Ictalurus punctatus (channel catfish): 108265205
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Entry
108265205 CDS
T04658
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108265205
04020 Calcium signaling pathway
108265205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108265205
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108265205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
108265205
NCBI-ProteinID:
XP_053535324
UniProt:
A0A9F7TJK1
LinkDB
All DBs
Position
Unknown
AA seq
2285 aa
AA seq
DB search
MLEVSDMLAVPVLCQDTESWHKHRGALLDPLLFHTGSCDALCPTQEGGPGAMEGQPGVST
TIFTRRRGGLIEQKDIVKAHQAHKIQSTPQARRKEWEMARFGDAVPPGHGVLDGGSERSR
TREPPSSSTGGVSPVFKQTKAQRARTMALYNPIPVRQNCFTQNRSLFIFSEDNVVRKYAK
RIIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMSKRLEKTEPYFIGMFCFEAGIKI
VALGFVFHKGSYLRNGWNVMDFIVVLSGILATAEAHMNIPVDLRTLRAVRVLRPLKLVSG
IPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGRLHKTCIPDPDIQENETV
PDWEAEFPCGDRRCPYKYSCSGLWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNA
NDALGPTWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIER
ELNGYRAWIDRAEEVMLAEENKNSGPSALDVLKRATTIKRRGVDSIHHGPEEQCVDIASV
GGPLNRASIRSVKRGPAAYFRRKERMLRISVRRMVKTHTFYWTVLGLVALNTICVAIVHH
NQPEWLSTFLYYAEFLFLGLFLTEMFLKMYGLGPRLYFHSSFNCFDFGVIVGSIFEVIWS
FFRPGMSFGISVLRALRLLRIFKITKYWASLRNLVVSLMNSMKSIISLLFLLFLFIVVFA
LLGMQLFGGRFIFEEFTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWS
SIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEAEEEAFNQKHALQKAKEVGPMS
SFISSEGMRRRRPYLYRKRVLIHRGRTAFSLEESDSFGDAPPLNTSRSFMSRRERRRRLT
MSVWEQRTSQLRRHRQTSSREILYGSSVCHHRTLARSAEIPPSPEISSALDPLESLEPSM
EEQNVSVVPLPDPPESEDSSAKDLYGNPAHAHTQISTTLERPDPLDAVKDEQDVDDTQLP
GNAPEEFQDKNHLSVRRANGERRQRGTRKYSKYGKHSKHRNPETHRRPRDEPNADERSRS
ASRERTTGNDGDEAEEEKSNDGGGSPEERTAEDRVLAADPEPATLQITDSSTLECAGPGE
ASTEGENNNNQDKTALSTNVVTEDLDTTPGLELSTITTNNKDLEASKSEKEDEQAANRSR
TPPDSMFIFKPHNPIRRACHYVVNLRYFEMCILLVIAASSIALAAEDPVATNSDWNKVLR
YFDYVFTGVFTFEMIIKMIEQGLILHDGSYFRDLWNILDFIVVVGALVAFALTNVLGNNK
GRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIA
VQLFKGKFFYCTDGSKDTEKDCQGYYIDYNRDRKEVKKREWKRHEFHYDNVIWALLTLFT
VSTGEGWPQVLQHSVDVTDEDQGPSRGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQ
EQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRHTFQYRLWHFVVSPSFEYTVLTM
ITLNTIVLMMKYYSAPPVYDAVLKHLNTAFTVLFSVECVLKILAFGFMNYFRDTWNIFDF
ITVLGSITEIVVDQQSASFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVC
LLIAMLFFIYAIIGMQVFGNIKLNEETHINQHNNFKTFFGALMLLFRSATGESWQEIMLS
CLGGQGCEADPSLIPPSEPDGGCGTDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTR
