Ictalurus punctatus (channel catfish): 108265192
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Entry
108265192 CDS
T04658
Name
(RefSeq) uncharacterized protein LOC108265192
KO
K05152
tumor necrosis factor receptor superfamily member 14
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03266
Virion - Herpesvirus
ipu04060
Cytokine-cytokine receptor interaction
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
108265192
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108265192
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108265192
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ipu04050
]
108265192
04090 CD molecules [BR:
ipu04090
]
108265192
Cytokine receptors [BR:
ipu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108265192
CD molecules [BR:
ipu04090
]
Proteins
108265192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Gram_pos_anchor
DUF3487
Motif
Other DBs
NCBI-GeneID:
108265192
NCBI-ProteinID:
XP_047011743
UniProt:
A0A979EVB5
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Position
5:27766958..27797130
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AA seq
624 aa
AA seq
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MVFSLKNTYIIAATFLLNTELCFCACARAEYEINGECCPMCAPGSRVYRHCTEFVSTTCV
PCIDSFTTEPNGLLNCFSCAVCDTGQGIRVKTACTRTSDTICEPLEGFYCTHDDMGSCTQ
AVEHTKCSPGQFIKQKGTAHKDAECAGCKNGTYSDGSLEICKQHTKCEDLGLTQIKPGTT
TSDVECGNKIQGALIAGIIVCIVVVVAVTLVILLKIGHKIGRCAARNSEPETGQTELKTP
TSETSFLQKNSTVMELAIIPSAVQWLKNAQSFWIIFYLKIDHALKSLENKCLPVYVQRLP
LLESEQHFRVSLFRENTRSRLGSAALRFISTFTMISILQHTFIIAAIFFLNIELCFCACA
RAEYEINGECCPMCSPGNRVYRHCTEFTSTTCMQCVVSTFTDEPNGLARCISCTVCDAAQ
GIGVKTACTPTSDTVCEPLEGFYCTDEYSGNCRYAVEHTKCHPGQYIKQKGTAVKDAECA
ACADGTYSNGSLQICKEHTKCEDLGLKEITPGTNSLDVECGRKPPVALIAGILAVGAIVL
VVAGGLIFKRRHKKGPPKSHTAEKMRFSDKQTCESDTSATLMREERICAFNHSGHVASPV
ENDCGKQCCDLQEHEITHTGYGIT
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggtattcagcttgaaaaatacgtatattattgctgctactttcctcctgaacactgaa
ctgtgtttttgcgcttgtgcccgagctgaatatgagataaatggagaatgttgtcccatg
tgtgcacctggaagccgtgtttataggcattgcactgaatttgtcagcacgacttgtgta
ccgtgtatcgactctttcaccaccgagcccaatggtcttctaaattgctttagctgtgct
gtgtgtgatactgggcagggcatacgagtaaagacagcctgcacacggacttcagataca
atctgtgagcccctggagggcttttactgtacacatgatgacatgggcagctgtacacaa
gctgtggaacatacaaaatgcagccctggacaattcataaagcagaaaggaacagcacat
aaagatgccgaatgtgctggatgtaaaaatggtacctactctgatgggtcacttgaaatt
tgcaaacaacatacaaagtgtgaagatttgggacttacacaaataaaaccaggaacaaca
acgtctgatgttgaatgtggaaataaaattcaaggggccctaatagctggaatcatagtt
tgcattgttgttgttgtggctgtaacactagtcatacttctcaaaattggacacaagatt
ggccgatgtgcagcaaggaattctgagccagaaacaggacagacagaacttaaaacaccc
acctcagagacatcatttctacaaaaaaacagtactgtaatggaattagcaatcattccc
tcagcagtacaatggttaaaaaatgcacaatccttttggattatcttctatctcaaaata
gaccacgccctgaaatccctagaaaacaagtgcctgcctgtttatgtacagcgtcttcct
ctgctagaatcagagcagcacttccgggtctcgttgtttcgcgagaacacacgctcgcga
cttggaagcgctgccctacgtttcatcagcactttcacaatgatttccattttgcagcat
actttcattattgctgctattttcttcttgaatattgaactgtgtttttgcgcttgtgca
cgagctgaatatgagataaatggagaatgctgccccatgtgttcacctggaaaccgtgtt
tatagacattgcactgaattcaccagcacaacctgtatgcagtgtgttgtctcgacattc
actgatgaacccaatggccttgcaagatgcattagttgtacagtgtgtgatgctgcacag
ggaataggagtaaaaacggcctgcacaccaacttcagatacagtttgtgagccactggag
gggttttactgtactgatgaatacagcggcaactgcagatatgctgtggagcacacaaaa
tgccaccctggacaatacataaagcagaaaggaacagcagttaaagatgctgaatgtgca
gcgtgtgcagatggcacctactccaatgggtcccttcaaatttgtaaagaacatacaaaa
tgtgaagatttgggactaaaagaaataacaccaggaacaaattctcttgatgttgaatgt
ggaagaaaacctccggtggctctaatagctggaatcctagcagtgggggctatagttttg
gttgtagctggaggactaatttttaaaagaagacataaaaaaggcccacctaaatctcat
actgctgagaaaatgagattttcagacaaacagacatgtgaaagcgatacttcagcaaca
ttaatgagagaagagagaatatgtgcctttaatcactctgggcatgtggcttctccagtt
gaaaatgactgcggaaaacaatgttgtgacctacaggagcatgagataacacacactgga
tatggtataacgtga
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