVPHLKHLIFKGGLCYAVRKEAWKFLLGYYPWDSTHEERKNLQKRKT
DEYFRMKLQWKSVSEEQEKRNSRLRDYKSLIEKDVNRTDRNNKFYEGLDNPGLILLHDIL
MTYCMYDFDLGYVQGMSDLLSPILFVMENEVDAFWCFVSFMDQMHENFEEQMQGMKTQLI
QLSTLLRLLDLAFWNYLEAQDSGYLYFCFRWLLIRFKRELYFQDVLRLWEVMWTGLPCQN
FHLLVCCAILDSEKQKIMDRHYGFNEILKHINELSMKLDVEEILIKSEAIYLQLKNCKDL
PHSVSEILGLNTVTESSTLETSEYSVLESPQISPRSAHRQDQACSNGHGLLQETSHNTCK
VGFIS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgacatggcggccacaactcctcccaaggtaatatttgaacacgaaggggtt
tttatccattcaaacacagaagaatcagatgatcaagattcactaatatctgggttcctt
cggatcgttgataaggatggtgaaacatttgtggaatataaacctttggaggatacagtg
gatctttcaaacatgctttgtgcctgcaaggactccagctcagtggttgagtggacacag
agacctcatcgtcctttagatcagcagctaagctatgagactgagtgggacatggttaac
acagtctcctttaagaggaaggtccataccaacggagaaggtggttcaaaccacttgaat
gagcgcaacaagtgggccttctcctttaatgtcagtgaactcagaactgttacaataaaa
catgaaggctggtcatacctaattttctgcttgagagatgactcaacaatccctgccatt
cacttccatcaaggaggcagccaagggttcttggatgtcttgaggaaatcagtgcatctc
agcgagagtcctgatgacaaaaacattctgctagtttccacatataacaaagcaatttca
ctatcctttgagaatcttctagatgactccaattatggccttgttcagaagtttaaaaaa
gatccctacacaacaactttgggtggtttctctaaagtcacaaactacatctttgatgca
tttcggccgactgagtctgaatgcctgcagcgccctgctgaagaagtggcagacattctc
ggggaactgatccctggcctggaaatcaaccagcaggaggagcctggttttgaggtcatc
accagagttgacttgggtacaaggccagaggtgcagaggagagagccagtaatgatggag
gactgggcaaagcaccaagactcagagggaagagtgtccaatgtgcctcatttaaagcac
cttattttcaaagggggcctgtgctatgctgtgagaaaagaagcttggaagtttttgctg
ggctattatccctgggacagtacgcatgaagaaaggaaaaatctgcagaaaaggaaaacg
gatgagtacttcagaatgaagctgcagtggaaatcagtcagcgaggagcaggagaagaga
aattccaggttacgggattataaaagccttatcgagaaagatgtaaacaggactgaccgc
aacaacaagttctatgagggcttggacaaccctgggctgatattgctgcatgacattctt
atgacgtactgcatgtatgactttgatttgggctatgtacaaggcatgagtgatctgctt
tctcccatcctctttgttatggagaatgaagtagatgccttttggtgctttgtctccttc
atggatcagatgcatgagaactttgaggagcagatgcagggcatgaagactcagctgatc
cagcttagcacattgctacggctcctagatttagccttctggaactacctggaggctcag
gattctgggtacctgtatttctgttttcggtggttactgatccgcttcaagagggaactc
tactttcaggatgtgctccgcctctgggaggtgatgtggacaggcttgccttgccagaat
tttcatcttctggtatgttgcgccattttggattcagaaaaacagaaaataatggacaga
cattatggatttaatgaaattcttaagcatataaatgaactctccatgaagttggatgtt
gaggaaatccttattaaatcagaggctatatatttgcagttaaagaattgcaaggatttg
ccccattcagtgagtgagattctgggcttgaacactgtcacagagagctctacattagaa
accagtgaatacagcgtgcttgaatcacctcagatctcaccaagatctgcacacagacaa
gaccaggcctgctccaatggccatggactcttacaagaaacatcacacaacacgtgtaaa
gtcggctttatttcctag
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