DSSILGPHHLDEFVRMWGQYDRAACGRIHYKEMYKVVRTISPPLGFGKNCPYRVACKRLV
LMNMPVDAEMTVHFTSTLMSLIRTALEIKIARGGEDRGQMDIELQKEISIIWPHLSQKTL
DLLVPIHKASDMTIGKIYAAMMIMDYYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPQEI
LCSAKALPFLTHSAGNALTRGGFVALSPISPQELFMQPIAPEQEEEEYTPHYRPQHSPST
VNSENTLMRRSFSTIGDQCVNGVWQEEFSLERVSPDRLERPRQRSFRGVRSNLREPVCKE
RGRSKERKHLLSPDPSRCNSEERNQPRTQDTQHTHTRSPSEGRTHTQGDASESPLPSSSD
SRGRRQLPQTPSRPRPYISYSPLVCRSHLTTEDSQSRTQSAIEGVGSVLSPASPQRYTSE
PYLPLHDDSNSPEEMLTFEAAIATSRGRGHVVSSAPQLRHTWQMPNGHFRKGCELLSDTD
EDDRC
NT seq
6858 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagtcagcgacatgctcgcagtgccagtgttgtgccaggacacagagagttgg
cacaaacacagaggggcactgcttgaccctctcttatttcacacgggcagttgtgatgcc
ctctgccccacacaggaaggggggccgggagcgatggaggggcagccaggggtcagcacc
accatcttcacccgaaggagaggaggacttatcgagcaaaaggacattgttaaagctcat
caggcccacaagatacagagcacaccacaggcacgacgcaaagaatgggaaatggctcgg
ttcggggacgcggtgccgccggggcacggtgtgctggacggcgggtcggagcgcagccgg
actcgcgagcctccttcatcctccaccgggggagtttctccggtgttcaagcagaccaaa
gcgcagcgcgcgcgcaccatggccctgtacaaccccatcccggtccgacagaactgcttc
acccagaaccggtccctcttcatcttcagcgaggacaacgtggtgcggaagtacgccaag
aggatcatagagtggccgccgtttgagtacatgatcttagccaccatcatcgcaaactgc
atcgtcttggctctggagcagcatttacctggagaggacaagacacctatgtcaaagaga
ctggagaaaaccgagccgtacttcatcgggatgttctgtttcgaggcggggataaagatc
gtcgcgctggggttcgtgttccataaagggtcgtacctgaggaacggctggaacgtcatg
gacttcatcgtggtgctcagcgggatcctggccactgccgaagctcatatgaatatcccg
gttgatctgaggacgttgcgagctgttcgagttctgcggcccctcaaactggtgtcagga
attccaagtctgcagatcgttttgaagtccatcatgaaggcgatggttcctctgctgcag
atcggcttgttgttattttttgccattttaatgttcgcaatcatcggcctggagttctac
agcggccgcctacacaagacctgcatccccgatccagatatacaggagaacgagacggtt
ccggattgggaggcggagttcccgtgtggagatcgtcggtgtccgtataaatacagctgt
agcgggttgtggatcgggccgaacgacggaatcacacagttcgacaacatcctgttcgcc
gtgctcaccgtcttccagtgtatcaccatggagggctggaccaccgtcctgtacaacgcc
aatgatgcattaggtcccacatggaactggctgtacttcatccccctcatcatcatcggc
tccttcttcgtgctcaacctggtgctgggagttctgtctggagagtttgctaaggagaga
gagcgtgtggagaacaggagagcttttatgaagctcagacgtcagcagcagatcgaaaga
gaactgaatggatatcgagcttggattgatcgagcagaggaagtgatgctggcggaggag
aataagaactcgggtccttcagctctggacgtgttaaagagagccaccacgataaagagg
aggggcgtggactccatccatcacggtcctgaggagcagtgtgtggacatcgcttctgtc
ggtgggccgctgaaccgggcgagtatccgcagcgttaagcgagggccggccgcgtatttc
cggaggaaagagaggatgttgcgtatctccgtccgccgcatggtgaagacacacaccttc
tactggaccgtgctgggactcgtggccttaaacaccatctgtgtggccatcgttcatcac
aaccaacccgagtggctctccaccttcctctattacgcagagttcctgttcctgggtttg
tttctgacggagatgttcctgaagatgtacggtctcggccctcggctctacttccactcc
