Ictalurus punctatus (channel catfish): 108265070
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Entry
108265070 CDS
T04658
Symbol
smyd1b
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1b isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00310
Lysine degradation
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108265070 (smyd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108265070 (smyd1b)
Enzymes [BR:
ipu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
108265070 (smyd1b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
108265070 (smyd1b)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108265070 (smyd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
108265070
NCBI-ProteinID:
XP_017322651
Ensembl:
ENSIPUG00000025054
UniProt:
A0A2D0QY24
LinkDB
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Position
5:complement(18112616..18119627)
Genome browser
AA seq
486 aa
AA seq
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MENVEVFDSPGKGRGLRATKEVWAGDVLFAEPCFASVVFDSFAAHVCHNCFRRQQKLQRC
GQCRFAQYCDRTCQRAAWEEHKNECAAIKSHGKVPNENIRLAARIMWRLDKDGGVISDLQ
LITLDDLEDHISDIPEIDLKELKVDIHNFLDYWPRTCKQHTVDSISHIFGLINCNGFMIS
DHKGLQAVGVGLFPNLCLVNHDCWPNCTVILNNGNHSAISTMYHTQKRIELRALVKITVG
EELTVAYVDYLNLSEDRKRMLKQQYFFDCTCDHCTNKTNDDLKMAGAEVDGVKVPDEKVK
EITEYSQEMLKKMEKARIDANYNEVVKICRECTEKQENVLADTHIYQLKMWSTLSEVLSY
LQFFEEAAIYSRKMVDGYMKLYNPNNAQLGMATMRAGVTHWQAGQIEVAHSMICKAYAIL
MVTHGPTHPITKDLEAMRMQTEMELRMFKQNEYIYHTMREAALKNQPVQMMSEPIEEGIK
SLFRKK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgtggaagtgtttgactcaccaggaaagggacgtggtttaagggccacaaag
gaagtatgggctggggatgttctttttgcagaaccttgctttgcttctgttgtctttgat
agttttgcagctcatgtgtgtcacaactgcttccgtcggcagcagaagctgcagcgttgt
ggccaatgtcggtttgcacagtactgcgatcgcacatgtcagcgtgcagcctgggaagaa
cacaaaaatgagtgtgctgccattaagagccatggcaaagtgcccaatgaaaacatccgt
cttgctgctcgtattatgtggcgtcttgataaggatggtggtgtgatctcagaccttcag
ctcattacactggatgacctggaagaccatatctcagacatccctgagattgatctgaag
gagctcaaagtagatattcacaacttcttggattactggcccagaacatgcaagcaacac
actgttgacagcatctcacacatctttggattgatcaattgcaatggcttcatgataagt
gatcataaaggcctgcaggcggtgggtgttggtctcttccctaacctctgtctggtcaac
catgactgctggccaaactgcacagttatcctcaacaacggcaatcactctgccatcagt
actatgtatcatactcagaagagaattgagctacgggccctggttaagatcactgtgggg
gaggaattgactgtggcatatgtggactacctgaatctgtctgaggaccgcaaacgcatg
ctaaagcagcaatacttctttgactgcacctgtgatcattgcaccaacaaaactaatgat
gacctgaagatggctggtgcagaagtggatggagttaaggtaccagatgagaaggtgaag
gaaataacagaatatagtcaggagatgctgaagaaaatggagaaggcccgtatagatgca
aactacaatgaggtggtaaagatctgccgagaatgtacggaaaagcaggaaaacgtcctt
gctgatacccacatctaccagctaaagatgtggagtacactcagtgaggtcctttcctac
ttgcagttctttgaggaggcagctatctattcacgcaagatggtggatggatacatgaaa
ctatacaatccaaacaatgcccaactaggcatggctacaatgagagcaggagtgactcac
tggcaggctgggcaaatagaggtggcacatagcatgatctgcaaagcatatgccattctc
atggtgactcatgggcccacacatcccattactaaggacttagaggctatgcgcatgcag
acagagatggagctgcgaatgtttaagcagaatgagtacatttaccacaccatgcgtgag
gcagcgcttaaaaaccagcccgtacagatgatgtcagagccaattgaggagggtatcaag
agtcttttccgcaagaagtga
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