Ictalurus punctatus (channel catfish): 108264988
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Entry
108264988 CDS
T04658
Symbol
myo1f
Name
(RefSeq) unconventional myosin-If
KO
K10356
myosin I
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108264988 (myo1f)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108264988 (myo1f)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108264988 (myo1f)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108264988 (myo1f)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108264988 (myo1f)
04147 Exosome [BR:
ipu04147
]
108264988 (myo1f)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108264988 (myo1f)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Phagocytosis
Others
108264988 (myo1f)
Others
Actin-binding proteins
Myosins
108264988 (myo1f)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
108264988 (myo1f)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108264988 (myo1f)
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
108264988 (myo1f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
SH3_1
SH3_9
SH3_2
nSTAND3
IQ
NPHP3_N
AAA_16
AAA_22
ABC_tran
RapZ-like_N
Microtub_bd
IQCJ-SCHIP1
Sigma54_activat
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
108264988
NCBI-ProteinID:
XP_017322513
Ensembl:
ENSIPUG00000014471
UniProt:
W5UE74
LinkDB
All DBs
Position
5:32257972..32293445
Genome browser
AA seq
1092 aa
AA seq
DB search
MASKYHWQSQNVKQSGVDDMVLLSKITEDAIVENLKKRYLDDYIFTYIGSVLISVNPFKQ
MPYFTDREVELYQGAAQYENPPHIYALTDNMYRNMMIDSENQCVIISGESGAGKTVAAKY
IMGYISKVSGGGAKVQHVKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEP
DGGKISNFLLEKSRVVSQNENERNFHIFYQLIEGSSAQQKEALGIMTPDYYSYLNQSGTY
KVDGTNDSSDFHETMEAMHVIGIPEENQMQVQQIVAGILHLGNISFIEVGNYGQVESTDL
LAFPAYLLGIDQSRLQEKLTSRKMDSKWGGKSESIDVTLNQEQACYTRDALAKALYARLF
DYLVEAVNKAMQKPIEELSVGVLDIYGFEIFQRNGFEQFCINFVNEKLQQIFIELTLKAE
QEEYVQEGIKWTPIEYFNNKIVCDLIENKLNPPGIMSILDDVCATMYAKGEGADSTLLQK
LQAAVGTHEHFNNFNSGFIVHHYAGKVSYDVNGFCERNRDVLFTDLIALMQSSEHNFIRS
LFPENLNTDKKGRPTTAGSKIKRQANELVETLMKCTPHYIRCIKPNETKRPKDWEESRAR
HQVEYLGLRENIRVRRAGFAYRRVFHKFLQRYAILTPETYPHWRGSEQQGVLHLLRSVNM
DNDQYQMGRTKIFVKNPESLFLLEEMRERKFDTFARTIQKAWRKYIARRKYEQMREEASD
ILYNSKERRRNSINRNFVGDYLGMEERPELRQFLAKRERVDFADSVSKYDRRFKSIKRDL
ILTPKGIYLIGREKVKKGPEKGQIKEVLKRKLEIGTIRSVSLSTRQDDFFILHEAQYDSL
LESLFKTEFLSLLSKRYEEQTKSKLTLSFSDRLEFHVKKEGWGGGGSRTLMFSRGQGDVA
QIKPAGKTLNISIGDGLPKTAKPTRKSMQPSQGGRRPAPNRGYQNGAAQFPRGNAQPQEQ
TYSTPDKWNRPPNAALPKLDSQKAKRGTAAPHTQTSNLDFLNVPDQGMSGMQRKRSISQR
PPPAPSSRPKAAPRPQGPRCRALYQYNGQDVDELSFDAGDVIDLIKEDPSGWWTGRMRGK
EGLFPGNYVEKI
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaagtatcactggcagagtcagaatgtcaaacagagcggcgtggacgacatg
gtgctgctctccaagatcaccgaggacgccatcgtcgagaacctcaagaagagatacctg
gacgactacatctttacctacatcgggtccgtcttgatttcagtgaatccttttaaacag
atgccgtatttcacagatcgagaggtcgagctttaccaaggagctgcccagtatgaaaac
ccacctcacatctacgctttaacagacaacatgtacaggaacatgatgattgacagcgag
aatcagtgtgtgatcatcagtggagagagcggcgcaggaaaaaccgtggctgctaagtac
