Ictalurus punctatus (channel catfish): 108265104 Help Entry 108265104         CDS       T04658                                  Symbol si:dkey-21p1.3 Name (RefSeq) collagen alpha-1(I) chain Organism ipu  Ictalurus punctatus (channel catfish) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI TRAUB Motif Other DBs NCBI-GeneID:  108265104 NCBI-ProteinID:  XP_017322707 UniProt:  A0A2D0QWB2 LinkDB All DBs Position 5:34315922..34348151 Genome browser AA seq 1563 aa AA seqDB search MFSCFALFLLTLKETMKRDESQPVSHFTQHEHPEPTNEEFNAEPPPTGLELAFGSGLDSG RDEGVRNDTDGAPGTNVTSPNHQNCQVLEYSKVKGQPLSEHSVPPQPSAPAITSEEERSA GRSITAAPCSHAGVQENVTAKNISSDAAMETGDDITPDNKGMPSGAMQPSTDEMDDKKSH QPDVASSKGKKIKEEAIKRNESFMLPEPKSCDPRTEVCPNRTGGEPATPTLRDQHLIGPP GSTGLQGYQGRPGLPGAPGPKGEKGFAGRMGRTGRAGSRGPIGPPGIPAIIVWMTSEEEW QEFKKSKLYKKLMESWPRQKGQPGPMGRPGDPGPPGHLGVPGKQGKKGVTGSIGRVGPPG IPGPPGRPGQDGTPGKDGETGQPGPRGENGPQGYRGERGSKGELGEWGYTGEPGPQGEKG RNGVKGYKGEVGLIGIIGYIGPPGPRGQRGIMGAHGSPGEPGWPGFTGAPGPTGRTGPRG AKGLSGVKGPPGQPGESGARGEAGKAGDPGPDGITGFHGHGGPQGKPGRGGPPGPKGHPG QIGDEGAIGDPGPPGPPGHAGKVGKPGPSGDPGQKSERGDKGDPGEKGEQGSVGPPGFPG FRGRAGRSGVLGEPGPTGSAGSPGPQGLEGGAGDQGKQGRDGPKGERGPDGVTGVPGPRG DKGRPGRGGFSGLPGPLGQMGKSGERGPEGEPGIKGRTGFPGGPGAKGLKGLQGFPGIRG QDGIHGSPGLTGALGANGATGPSGHRGFQGKPGAPGVQGPVGKSGDQGSRGIAGKPGKPG VQGIEGTEGPKGLPGSPGQKGVRGNKGPKGKPGRPGARGLPGVKGYRGLPGVQGNMGVWG KIGLQGPPGDQGPRGPAGAVGVPGYPGKDGPAGALGPQGEKGDKGVKGAAGADGVSGVDG EEGAVGIIGPVGPLGFKGAPGEKGGSGFPGAPGLKGVRGERGHRGPAGIKGMTGREGQSG LQGQSGEQGPPGEKGRSGSRGRPGSAGKYGPGGKTGPDGTKGDKGEHGLIGEMGILGRPG PAGEPGLSGLIGNRGLAGSNGPQGLKGDSGERGKPGAQGEDGPAGIEGLRGKKGETGQRG KHGPVGPLGPKGPPGEKGTPGPPGPPGNTGVKGHAGAKGEMGLPGYRGTKGVAGKPGVQG LNGKRGSRGNPGKPGLSGTDGLLGVQGNEGDPGDRGHRGAPGRPGEPGRPGPAGASGLQG KRGVTGIKGSSGETGEPGPSGPVGPRGIPGLRGEKGHVGLPGQKGISGIPGIPGPVGTPG PKGKRGVAGPKGQPGPKGAQGDTGPSGPPGQLGLPGLAGILGKKGPKGVRGSSGLKGTKG QRGEPGKPGPPGPRKTEQSTTEKNRRGSRNTNRFKSQRSHRSENAVHAHAEDRLRGTRER PASTCRDLALHHPHLQDGFYYVDPNHGCPFDALQVFCNFTAGGLTCISPVQSQFVGTRRV KTGNASRWISDMQRGFWVEYWQLDVVQLRFLRLHSGSATQTLTTSCSSAPRLTAGQVHFL GDSGSEVSFSSAVYSRNSCEVQIRFSGKGEKMNLLPIRDLRLSEGEKQQETSFTAEIGPL CFL NT seq 4692 nt NT seq  +upstreamnt  +downstreamnt atgttttcctgttttgctcttttcttgctgacgctgaaggagacgatgaagagagacgaa tctcagcctgtctctcatttcactcagcacgaacatccggaacccacgaatgaggagttt aacgcagaaccgcctcctacaggcctggagttagcgttcggctcaggtttagactctgga