Ictalurus punctatus (channel catfish): 108265116
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Entry
108265116 CDS
T04658
Symbol
rad21l1
Name
(RefSeq) double-strand-break repair protein rad21-like protein 1 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108265116 (rad21l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108265116 (rad21l1)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108265116 (rad21l1)
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
108265116
NCBI-ProteinID:
XP_017322724
Ensembl:
ENSIPUG00000008683
UniProt:
A0A2D0QYA1
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Position
5:complement(5148303..5158591)
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AA seq
547 aa
AA seq
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MVFFTQLFTSKRGPLARIWLAAHWEKKITKAHVFECNLEATVEDIISPRIKIGLRTSGHL
LLGVVRIYSKKAKYLLADCNDAVVKIKVAFRPGQLDLPEEGMEAMVKAITLPEDFNDFES
QLPDLNTIDVVDHFSLNQSRTEEITMKENFGNSFLTMDDLGDETQSHQGLFDTSFQSVGA
NGDGFGDEGMAFDLVGNFIANANENAFLTDSYGESLTEVPATPPPTAINPTEPSTATSEA
LPDTPTLNETTLLENTEEGFALEPVAVTFSSERRKGSRKRKLVIDQSKELSNETIKAQLA
HYSDLLTPLDLAPPTRQLMDWKENGGVDYLFSHFCTPVMENDLQKLFPRDVLPGEKGPNR
KAGDDSDPKETREQAREAESESTAVHMVEEMSLLQETVEQSRAAEESSFIEPSFTHAEPP
ESKESRLEVSHPEPLSEESMLVHPSETDSETPLMHTQTQHSFLDSQNSEEKRMTSRAQNL
LQAIRKQNSSPDATFSLHEMCENRSRSNTAATFFCLLVLKKQQAIGLQQSAPYSDIIIIP
GPRFQTL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcttcacacaactcttcacctctaaacgtggacccctggccaggatctggctt
gcagcccattgggaaaagaagataaccaaagcccatgtgtttgaatgtaacctggaggcg
acggtagaggatattatttctccacggataaagattgggctgcggacttcaggtcacctg
ctcttgggtgttgtgcggatctactctaagaaagccaagtatctcctcgcagactgtaat
gatgctgtggttaaaatcaaagtggctttccgaccaggacagttggatctgcctgaggaa
gggatggaggccatggttaaagccattacactgcctgaggatttcaatgactttgagtca
cagctgcctgatctcaacactatcgatgtggtagatcacttctcactgaaccagagccgc
acagaggaaatcactatgaaggaaaactttggaaacagttttctcaccatggatgacttg
ggagatgaaacccaatctcatcagggactgtttgacacaagtttccaaagtgttggtgca
aatggtgatgggtttggtgatgagggcatggcttttgatcttgttggtaatttcatagca
aatgctaatgagaatgcatttctgactgattcgtatggtgaatcattaactgaggtccct
gcaacacccccaccaactgctattaatcctacagaaccttccacagctacttcagaggcc
ttgccagatactcccacactgaatgagaccacactgctggagaatacagaggaaggcttt
gctcttgaacctgtggctgttacattctcttcagagaggaggaaagggagcaggaaaagg
aagctggtgatagatcagtctaaggagctttctaatgaaaccatcaaagcccagctagca
cactattctgacctgctgaccccacttgacctagctccacccacacggcagctcatggac
tggaaggaaaatgggggcgtggattatctcttttcacatttctgcactcctgtcatggag
aatgatttgcagaagctcttccctagagatgtgttacctggggaaaaggggccaaacaga
aaagctggagatgatagtgaccccaaggagacgagggagcaggcgagagaggctgagagt
gagagcactgctgtgcatatggtggaggagatgagcttactgcaagagactgtggaacaa
agcagagcagcagaggaatccagctttattgaaccatctttcacacatgcagagcctcca
gaatccaaagaaagcaggctggaggtgtcgcatccagagccactttctgaggagtctatg
ctggttcatccatctgaaacagacagtgaaacaccactgatgcacacacagacacagcac
tctttcttggacagccagaacagtgaggagaagagaatgactagtcgagcacagaatctc
ctccaggccatcagaaagcagaacagcagccctgatgccacattcagccttcatgaaatg
tgtgagaatcgcagtcgatccaacacagcggccacattcttctgtctgctggtgctgaag
aaacagcaggccataggcttgcagcagagtgccccctacagtgacatcatcatcatacct
ggtccccgttttcagacgctttag
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