Ictalurus punctatus (channel catfish): 108264810
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Entry
108264810 CDS
T04658
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108264810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108264810
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
108264810
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
108264810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
zf_UBZ
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
108264810
NCBI-ProteinID:
XP_017322197
Ensembl:
ENSIPUG00000004781
UniProt:
W5UEI6
LinkDB
All DBs
Position
4:15601927..15616506
Genome browser
AA seq
991 aa
AA seq
DB search
MKRMSPKTGRSKSKAQARPLRRLSVANKDDKKGNAKLQKGPSITSFFKNTPPSKLACPLC
GKFVPRFKINEHLDSQCRDFLEENDIQATAACDNEQAKTSWPFSNNAPQSPDEEKNASIH
DNNQDAKTSPYFNKSGTTRQESPKKCSHAGEVKIVSLGRLSSKLSKKVLFFSEDSKIHST
QVSIKEEPILSEPSSSQKENFDENVCVKSEHLVMDSTLTSQVPTENLHCVEKIEQATPKE
NSLGPEASQTAETTASLRLMKRKKEESPGACIAPNMQKKTRYSLKRTAKSGSANPLPEVE
VGNSKCKDVERNQIMALDRGSDHPQDGSTSSVEHSSPRLPYYLQNFLTILGTVLENKDDR
VLFSEEELSSIQRFKQLSVPGQMLYVRLFQRKLKWLQVSKLDYAEISSDLSPVVQELVSS
RFLQTESELTEIQDVLDLLPAPELRSLAKTFHLGGPGNSSQKQQLVEGLLLLSKQRSLFS
LAPGQSNTGAIILKRAKQLAGSCVFLCRDPRAMFSRVFLLFSLTDTLEEEELASGGQGQL
YTILLVNSGRLAFPVYTVQRSAQVFRDREDLIRYEVAMRTLQEVITAMQAGCWEDALVLY
ASAKSNWQNLTQTYDLSWQEQLPVFLRCFTVGWAYTRILSRGVEILQRLRRYKDAVDELR
SLLTQSVFCPDSRGRWWDRLALNLQQHLKCHEQAIYAIRDGLNDPLVRTGHRLSLHQRAT
RMKESASFKKYRLLLRDLPSIHVHSVAHVTIRGQLFPHEGGMGKSVFLRPAAGHEGSGEG
GDAMVLCSVEELALAHYRELGFDQGIHGEGSTFSTLFGLLMWDIVFMNVLDVFRTSYQTC
PLDLYTDCFYKNRKEAIEARAELLSEASTETLQALLAEVWNSQEGRVCSLVNWERFSCLQ
QAQSLVACLGGQFLSGVVLRMSKDYRHSRGGLPDLVVWNTSNSSYKLVEVKGPNDRLSQK
QQIWLDELQKLGADVEVCHVTAIGARGARLE
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaatgtctcccaagactggtagaagcaaatccaaagcccaggccaggcctcta
agaagactttctgtagcaaacaaagatgataagaagggcaatgcaaaactgcagaaaggg
ccttctattacttcatttttcaagaacacaccaccttcaaaactggcttgcccgctttgt
ggcaaatttgtacctcgtttcaaaatcaatgaacacctcgactctcagtgtcgagacttt
cttgaggaaaatgacatacaggcaacagcagcctgtgacaatgaacaagcgaaaacatcc
tggcctttttccaataatgcccctcagagtccagatgaggaaaaaaacgcaagcatacac
gacaataatcaggatgcaaaaacaagcccatattttaacaagagtggcacgacaagacaa
gagtcacctaagaaatgttcccatgctggagaggtgaagatagtcagtcttgggcgtttg
tcttctaaactctccaaaaaagtgctgtttttttcagaggactccaaaattcacagcacc
caagtgtctatcaaagaagagcccatcttaagtgagccaagtagttcacaaaaagaaaac
tttgatgagaatgtatgtgttaaatcggaacacctagtgatggattcaacattaacttct
