Ictalurus punctatus (channel catfish): 108265235
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Entry
108265235 CDS
T04658
Name
(RefSeq) vesicular inhibitory amino acid transporter
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108265235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108265235
Transporters [BR:
ipu02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
108265235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
108265235
NCBI-ProteinID:
XP_017322856
Ensembl:
ENSIPUG00000024855
UniProt:
A0A2D0QYM6
LinkDB
All DBs
Position
5:complement(11712757..11716814)
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AA seq
518 aa
AA seq
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MAHLIRHKISSKIISIVNSASHKSERKVSGVFARLGFQAATDEEAIAFAERDGLDYEYRH
GMRMEEVRTSGEREGMVAGDSHYQRHGTAPPGSRKTSESSDAQGAQDKITAWDAGWNVTN
AIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIVCLYEENEDGELVRVRDTYV
DIANACCAPRFPVLGGHVVNAAQIIELVMTCILYVVISGNLMYNSFPGLPVSQNAWSVFA
AAVLMPCAFLSNLKSVSKLSLLCTIVHFIINVMVIAFCLSHAQDWAWDKVKFYIDVKKFP
ISIGIVVFSYTSQIFLPSLEGNMQKPAEFHCMLEWTHIAACILKGLFALVAYLTWADDTK
EVITDNLPPGIRMWVNIFLVAKALFSYPLPFFAAVDILEKSFFQGGDGTPFPNCYGTDGR
LKSWGFAMRIGLVVFTLLMAIFVPHFALLMGLTGSLTGAGLCFLLPCLFHLKLLWRKLLW
HEVFFDISICIIGSICSISGFIYSIEGLIEAFKYNIPD
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcccatttaatacggcacaagatttcaagtaaaatcatcagtatagtgaacagcgcg
tcacataaatccgagaggaaggtgagcggtgtgtttgcgcggctcggcttccaggcggcc
acggatgaggaagcgatagcgttcgccgagcgtgatggtctggattacgagtacagacat
gggatgagaatggaagaagtaaggacgagcggggaaagagagggaatggtggcaggagac
agtcattaccaaagacacggtacggcccccccaggatccagaaaaaccagcgaatccagc
gatgcgcaaggagcgcaagacaaaatcacagcatgggatgcgggctggaacgtcaccaat
gcaattcagggcatgtttgttttgggcctcccttatgccatcctgcacggtggctacctg
ggcctcttcctcatcatcttcgccgctgtggtgtgctgctacacaggcaagatcctcatt
gtgtgcctctatgaggagaacgaggacggagagcttgtacgtgtgcgagacacatatgtg
gacatcgcgaacgcttgctgcgcgccacgcttccctgtgctcggtggccatgttgtgaat
gcggcacaaatcattgagctggtgatgacatgcatcctttatgtggtcattagtggcaac
ctgatgtataacagctttccaggcttacccgtgtcacagaatgcatggtcagtgtttgct
gcagcggtgctcatgccgtgcgctttcctgagcaacctgaaatctgtctcaaagctaagc
ttgctgtgtacaattgtgcacttcatcattaatgtgatggtgattgcattctgcctgtca
catgcgcaggactgggcatgggacaaggtcaagttctacattgatgtcaagaagttcccc
atctctattggcattgttgtttttagctacacatcacagatttttcttccctcacttgag
ggcaacatgcagaagcctgctgagttccactgcatgttggagtggacacacatcgctgca
tgcatcctcaagggcctgtttgcccttgtagcctacctcacatgggctgacgacacaaaa
gaggtgatcacagataacctcccgcctggcatacggatgtgggtgaatatctttctggtg
gccaaggcattgttctcctatcccttgcccttctttgctgctgtagacatcttagagaaa
tccttctttcaaggtggagatggaaccccattcccaaactgctatggcacagatgggagg
cttaagtcctggggttttgccatgagaattgggcttgttgttttcacccttctcatggct
atctttgtcccgcactttgctcttctcatgggccttactgggagtctaactggtgctgga
ctgtgcttcctgttgccctgcttattccacctgaagcttctttggcgcaaacttctatgg
cacgaggttttttttgacatctctatttgtataataggaagcatatgtagcatctcaggg
tttatttactccattgaagggctcattgaggcctttaagtacaacatcccagattaa
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