Ictalurus punctatus (channel catfish): 108265012
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Entry
108265012 CDS
T04658
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108265012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108265012
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
108265012
FA (Fanconi anemia) pathway
108265012
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RMI1_N_C
RMI1_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
108265012
NCBI-ProteinID:
XP_017322554
Ensembl:
ENSIPUG00000009057
UniProt:
A0A2D0QW73
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Position
5:5258262..5261822
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AA seq
649 aa
AA seq
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MPVDGGTQATQAWLRSTWHIQVPQAWLDACVEWVTEEAGGMALPQAQLNQQVLDQWLLTD
LRDLAHPVLPAGISEAEKMELNGCYCLQVDSLLDVSQPAYSQLQRVRGSRCSNDEVTAVT
QATQKPWEAKPTRMLMLQLTDGVQNLEGIEYRPVPALSANLPPGTKLQVVGMVMVRLGVV
LLKPENVKVLGGEVEELMEVHSQSRVLYRTLGLPEENHQQEAEDQEVRQGARIEGTLDSG
YESIQSSLNLQMISRNEPSHLENSRLSTLEAAPISRQSGTDVTNIPDEDFDNIPDDFMDY
PEDIGSNWQEDSNHGLDDWGNNPDDFSNGPEDFDDIPMEELDDLLSPTDSEILPSSRPVE
NGGTQQQDVSSSDYVQTDGQFNQPQASNHLRLPSKAHLTEANPVEVIEVDADDYFSPSPE
PKIARYESRLQVPANNYSKKADTTILNQSRPSNRLSLSSSIPLSEANPIEVIEIDSDDNS
SSSPGKKMARYEPKSQVPANNCSKKADTSILNYLCILKAGVWPPHSTQVVRLHAFIVTLL
GSLRSSGGEWKVRATISDGTGYLDVDLSDSLLANLIGFSAAESKVLRKDPAKRGVVDAGL
QNCQRELVDMCCVMSVQVDPNGTGMVLGADPLTDRECCEIQKRVTDRRS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacggtggtacccaggccacccaggcctggctgcgctccacatggcacatc
caggtgccccaggcatggctggatgcctgtgttgaatgggtaacggaggaggcaggtggc
atggccttgcctcaagcccagctaaaccaacaagttctggaccagtggcttcttacagac
ctccgtgacttggctcatcccgtcctgcctgctggcatttctgaggccgaaaagatggaa
ctgaatggctgctactgcctccaggtggactcgctcttggatgttagccagccggcctat
tcccagctccagcgtgtccgcggctctcgttgctccaatgatgaagtcacagccgtgacg
caggccacccagaaaccatgggaggcgaagccgactcgaatgctgatgctgcagctcact
gacggtgttcagaacctggagggcatagagtaccgacctgttccagctctcagtgccaac
ctgcccccaggcacaaagctgcaggtggtgggaatggtgatggtacgtctgggggtggtg
ctgctcaaaccggagaatgtgaaggttcttggtggagaagtagaggagctgatggaggta
cattctcagagcagggtgctctacagaaccttagggttgcctgaggaaaaccatcagcaa
gaagcagaagatcaagaggtcaggcaaggagcaagaatcgagggaaccctggacagcgga
tatgagagcattcaaagcagcctgaacttgcaaatgatcagcagaaatgagcctagtcat
ttagagaactctagattaagcaccctcgaagcggcacccatttctagacagagtgggaca
gatgtaaccaatattccagacgaggactttgataacattccggatgatttcatggattat
ccagaggacattggcagcaattggcaagaagactctaaccatgggctagacgactggggc
aacaatccagatgacttcagtaatggtccagaggactttgatgacattccaatggaggaa
ttggatgacctattgtcacctaccgattctgaaatcctacctagcagtagacctgtggaa
aatggaggaacacaacaacaggatgtttcaagttctgactacgtacaaacagatggtcaa
ttcaaccaaccccaagcatcaaatcatcttcgtttaccctccaaagctcacctcactgag
gcaaatccagttgaagttattgaagttgatgcagatgactacttctccccttccccagaa
ccaaagatagccagatatgagtccagattgcaggttcctgcaaacaactacagcaaaaaa
gctgacacaacaatcctcaaccaatcccgaccatcaaatcgccttagtttatcctccagc
attcccctcagtgaggcaaatccaattgaagttattgaaattgattcagatgacaactcc
tcctcttccccaggaaaaaagatggccagatatgagcccaaatcacaggttcctgcaaac
aactgcagcaaaaaagctgacacgtcaatcctaaactacctttgtattttgaaggctggt
gtttggccacctcatagtactcaagtagtgcggctgcatgcctttatagtcactctgctg
gggagcctgcgcagcagtggtggggaatggaaagtcagggccaccatatcagacgggact
ggatacctggatgtggatctatcagacagtttgctggcaaatctgattggcttctcagca
gcagaatctaaagttctaaggaaggatccagcaaagcgtggtgtggtggacgctggatta
cagaactgtcagagggagctggtggatatgtgctgtgtgatgagtgtgcaggtagatccg
aacgggacaggtatggtgctaggagccgacccactgacggacagagagtgctgtgaaata
cagaagagggtaacagacaggaggtcctaa
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