caggtaccaactgaaaatctgcattgtgttgaaaaaattgaacaggccacaccaaaagaa
aactcactgggtcctgaagcttctcaaacagcagaaaccactgcttcattgagattaatg
aagaggaagaaagaagagtctcctggtgcatgtatagccccaaacatgcagaagaaaaca
cgatattccttgaaaagaactgccaaatctggcagcgctaatccattaccagaggttgaa
gtcggcaattccaaatgcaaggatgtagaaaggaaccagattatggcactggatagaggt
agtgatcatccacaggatggtagtacctcctctgtggaacatagttcacccagactgcca
tactatctccagaacttcctgactattctgggaacagtgctggagaataaggatgacaga
gtgctcttcagcgaggaggaactctcatctatccagaggttcaagcagctgtcagtgcct
ggacagatgctatatgtgcgtctgtttcagaggaagttgaaatggctgcaagtgagcaaa
ctagattatgctgaaattagttcagacctcagtcctgttgtgcaagaacttgtctccagt
agattcctccagacagagtctgaactcaccgagatccaagatgtattggatcttctacct
gctccggagctccgaagtctggccaagacgttccatctaggaggtccagggaacagtagc
cagaaacagcagctggtggaagggcttctccttttgtccaaacagcgctctctcttttct
cttgcccctggccaaagcaacactggtgcaatcattctcaaaagggcgaaacagctagca
ggctcctgtgtgtttctttgtcgggatcctcgcgccatgttctctcgcgtctttctactc
ttctctcttactgacactctggaggaggaggaattggcatcaggtggtcaaggccaactt
tacactattctgctggtcaactctggacgtctggctttccctgtctacacagttcagagg
tctgctcaagtgtttagggacagggaagacttaatcagatacgaagttgccatgcgaacc
cttcaggaggtgattacagcaatgcaggctggctgctgggaggatgctctagtcctctac
gcttctgcgaaatcaaactggcaaaacttgacacaaacatatgacttaagttggcaggag
cagttaccagtgtttcttcggtgctttacagtaggctgggcatatacacgtatattgtct
cgaggagttgagatactacagaggctgcgtcgttataaggatgcagtggacgagctgcgg
tctcttctgactcagtctgtgttctgtccagacagcagagggcgctggtgggacagacta
gcgctcaatctccagcagcacctaaaatgccatgagcaggctatctacgccatcagggat
ggattgaatgatccactggtccggacaggtcaccgtttgtcactgcaccagagagccacc
agaatgaaggagtcagcgagttttaagaagtaccgcctgctgctccgagaccttccttct
atccatgtgcatagtgttgctcatgttacaattcgaggccaactttttccacacgagggc
ggtatgggcaaatccgtgttcctcaggcctgctgctgggcatgaaggctctggagaagga
ggtgatgccatggtcttatgttctgtagaggagctggctttggcacactacagagaactt
ggcttcgatcaaggcattcatggtgaaggctctacattctccactttgtttggccttctg
atgtgggacattgtcttcatgaatgtcttggatgtcttcagaacatcctatcagacatgt
cctctggacttgtacactgactgtttctataagaatcgaaaggaggctatcgaggcacgg
gctgaactgttgtccgaggcttccacagaaacactgcaggcgctgctggctgaagtctgg
aattcacaggagggaagagtttgttcacttgttaactgggagcgattctcttgtcttcag
caagcccagagcttagtagcatgtctgggaggacaatttttaagtggagtagtccttaga
atgtcaaaggactacaggcacagcagaggaggacttcctgacctggttgtgtggaacacc
tcaaatagcagctataagctggtggaggtgaagggccctaatgaccgtttgtcccagaaa
caacagatctggctggatgagctgcagaagctgggcgctgatgttgaagtgtgtcacgtc
actgctattggagctcgtggagcgcgattggagtag
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