Ictalurus punctatus (channel catfish): 108264980
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Entry
108264980 CDS
T04658
Symbol
asic1a
Name
(RefSeq) acid-sensing ion channel 1A
KO
K04829
acid-sensing ion channel 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108264980 (asic1a)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
108264980 (asic1a)
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Gene cluster
GFIT
Motif
Pfam:
ASC
PspC
DUF6297
Motif
Other DBs
NCBI-GeneID:
108264980
NCBI-ProteinID:
XP_017322498
Ensembl:
ENSIPUG00000014147
UniProt:
W5UC55
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All DBs
Position
5:32077474..32105101
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AA seq
495 aa
AA seq
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MDVKVEPAAETDGDHPPPLQVFALTSTLHGIAHIFSNERVTARCCLWLLFFLGSLGFLLY
VCVDRVQFYLEFPYVTKVDEIVAPAILFPAVTFCNLNAFRFSKVTRNDLYHAGELLAMLN
SRYEIRDVHLVEESVLEALKIKADFQNFKPRPFNMLEFYNRTGHDIRDMLLSCHFRGKPC
RPEDFKVVFTRYGKCYTFNSGESGPPLLSVKGGMGNGLELMLDIQQDEYLPVWGETDETS
FEAGIKVQVHSQSEPPFIDQLGFGVAPGFQTFVSCQEQRLVFLPPPWGNCKMNSPDSDFF
SAYSLSACRIDCETRYLVENCNCRMVHMPGDAPYCSPELYKVCADSALAYLVERDNEYCM
CETPCNTTRYSKELSFVKIPSKASAKYLAKKFSKSEKYITDNILVLDIFFEALNYETIEQ
RKAYEVAGLLGDIGGQMGLFIGASILTILELFDYLYEVAKYKLCRCSEKKHQNDSSDHDT
VMGRNDVKCHVSQFH
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaaagtggagccggctgcagagacagacggcgatcatccgcctcctctccag
gtgttcgctctgacgtccacgctgcacggtatcgctcacatcttctccaacgagagagtg
acggccagatgctgcctgtggctgctgttcttcctcggctccttgggcttcctgctgtac
gtctgcgtggaccgagttcagttctacctggagtttccgtacgtcaccaaagtggacgag
atcgtggctccggccattctgttccccgccgtcaccttctgcaacctcaacgccttccgc
ttcagcaaggtcacgcgcaacgacctgtaccacgcaggcgagctgctcgcaatgctcaac
tccagatacgagattcgggatgttcacctggtcgaggagagcgtcctggaggcactgaag
atcaaagctgacttccagaactttaagcctcgcccgtttaacatgctcgagttctacaac
cgaacgggccacgacatcagagacatgcttctctcttgccacttcagggggaaaccgtgt
cgacccgaagacttcaaagtggtgttcacacgctatgggaagtgctacacatttaactcg
ggtgagagcggtccaccactgctcagtgtgaagggtgggatggggaacggcctggagctc
atgctggacatccaacaggatgaatatttacctgtgtggggagaaacagatgagacgtct
tttgaagcagggatcaaagttcaggttcacagtcagtctgagccgccgttcatagatcag
ctgggttttggcgtcgctccgggattccagaccttcgtgtcctgccaagagcagcggctg
gtgttcctgccacctccgtgggggaactgcaagatgaattcgccggactctgacttcttc
agcgcttacagcctcagcgcgtgccgcatcgactgcgagacgcgctacctggtggagaac
tgcaactgccgcatggtgcatatgcctggtgacgccccgtactgcagccctgagctctat
aaagtgtgtgcagactcggcgctcgcgtacctggtggagagggataacgagtactgcatg
tgtgagactccgtgcaacaccacgcgctacagcaaggagctctctttcgtcaagatccct
agcaaagcctccgcaaaatacctcgccaagaaattcagcaagtccgagaagtacatcaca
gacaacattctcgttctggacatctttttcgaagctctgaactacgagaccattgagcag
aggaaagcctacgaagtagcaggactgctgggtgatattggaggacagatgggactcttc
attggcgcgagcattctcactattctcgagctctttgattatctgtatgaggtagcgaaa
tacaagctgtgtcgctgctcggaaaagaaacatcagaacgacagcagcgatcatgacacg
gtgatggggcgcaacgacgtcaaatgtcacgtcagtcagtttcattag
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