Ictalurus punctatus (channel catfish): 108265048
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Entry
108265048 CDS
T04658
Name
(RefSeq) rho guanine nucleotide exchange factor 16
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108265048
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108265048
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
IQ_SEC7_PH
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
108265048
NCBI-ProteinID:
XP_017322622
Ensembl:
ENSIPUG00000021551
UniProt:
A0A2D0QW23
LinkDB
All DBs
Position
5:7787945..7804557
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AA seq
667 aa
AA seq
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MSHRQSQTPTGDQSPLLLDNMLSSQLHLDCQADLSSSGTNLTVPEQPSRTPVILSTQSEA
ARKLGTQQLIPKNLAVTSRPKNRYHTTVVTLPVVREAQKNFQRFSHSPDLSWEDYDSDDG
GLNRNRRNKSYRAAVTSLDADLMWKQDLLQPVSEEKEKTPSPKPVSSPGRKRTLGRKRNQ
KHGGSFKDDPRLYQEIKERGLQSNNLGPDDDDFSQMPEEDQGIVVKNYKAAYMTWSQLPQ
VKEMGILETISPEERKRQEGIFEIMTSEYSYLHSLGILVRHFKSNEALRKTMTATEHHHL
FSNISTVHDISKRFFEDLERRHQINPVVQDISDIVQDHATNHFEPYIVYCSNETFQQRTL
QKLLASNTAFKEVLKQIESSPECGSLPMISFLILPMQRVTRLPLLMDTICQKTTKQTNEY
HAGRWALKAISKLVKSCNDGARRMERTEQMYTIQKQMDFGKIKPFPLISSSRWLLKRGEL
AIFTEEIGIFRKAFSHKSYYLFLFNDVLIVTKKKSEESYVVFDYATLENVEVEEEEEQAG
KLYLRLKPNSEGRCEQMALVAESKLDRARWVTALRWSKLGESSPNKDALPQYEATKAYMP
KEPDELNLQQAEIVIVLQEVDGWYYGERMRDGERGWFLASCATQITNRITIESNIQRMQR
LRKETNV
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaccgacagtcccagacacctacgggggaccagtctcctctccttctggacaac
atgctctcctcccagcttcacctggattgccaggctgatctttcgtcctcaggcacaaac
ctcactgtacccgagcaaccttcacggactcctgtaatcctcagcacccagagtgaagca
gctcggaagcttggaacccagcagctcatccccaaaaacctggctgtcaccagtcgacca
aagaaccgctaccacaccacggtggtcacgctgcctgtagtccgtgaggcccaaaagaac
ttccagcgtttctctcattctcctgacctctcctgggaggactatgacagtgatgatggt
ggcttgaataggaaccgcaggaacaagtcataccgagctgctgtcaccagtctcgatgcc
gatttgatgtggaaacaggatctattgcagcctgttagtgaggagaaggagaaaacgccc
agcccgaagccagtttccagccctgggcgcaaaagaaccttgggtagaaagaggaaccag
aagcatggcggatcctttaaggatgatccacgtttataccaggagatcaaggaacgaggt
ctccagtctaacaacctggggcctgatgatgatgacttcagccagatgccagaggaggac
cagggcattgttgtgaaaaactacaaggcagcatacatgacctggagccaacttcctcag
gtgaaggagatgggcattctagagaccatttcacctgaggagcgtaagcggcaagagggc
attttcgagattatgacatccgagtactcctacctgcacagcttgggcatcctggtgcgt
catttcaaaagcaacgaggctttgaggaagactatgaccgcaaccgaacaccatcatctc
ttctccaatatctctacagtccatgacatcagcaagcgattttttgaagatcttgaaaga
cgtcatcaaataaaccctgtcgttcaggacatcagtgacatagtccaggaccacgctacg
aatcactttgagccatacattgtgtattgctccaatgagaccttccagcagaggacacta
cagaaactacttgcatctaatactgcatttaaggaggtactgaaacaaatcgagagcagt
ccggaatgtggatcattacccatgatctccttcctcattctgcccatgcagagagtcacc
cgcctgcccctgttgatggataccatctgtcagaagaccactaagcagacgaatgaatac
catgcaggtcgctgggcgctgaaggccatcagtaagctggtaaagagctgtaatgacggt
gcccggaggatggagcgcaccgagcagatgtacaccatccagaaacagatggattttgga
aagattaagccgttcccgttaatctcatcctctcgctggctgctaaagagaggcgagctg
gccatattcacggaggagatcgggatcttccggaaggccttcagccataagagctactac
ctcttcctgttcaacgatgttctcattgttaccaagaaaaaaagtgaagaaagctacgtg
gtgtttgactatgccaccctggagaatgtggaagttgaggaggaggaggagcaagctggc
aagctctacctgcggcttaaacccaatagtgaggggcgctgtgagcagatggctctggtg
gctgaaagcaagctagacagagctcgctgggtcactgctctacgctggtctaaactagga
gagagttcccctaacaaagatgcacttcctcaatatgaagccactaaagcttatatgccc
aaagagccagatgagctgaatctccagcaagctgaaatagtcattgtcttgcaagaagtg
gatggttggtactatggggagaggatgagagatggagaaaggggctggtttctagccagt
tgtgctacacagatcaccaaccgcattaccattgagagcaacatccagcgaatgcagcga
ctgcgcaaggagaccaatgtctga
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