Ictalurus punctatus (channel catfish): 108265111
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Entry
108265111 CDS
T04658
Symbol
atoh1a
Name
(RefSeq) protein atonal homolog 1a
KO
K09083
atonal protein 1/7
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108265111 (atoh1a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Tal/Twist/Atonal/Hen, Atonal
108265111 (atoh1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
108265111
NCBI-ProteinID:
XP_017322718
Ensembl:
ENSIPUG00000000238
UniProt:
A0A2D0QWC3
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All DBs
Position
5:20224461..20226191
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AA seq
268 aa
AA seq
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MDVMGSSCEDARTAVESDAARGERFPLTLALMEGGDARAWLAPAHAEYLPHSSGSSSAEG
VSGSHLNKGARVGGTVRVRELCRLKGAARADEGRQRAPTSKAANVVQKQRRIAANARERR
RMHGLNHAFDELRSVIPSLDNEKKLSKYETLQMAQIYINALSDLLRAPGAEDDAHNGDVL
PPAYGGERSANSFPVQLAGVPFQYEEDAFVSLGASKSASECSKDSPRSSRSDGEFSPHSH
FSDSDETHAELHSEDELSELKLSRHRAF
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcatgggcagctcttgcgaagacgcgaggacggcggtggagtcggacgcggcg
cgtggggagcgctttccgctcactttggcgctgatggaaggcggcgacgcacgcgcctgg
ctcgctcctgcacacgcggaatacctgccgcacagctcgggctcctcgagcgcagagggc
gtgtccggttcgcacttaaacaagggcgcaagggtggggggcaccgtacgtgtgcgcgag
ctgtgccgcctcaagggagcggcgcgggcggatgagggcaggcagcgcgctccgaccagc
aaagccgccaacgtggtgcagaagcagagacgcatagcggcgaacgcacgagagcgccgg
cgcatgcacggtctgaaccacgccttcgacgagctacgcagcgtcatcccctccctagac
aacgagaagaagctgtcgaagtacgagacactccagatggcacagatctacatcaacgcg
ctgtctgacctgctgcgtgctcccggcgcagaagatgacgcgcataatggtgatgtgctt
ccgcccgcctacggaggcgagagatcagcaaactcatttcctgttcagcttgccggcgtg
ccgttccagtatgaggaagacgcgtttgtgtcgcttggagcgagcaagtctgcctctgag
tgcagcaaagactccccgcggtcgagtcggagcgatggagagttctcgccacactcgcac
ttcagcgactcggacgagacacacgcggaactgcacagcgaagacgagctgagtgaactg
aagctgagccgccaccgcgccttttag
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integrated database retrieval system