Ictalurus punctatus (channel catfish): 108265223
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Entry
108265223 CDS
T04658
Symbol
csgalnact1b
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ipu01100
Metabolic pathways
Module
ipu_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108265223 (csgalnact1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108265223 (csgalnact1b)
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
108265223 (csgalnact1b)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
108265223 (csgalnact1b)
Glycosyltransferases [BR:
ipu01003
]
Glycan extension
O-Glycan
108265223 (csgalnact1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_tranf_2_2
Glyco_transf_7C
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
108265223
NCBI-ProteinID:
XP_017322835
UniProt:
A0A2D0QZ97
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Position
5:complement(18797051..18802026)
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AA seq
503 aa
AA seq
DB search
MLKRWLVAMMARTKLLIMVAFCFTLFLYNPDCRTRGNQHQQILLKKTMDDMKYQALLQER
EEQHHHYTASLRKQIFHLKYALREKRLLQKEETHNSHSELEVFLHKQLHRMKSQVGVTIP
NEFAAVPYESFTLHNVYQLDTGLTKHLRKTLRRDMAGALEAALHILNGPKDKDDPRFRKT
YSPHDFFEGIFHSERDKGSLYDLTFRDNTSLDFRRLELFRPFAPLQNVKEEIIDTSRMLI
NIIVPLATRVDTFQQFMNNFREICVKDERIHLTVVNFGTEKINQVRRIIETAARRVRSRN
FTLIHLDEKFTRGRALNIGARAWKKSNVLLFFCDVDVHFTVDFLNSCRINSQPGKRVFYP
IPFKKYNPDVIYGDHTPTLEKQQVINKSTGFWRELGFGITCQYLSDFINIGGFDVTNKYT
GEEDLHLYRKYLHSNLMVVRAPSRELFHMWHKTPCAENLPTESFNECIQTRAMNEASHSQ
MGKLFFHQQIDNHLHKYNQTETQ
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagatggcttgtggccatgatggcccgtacaaaacttctgattatggttgca
ttctgctttacactattcctgtataacccagactgcagaactcgtggaaatcaacaccaa
caaattttgctcaaaaagaccatggatgatatgaaatatcaagctttgctgcaagaacgt
gaggagcaacatcatcactatactgcaagcctaagaaagcagattttccatttgaaatat
gctctcagagagaaacgacttctacagaaggaggaaacacacaatagtcattcagaactt
gaggtgttccttcacaagcaactacatcgtatgaaaagtcaggttggcgtgactatacca
aatgagtttgctgcagtgccatatgagagctttacacttcacaatgtctatcagcttgac
accgggctcacaaagcatctgcgaaaaactcttcgaagggatatggctggggcattagaa
gcagctctgcatatccttaatggtcctaaggataaggatgaccctcgatttcgtaagaca
tactcaccgcatgacttctttgagggaatttttcattctgaaagagataaaggatctcta
tatgatctcacattcagagacaatacttctctggacttcaggaggctggagctctttcgg
ccatttgcacctctgcaaaatgtgaaggaagaaataatcgacacatccaggatgctaata
aatataattgtgccattggccacgagggttgacacatttcaacaattcatgaacaatttt
agggaaatttgtgttaaggatgaaaggatccatcttactgtagtgaattttggaacagag
aagataaatcaagtaagaagaattatagaaactgctgcaaggagagtgagatcaaggaat
ttcactttaatccacctcgatgagaagtttaccagaggacgagctttgaacataggagct
cgagcttggaagaaaagcaatgtcctcctatttttctgtgatgtcgatgtccactttact
gttgatttcctaaactcgtgccgcattaactcccaacctggtaaaagagtcttctacccc
ataccttttaagaagtacaacccagatgtaatttatggtgaccatacacccactcttgaa
aaacagcaggtaataaataaaagcactggattctggagagagttaggctttggaataaca
tgccagtatttgtcagatttcatcaacataggaggttttgatgtaactaacaaatatacg
ggagaagaagatttgcacctgtacagaaaatacctgcacagcaatctcatggtagtgcgt
gcaccttcacgagaactcttccatatgtggcataagacaccttgtgcagaaaacctacca
acagaatcatttaatgagtgcatacagactagagccatgaatgaggcctctcacagtcag
atgggaaaactgttctttcaccaacaaatagataatcatctacacaaatacaatcaaaca
gaaactcagtga
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