KEGG   Ictalurus punctatus (channel catfish): 108265244
Entry
108265244         CDS       T04658                                 
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108265244
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108265244
Enzymes [BR:ipu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     108265244
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     108265244
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     108265244
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_B_thumb DNA_pol_lambd_f HHH_5 NTP_transf_2 HHH_2 Cdd1
Other DBs
NCBI-GeneID: 108265244
NCBI-ProteinID: XP_017322876
Ensembl: ENSIPUG00000024873
UniProt: W5UI78
LinkDB
Position
5:complement(14469496..14483481)
AA seq 336 aa
MSKRKAPQETLNEGITDFLIELANYEKNVNRATHKYNAYRKAASVIAKYPNKIKSGNEAK
KLDGVGAKIAEKIDEYLTTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFYDEGVK
TLDDLKKIEHKLNHHQQIGLKYFEEFEKRIPRSEMEKMEALILQELGQLDPDYIGTICGS
YRRGAQSSGDIDILLTHPDFTSQSQKQPWLLHAVLEHLESIGFVTDTLSKGDTKFMGVCQ
LKRGVKDEKDYDHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PLGVTGVPGEPLLVDSEKDIFDYIHMKYREPKERSE
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgagcaaacggaaagcaccgcaagaaactttaaacgagggaatcacggactttcttatt
gaattggccaattatgaaaaaaatgtaaatcgggctacccataagtacaatgcatacaga
aaagctgcttctgtgattgctaagtacccaaataaaatcaagagtggcaatgaagccaag
aaactggatggggttggtgcaaagattgctgaaaaaattgatgagtatttaaccacaggg
aaactccgcaaactggaaaagattcgcaatgatgacaccagctcctctatcaacttttta
actagagtgactggaataggcccagctgcagctaggaagttctatgatgaaggtgtcaag
accctagatgatctaaagaagattgaacataagctgaaccatcatcagcagattggcctt
aaatattttgaagaatttgagaagagaattccccgctcagagatggagaaaatggaggct
ttaatattacaagagttggggcagctcgacccggattacattggcaccatctgtggcagc
tacagacgaggtgcacagtcgagtggtgatattgatatactgctgactcatccagacttt
acctcccaatctcaaaaacaaccctggctgctccatgcagtgttggagcaccttgagtct
attggctttgtcactgatactttgtccaaaggagatacaaagttcatgggtgtatgccag
ctgaaaagaggagtcaaggatgagaaggattatgatcatcgccgtattgatatcaggctt
attcctaaggatcagtattactgtggtgtgctctacttcactgggagtgatatattcaat
aagaatatgagaacccatgcgcttgagaaaggcttcacccttaatgagtacactattcgt
ccactaggagtaactggtgtgcctggagagcccttactggtggacagtgagaaggacatt
tttgactacatccacatgaaatacagagagccaaaagaacgcagtgaatga

DBGET integrated database retrieval system