tcctttaactgcttcgacttcggagtgatcgtcggcagtatctttgaggtgatctggagt
ttcttcagacccggaatgagtttcgggatcagcgtcctgcgcgcgctccgactgctgagg
atcttcaaaattaccaagtactgggcgtctctgaggaacctggtcgtgtctttgatgaac
tccatgaagtccatcatcagtttgctcttcctcctcttcctcttcatcgtggtctttgcg
ctgctgggcatgcagctgttcgggggaaggttcatctttgaagaattcacccccactaac
tttgatacgtttccggctgccatcatgaccgtgtttcagatccttacaggtgaggactgg
aacgaagtcatgtacaacgggattcgctctcagggcggagttaagtcgggaatgtggtct
tccatttacttcatcgtcctcacgctgtttggaaactacacacttctcaacgtcttcttg
gctatcgccgtggacaatttagccaacgctcaggagctcaccaaggatgaagaggcggaa
gaggaagcgtttaaccagaaacacgctctgcagaaagcgaaagaggtcggcccgatgtcg
tccttcatctcctcagagggaatgcggaggagacggccgtatctgtacaggaagcgcgtg
ctgatccaccgcggccgcacggctttctctctggaggagtcggacagtttcggcgacgct
cctccactcaatacctctcgctctttcatgtccaggagagaaagacgccggcgtctgacc
atgtccgtgtgggagcagaggaccagccagctccggcgccatcgccagacctccagccga
gaaatcctctacggttcgtctgtgtgccaccatcggacactggcgcgctcggccgagatc
cctccctcgccggagatcagttccgctctcgaccctctggagtctctcgagccgtccatg
gaggagcagaacgtctccgtggttccgctgccggatcctcctgaatccgaagactcgagc
gccaaagatctgtacggaaaccccgcgcacgctcacacacagatcagcaccactctggag
cgtccggatcctctggacgcggtgaaagacgagcaggacgtcgatgacacccagttaccc
ggaaacgcccccgaggaatttcaggataaaaaccacctgagcgtccggagagccaacgga
gagcggcggcagcgagggacgcgtaaatacagcaaatacggtaaacacagcaaacacaga
aacccagagacgcaccgtcggccgcgcgacgagccgaacgcagacgagcgcagccgctcc
gccagccgagaacggacgacgggaaacgacggcgacgaagcggaggaggagaagagcaat
gacggaggtggcagtccagaggaaaggaccgctgaggacagagttctggccgcggacccg
gagccggccacgctccagatcaccgacagcagcacgctggagtgtgcaggacccggcgag
gccagcactgagggagaaaacaacaacaaccaggacaaaacggctctcagcaccaacgtg
gtgactgaagacctggacaccacaccgggactggagctctccaccattacaacaaacaat
aaagatctggaggcttcgaaatctgagaaggaagacgagcaagcagcaaatcgctcgaga
actcccccagacagcatgttcatcttcaaaccccacaatccgatccgcagggcgtgtcat
tatgtggttaatcttcgttattttgaaatgtgtatcctgttggtcatcgctgcgagcagt
atcgctctggcggctgaagatccagtggccacaaactcagactggaataaagtgctgcgg
tactttgattatgtgttcactggagttttcacatttgaaatgatcattaagatgatcgag
cagggcctgatccttcatgatggctcttatttccgtgatctgtggaacattctggatttc
attgtggtggttggagcactggtagcattcgctctcacgaatgtactggggaataataaa
ggtagagacattaaaaccatcaagtctctgcgagtgctgcgagttctccggcctctgaag
accatcaagcgacttcctaaactaaaggcggtgtttgattgcgtggtcacgtctctgaag
aacgtctttaacatcctcatcgtgtataaactcttcatgttcatcttcgccgtcatcgca
gtgcagctcttcaagggaaaattcttctactgcactgacggctccaaggacacggagaaa
gactgtcagggttactacatcgactacaacagagataggaaggaggtgaagaagcgcgag
tggaagagacacgagtttcactacgataacgtgatctgggccttactcacactcttcacc
gtctccacaggagaaggctggcctcaagttctccagcactcggtggatgtgacggatgag
gatcagggtccgagtcgagggaaccggatggagatgtccatcttctacgtcatttatttt