cgcgatgaaggcgtgaggaacgatacagacggcgcgcccgggacgaacgtgacctcgccg aatcaccagaactgccaagtgctcgaatattcaaaggtcaaaggtcaacccttgtcggaa cactcagttcctccacaaccatcagcgccagctataacttctgaagaggaacgttcagct gggagatcgattacagcagctccgtgcagtcatgccggggttcaggaaaacgtgacagca aagaacatctcatcagacgctgccatggaaactggtgatgacatcaccccggataataaa ggtatgccatcaggggccatgcagccaagtacagacgagatggatgacaaaaaatctcac cagccagacgtggcgtcatcaaaagggaagaagatcaaagaggaagcgattaaaagaaat gagagttttatgctaccagaaccgaaaagttgtgatccgaggactgaagtctgtccaaac agaaccggaggagaaccagccacacccacactgagagatcagcatctcattggtccacct ggaagcacagggctacagggatatcagggtcgtcctggtctgcctggagctccaggacca aaaggagaaaagggctttgcaggaaggatgggtcgtacaggacgcgcaggttcccgaggg ccgatcggtcctcccggcattcctgccatcatcgtgtggatgacatcggaggaagaatgg caggagtttaagaagagtaaactctacaagaagctcatggagtcatggccgagacagaaa ggacaaccaggaccgatggggcgacccggagatcctggcccgcctggtcatcttggcgtt ccagggaaacagggcaagaaaggagtcacagggtcaattggaagagtggggccacctggg atacctggacctcctggaagaccaggccaagatggcacaccaggaaaagacggagaaacg ggccaaccgggaccacgaggggaaaacggtccacagggctacagaggagagcgaggcagt aaaggggagctgggtgagtggggttacactggagaaccgggacctcagggagagaaaggc aggaacggggtgaagggatataaaggggaagttggcctgattggaataattggctatatt gggccacctggaccgcgaggacagcgggggattatgggagcacacggttctcctggagaa cctggatggcccgggtttacaggagctccaggtccaacaggtcgtacgggaccgagaggt gctaaaggactgagtggagttaaaggacctcctggtcagcccggtgagagcggagcgaga ggagaagccgggaaagcaggagatccaggtcccgatggcattaccggatttcacggacat ggcgggccgcagggtaaaccagggcgaggtgggcctccgggtcccaaaggacatcctggg cagattggagacgaaggagccattggagacccgggaccaccgggaccgccaggtcatgct ggaaaagtgggaaaaccaggaccctcaggtgatccaggtcagaaaagtgagcgaggagat aaaggagatcctggtgaaaaaggagaacaaggttctgtaggtcctcctggttttcccggg ttccgtggtcgagcgggtcgttcaggtgtgctgggagaacccgggccgactggatcagct ggatcaccaggaccacaaggtttggaaggaggtgctggagatcagggcaaacaaggcaga gacggccccaagggagaacgaggtcccgatggtgtaactggagttccgggaccaagaggt gataagggtcggccgggacgcggtggattcagcggtctgccaggacctttggggcaaatg ggaaaatcaggagagcgaggacctgaaggagagcctggtatcaagggtagaacaggattt ccaggaggacctggagctaaaggcctgaagggactgcagggttttccagggattcgaggg caggatggaattcatggttctccgggactcacaggagcactaggggcaaatggagcaacg ggtccttcaggacacaggggtttccagggaaagccgggcgctcctggtgtacaaggtcct gttgggaaaagtggagatcagggaagtagaggaatcgctggcaagcctggaaaacccgga gtgcagggaatcgaaggcactgagggtccgaagggacttcctggcagtccagggcagaag ggagttcgaggaaacaagggtcccaaaggaaaacctggacgtccgggagctcgaggtctg