Ictalurus punctatus (channel catfish): 108264917
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Entry
108264917 CDS
T04658
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b
KO
K14411
RNA-binding protein Musashi
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108264917 (msi1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108264917 (msi1b)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108264917 (msi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
108264917
NCBI-ProteinID:
XP_017322409
Ensembl:
ENSIPUG00000001976
UniProt:
A0A2D0QVS2
LinkDB
All DBs
Position
5:complement(726020..748730)
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AA seq
346 aa
AA seq
DB search
MDSDGTQSGSDSPHDPCKMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGF
GFVTFADQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTID
DVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKK
AQPKEVMSPAGSSRGRARVMPYGMDAFMLGIGMLGYPGFQAATYTGRSYTSITPGYTYQF
PEFHLERTPLLTSPHPPELTAIPLTAYNPMAAAAAAAAVVRGSAPSRSAGFLSTSSPGPM
AELYGTASQESTVSSYISAASPAPSTGFSHSLGGPLIATAFTNGYH
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacggcactcagagcggctcggattccccgcacgacccctgcaaaatgttc
atcggaggtctgagctggcagactactcaagagggtctgaaggattatttctgcaaattc
ggtgaggtgaaggagagcatggtgatgcgagatccggttacgaagcgctccaggggcttc
gggttcgtcacgtttgccgaccaggccggtgtggataaagttctggctcaaacccgacac
gagctggactccaaaacgatcgatccgaaagtggcattccctcgtcgagctcagcccaag
ctggtgaccaggacgaagaagatcttcgtgggcggattatcggtgaacaccaccatcgac
gacgtgaagcagtacttcgaccagttcgggaaggtggacgacgccatgttaatgttcgat
aaaaccaccaacagacacagaggttttggcttcgtgacgtttgagaacgaggacgtggtg
gagaaggtgtgcgagatccacttccacgagatcaataataagatggtggagtgtaaaaag
gctcagcctaaggaagtgatgtcaccggcagggtcctccaggggccgagcgagggtcatg
ccttatggcatggatgccttcatgctggggatcggcatgctgggttacccaggattccag
gcggcaacgtacaccggccgcagttacacctctatcactccaggatacacgtaccagttc
ccagaattccacttagagaggacccccctcctgacttcaccccaccctcccgaactcaca
gctatccctctgacggcgtataacccgatggcagcggcggcggctgcggcggctgtggtt
agaggctccgccccctctcgctctgctggctttctgagcaccagcagtcctggaccaatg
gcagagctttatggaacggccagtcaggaatccacggtgagcagttacatcagcgctgca
agccccgcccccagcaccgggttcagccacagcctcgggggtcctctgatcgcgacagcg
ttcactaacggctaccactga
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