gtggttttcccgtttttcttcgtcaacatcttcgtcgctctgatcatcatcaccttccag
gagcaaggagacaagatgatggaggagtgcagcctggagaagaacgagagggcgtgtatc
gactttgcgatcagtgctaagccgctaacgcgctacatgccgcagaaccgccacacgttc
cagtatcgactgtggcactttgtggtgtcgccttcgtttgagtacacggtgctgaccatg
atcacactcaacaccatcgtcctcatgatgaagtattattcggctcctcctgtatacgac
gccgtgctgaaacacctcaacactgcgttcactgtgctcttctctgtcgagtgtgttctc
aagattttggcgtttggttttatgaattatttcagagacacgtggaatatattcgatttc
atcactgtcctgggaagcatcacggagatcgtagtcgaccagcagtcggcttcctttaac
atgagcttcctgaagctgttccgagcagctcggctaataaagctgctcaggcagggatac
accatccgcatcctcctctggaccttcgtccagtccttcaaggctctgccgtacgtgtgt
ttactcatcgccatgctcttcttcatctacgccattatcggcatgcaggttttcgggaac
atcaagctgaacgaggaaactcacatcaaccaacacaacaacttcaaaaccttctttggt
gccttgatgttactcttcaggagtgcgacaggcgagtcgtggcaggaaatcatgttgtcg
tgtttaggaggtcaggggtgtgaggccgacccgtctctcatccctccatccgaacctgac
ggaggatgtggcactgacttcgcttacttctacttcgtctccttcatcttcttcagctcc
ttcctgatgttgaatctgtttgtggcagtgattatggataattttgagtacttgacccgc
gactcctcgattctcggtcctcatcacctggacgagtttgtgaggatgtggggacagtat
gaccgagcggcctgtggcaggattcattataaggagatgtacaaagtagtgcgcactata
tcgccccctctgggctttgggaagaattgcccctacagggtggcatgcaagaggctggtg
ctgatgaacatgccagtggacgcagagatgacggttcacttcacgtccactctgatgtct
ctgatccgcaccgcactggagatcaagatcgcacgaggtggagaagaccgagggcagatg
gacattgagcttcagaaggagatcagcatcatttggccgcatctctcccagaaaactctg
gacctgctcgtgccaattcataaagcgagcgacatgacgatcgggaaaatctacgccgcc
atgatgatcatggactattacaaacagagcaaagccaaaaaactcagacagcagctggag
gaacaaaaacacgccccgatgttccagcgcatggacgcctcgtcgttaccgcaggaaatt
ctgtgcagtgctaaagctctgccgttcctcacacacagcgcaggaaacgctctgacaaga
ggtggtttcgtggcgctgagtcccatttctcctcaggaactcttcatgcagccaatcgca
ccagagcaagaggaggaagagtacacaccccactacagaccccagcactcccccagcacg
gtaaactcggagaacacgctgatgaggcgctcgttctccaccatcggagatcagtgtgtg
aacggagtctggcaggaggagttctcgctggagagagtgagtcctgaccgactggagaga
ccgcggcagcgcagcttcagaggtgtcaggtcgaatctcagagagccagtgtgtaaggag
agaggacgctcaaaggagaggaaacacctgctgtcacctgatccatcacgctgcaactct
gaggagagaaaccaaccaagaacacaagacacacagcacacacacacacgctcacccagc
gaggggagaacacacacacagggcgacgcttcagagagtccactcccctcctcctcagac
tccagggggcgtcgccagcttcctcagacaccctccagaccccgcccgtacatctcctat
tcgcctctagtgtgccgcagccacctgaccaccgaggacagccaatcaaggacgcagtct
gccatagagggggtgggctctgtgttaagccccgcctccccgcagcgctacacctcagag
ccatatctgccgctgcatgacgactccaacagtccagaggagatgcttacttttgaggct
gccatagcaaccagtcgagggcgtggccatgtcgtaagctctgcccctcagttgcgtcac
acatggcagatgcctaacgggcatttccgaaaaggctgcgagctcctcagtgacacggac
gaggacgaccgctgctag
DBGET
integrated database retrieval system