ccaggagtgaagggttacagaggacttcctggtgtacaggggaacatgggtgtgtggggt aagatcggactccaggggccaccaggagatcaagggcctcgaggaccagctggagctgta ggggtgcctggatatccgggtaaagatggaccagcaggagctttagggcctcaaggagaa aaaggagataagggcgttaaaggggcggcgggagcggacggagtgtccggtgtcgatggt gaggagggcgcggtcggaatcatcggaccggtcgggccgctgggatttaaaggagcaccg ggtgaaaagggaggttctggatttcctggagcccctggattaaaaggcgtcagaggagaa agaggacatcgaggaccagcgggaataaaaggcatgactggacgagagggacagagtggc cttcaagggcaatcgggagagcagggaccacccggagaaaagggtcggtctggctccaga ggacgtccgggttcggcgggtaaatatggaccaggcggtaaaaccggacccgatggtaca aagggcgataaaggtgaacatggacttattggcgagatggggatcctggggcgtccaggt cctgcaggtgaaccaggattatcaggtttaataggaaacagaggtcttgctggaagcaac ggaccccaggggctgaaaggagattctggtgaacgaggaaaacctggagcgcagggggag gacggacctgcaggtattgaagggttgcgaggaaagaaaggagagaccggacagcgaggc aaacatgggccagtgggacccctgggacctaaagggcctcctggggaaaaaggcacaccg ggacctcctggacctccaggtaacacaggggtcaaaggtcacgcaggagcgaagggggaa atgggacttcctggatatagaggcaccaaaggcgttgctggaaaaccgggagttcaaggc ttgaacggaaaacgtggctctcgtgggaatccaggaaaaccaggcctcagtggcactgac ggtttactgggagttcaaggcaatgagggagatccgggtgacagaggacatagaggagct ccaggaagaccaggagagcctggcagaccaggtccagcaggagcttctgggcttcagggg aaacgaggagttactgggataaagggttcctcaggagaaacgggagaacctggaccttct ggacctgtcggaccaagagggattcctggactcagaggtgaaaagggacacgtcggactt ccaggacaaaagggaatttctgggatcccgggaatcccaggacctgtcgggacaccagga ccgaagggaaaacgaggtgttgcaggacctaaaggccagccgggtccaaaaggtgcacag ggtgatacaggtcccagcggtcctcctggtcagctcggccttcctgggctcgctggaatt ctagggaagaagggaccgaagggcgtgcgaggatcctcagggctgaaaggaacgaaagga cagagaggagaaccggggaaaccaggacctcctggacctcgaaaaacagaacagagcacc acagagaagaacagaagaggatcacgaaatacaaacagattcaaatctcagagaagtcac agatctgaaaacgccgttcacgcgcacgcagaggatcggcttcgaggaactagagagcgt ccggcgtctacctgcagagacctggctctccatcaccctcacctgcaggacggattttat tacgtggatccgaatcacggctgcccgtttgatgcgctgcaggttttctgtaattttaca gccggtggactcacctgtatctcacctgtccaatcacagtttgtaggaacgcggcgtgtg aagacagggaacgcatcacgctggattagtgacatgcagaggggcttctgggttgaatat tggcagctcgacgtcgttcagctgagatttctgcgtctccacagcggttctgctacacaa accctcaccacttcctgttcctctgctccacgcctcacggcaggacaggtacacttcctg ggagactctggaagtgaagtcagtttctccagcgctgtttactcgaggaacagctgcgag gtgcagatcagattttcaggaaaaggagaaaagatgaatctgcttcccatcagagatctg cgtttatctgaaggagaaaaacagcaagaaaccagcttcacagctgagattgggcctctg tgctttttatag

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