atcatgggctacatctccaaagtgtccggcggtggagctaaagttcagcatgtaaaagac
attatcctgcaatccaaccctcttctggaggcctttggaaacgctaaaacggtccggaac
aacaactccagccgctttgggaaatacttcgagatccagttcagccgaggaggagagccg
gacggagggaaaatctccaacttcctgctggagaaatcgcgagtcgtgagccagaacgag
aacgagaggaacttccacattttctaccagttgatcgaaggctcttcggcccagcagaag
gaagctttagggatcatgaccccagactactacagctacttaaaccagtcgggaacctac
aaagtggacggcaccaacgacagcagcgacttccacgagacgatggaagccatgcatgtg
atcgggatccccgaagagaatcagatgcaggtccagcagattgtagcaggaatcttacac
ctgggcaacatcagcttcatcgaggtgggaaactacggccaggtggagagcacagacctg
ctggccttccccgcctacctgctgggcatcgatcagagccggctgcaggagaaactcacc
agccggaagatggactccaaatggggcggcaaatccgagtccatcgacgtgacgctgaat
caggagcaggcgtgctacacacgtgacgctctggccaaggccctctacgctcgcctcttc
gactacctggtggaggccgtgaacaaagccatgcagaagcccatcgaagagctcagcgtc
ggagttctggatatttacggcttcgagatttttcagaggaacgggttcgagcagttctgt
ataaacttcgtgaacgagaaactgcagcaaatcttcatcgagctgaccctgaaggcagag
caggaagaatacgtccaggaggggatcaagtggactcctatcgagtactttaacaacaaa
atagtgtgtgatctcattgaaaataaactgaacccgccgggtataatgagcatcctggat
gacgtgtgtgccaccatgtatgccaagggcgaaggggccgacagcactttactgcagaag
ctgcaggctgcagtgggcacgcacgagcactttaacaactttaactctggctttattgtc
caccactatgcaggcaaggtgtcatacgacgtcaacggtttctgcgagagaaaccgagac
gtgctttttaccgacctcattgcgctgatgcagagcagcgaacataacttcatccgcagc
ctgtttcctgaaaacctcaacactgacaaaaaaggcaggccgaccaccgcgggctccaaa
attaaaaggcaggctaacgagctggtggaaacgctgatgaaatgcactccacactatatc
cgctgcatcaaacccaacgagaccaagaggcccaaagactgggaggagagccgggcgaga
catcaggtggagtatttgggtttgcgtgagaacatcagggtgcggagagccggcttcgcc
taccgacgagttttccataagttcctacagaggtacgccatcctgaccccggagacgtac
ccgcactggcgtggaagcgaacagcagggtgtcctgcatctgctgcgctctgtaaacatg
gacaacgatcaataccagatgggacgcactaagatcttcgtcaaaaaccccgagtcgctc
tttctgctggaggagatgcgggagaggaagtttgacacgttcgcccgaaccatccagaaa
gcctggaggaagtacatcgccaggaggaagtacgagcagatgagagaggaggcttcggac
attctctataactcgaaggagcgacgcaggaatagcattaacaggaacttcgtcggcgat
tacctgggcatggaggagaggcctgaactgcgtcagttcctggccaagagagagcgagtc
gactttgctgactctgtgagcaaatacgaccgcaggtttaagtcaattaaaagggatctg
atcctgacacctaagggcatctacctgatcggacgtgaaaaagtcaagaagggtccggag
aaaggccagatcaaagaagtgctgaagagaaaactcgaaatcggtaccatacgctccgtt
tcactgagcacgaggcaggatgacttcttcatcctgcacgaggctcagtacgacagcctg
ctggagtccttgtttaagactgagtttctgagcttgctgtctaagcgctatgaggagcag
accaagagcaaactcacactgtccttcagtgacaggctggagtttcatgtgaagaaggaa
ggatggggaggaggagggagccgcacgctgatgttttctaggggacagggagacgtggct
cagatcaaacctgcaggaaaaactctcaatatcagtataggagacggactacccaagact
gcaaaaccgacgagaaaaagcatgcagcccagtcaaggagggagacgaccggcccccaat
agaggttaccagaacggggcggcgcagttcccccgtgggaacgcacagccgcaggagcag
acctactccacaccggataagtggaaccggccgcccaacgctgcccttcccaaactggac
tctcagaaagccaagcgaggaacagcagccccccacacacaaacgtctaacctggacttc
ctcaacgtacctgatcagggcatgtctggaatgcaacggaagaggagcatcagccagcgt
cctcctccggcccccagcagccggcccaaagctgcgccgcgaccgcagggtcctcgatgc
cgtgcgctgtatcagtacaacggtcaggacgtggacgagctcagttttgatgccggtgat
gttatagacctcattaaagaagatccgtcaggctggtggaccggcaggatgcgtgggaaa
gagggcttattccctgggaattacgtggagaaaatctga
DBGET
integrated database retrieval system
