Ictalurus punctatus (channel catfish): 108265105
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Entry
108265105 CDS
T04658
Name
(RefSeq) gamma-aminobutyric acid receptor subunit delta
KO
K05184
gamma-aminobutyric acid receptor subunit delta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108265105
04082 Neuroactive ligand signaling
108265105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108265105
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108265105
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108265105
NCBI-ProteinID:
XP_017322708
Ensembl:
ENSIPUG00000024293
UniProt:
A0A2D0QWB3
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Position
5:complement(9391564..9429746)
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AA seq
446 aa
AA seq
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MEMTFFLSTVFSLILVGNELARAMLNDIGDYVGTDIEISWLPNLDDLMKGYARNFRPGIG
GPPVNVAMAIEVASIDHISEANMEYTMTVFLRQSWRDDRLSYNHTNKTLGLDSRFVDKLW
VPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSSRITSTAACDMDLTKYPMDEQECML
DLESYGYSSEDISYYWSDSQKHIHGLDKLELSQFTITDYSFITEMMNFKSAGRFPRLSLH
FRLRRNRGVYIIQSYMPSILLVAMSWVSFWISQSAVPARVSLGITTVLTMTTLMVSARSS
LPRASAIKALDVYFWICYVFVFAALIEYAFAHYNADYSKQEKAKVKVKKTAESMVKNGKQ
AMVLFSLSVTGMNQGFVVSNRQNRAQSETPVEPPEEVEMAKQESSEERKCCKCKPIDADT
IDIYARAVFPFTFAVVNVIYWVAYTM
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgacgttctttctttcgacggttttctcactgatcctcgtggggaacgaattg
gccagggccatgctgaatgacattggtgactatgtaggtacggatattgagatttcctgg
ttgccaaatctggatgatttaatgaaaggctatgctcgaaactttcgtccagggatcgga
ggacctccagtgaatgttgccatggctattgaagtagccagcattgaccatatctcagaa
gccaacatggaatataccatgactgtgtttctgcgtcagagctggcgagacgatcgcctt
tcttacaaccacacgaacaagaccctggggctggacagccgttttgtagataaactctgg
gttccagacacgtttatagtcaatgccaaatcggcctggttccatgacgtcactgttgag
aacaagctcatacggctacagcctgatggtgtcatcctctacagcagtcggatcacatcc
acagcagcctgtgacatggacctaaccaagtacccaatggatgagcaggagtgcatgctg
gaccttgagagctatggctactcttcagaggacatcagttattactggtcagacagccag
aaacatattcatggcctggacaaactggagctgtcccagttcactatcacagactacagc
tttatcactgagatgatgaactttaaatcggctgggcgattccctcggctcagtttgcac
ttccggttgcggcggaatcgaggagtgtacatcatccagtcctacatgccctctatcctg
ctggttgccatgtcctgggtgtctttctggatcagccaatcagccgtacctgcaagagta
tcactaggaatcactactgtgctgaccatgacaacgctgatggtgagtgcccgctcctcg
ttgcctcgtgcctccgccataaaagccctggatgtatatttctggatctgctatgtgttt
gtgttcgctgccctgattgagtatgcctttgctcactacaacgctgactacagcaagcaa
gagaaagccaaggtcaaagtgaaaaagactgcagagtccatggtgaagaatggaaagcag
gccatggtcctcttttcactgtcagtgacaggcatgaatcaaggctttgtggtctccaac
cggcagaaccgcgcccaatctgagacacctgtagagcctccggaagaggtggaaatggct
aagcaagaaagcagtgaggagaggaagtgctgcaagtgcaaacccatagacgcagataca
attgatatctacgcccgtgccgtcttccctttcactttcgccgtggtcaacgtcatctac
tgggtggcttataccatgtga
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