Ictalurus punctatus (channel catfish): 108265315
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Entry
108265315 CDS
T04658
Symbol
si:ch73-61d6.3
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03272
Virion - Hepatitis viruses
ipu04514
Cell adhesion molecules
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108265315 (si:ch73-61d6.3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108265315 (si:ch73-61d6.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108265315 (si:ch73-61d6.3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108265315 (si:ch73-61d6.3)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108265315 (si:ch73-61d6.3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Spectrin_Anc-1
DASH_Dad2
Relaxase_C
Syntaxin
DASH_Dad1
Sec8_N
FapA
TMF_TATA_bd
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
108265315
NCBI-ProteinID:
XP_017322992
Ensembl:
ENSIPUG00000017742
UniProt:
W5UEH4
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All DBs
Position
5:34822483..34842629
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AA seq
515 aa
AA seq
DB search
MFEKQPYESPPMYSPPSHSFRPQGSFLPPQSEFDPYPPPPGSYYIGEEVPQHFYKWTSPP
GIIKIMEGAIVVLCLGIFACVASTLVWDMQYGYGYGGSYGLGSGSSLGGYGSGYYGSGYY
GGGNYGGYNYVSPYSAKSAMIAMAAINFIVSLAIFVATFSKTRTIRSRKFYLIVLVCSVV
LAVLQSIISIVYIVGVNPMAQSSASMLYNPMLMMCQSLYGNSVTGMGGGFPLYNQYLYHY
CFVDPQEAVAMVCGFLVVIALVVAAFFSYKTRSKIWRYGKHNVYWDEPLTGGAEGRDVED
WVNNVDDGQSLHEQSVMFSEKGALPLNKSQSVTSIPFKSDSYTPPAYSERVFSRAQDPES
SSPSERTERKPAALRGKRRRRNPELDESQYETEYTTGGETGNELDPSHWTSLYPEITSSS
QRQDYKREFDSDLRTYKQLCAEIDDINDELNKLSRELDTLNEGTNKYQAVAEEFNRLKDL
KRMPDYQEKKQRCRRLRHKLFHIKRMVKDYDRAQS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaaacagccgtacgaaagcccccccatgtacagccctccgtcacacagtttc
agaccccagggcagtttcctcccccctcagagcgagttcgacccgtacccccctcctcct
gggtcgtattatatcggagaggaagtgccacaacatttctacaaatggacctctcctccc
ggaatcatcaagatcatggaaggtgccattgtggtgttgtgtctcggtatcttcgcctgc
gtcgcgtcgacgctcgtctgggacatgcagtacggttacggatacggaggctcgtatggc
ctcggttctgggagcagtctcggcggctacggatccgggtactacggatccgggtactac
ggaggcgggaattatggaggctacaactacgtgagcccgtattctgccaaatccgccatg
atcgccatggctgccatcaacttcattgtgtcgctggccatcttcgtggctaccttctcc
aaaacgaggaccatccggagcaggaagttctacctaatcgtgctggtgtgctccgtcgtc
ctggccgtgctgcagagcatcatcagtatcgtgtacattgtaggggtgaaccccatggct
cagagctccgccagcatgctctacaaccccatgctgatgatgtgtcagagcctgtatggg
aacagtgtgacgggaatgggcggaggattccctctctacaaccagtacctctatcactac
tgcttcgtcgatcctcaggaggccgtggcgatggtgtgtggcttcttggtggtgattgcg
ctggtcgtagctgcgttcttctcctataaaacgagaagtaagatctggcgctacggaaaa
cacaacgtgtactgggacgagccactgacgggcggcgccgagggcagagacgtggaggac
tgggtgaacaatgtggatgatggacagagcctccacgagcagtcggtgatgttttcagag
aaaggagctctgccactgaacaagtcccagagtgtgacctccatcccctttaagagtgac
tcctatacacctccagcgtactcggagcgtgtgttcagtcgtgctcaggacccggagagc
tcgagtccgtctgagagaacagagaggaagcctgcagcactgcgcgggaaacgccgcagg
aggaaccctgagctggacgagtctcagtacgaaaccgagtacactacaggaggagagacc
gggaatgaactagaccccagtcactggaccagtctgtacccagagatcacgtccagctct
cagagacaggactataagagggagttcgattcggatctgcgcacgtacaaacagctgtgt
gctgaaatcgacgacatcaacgacgagctgaacaaactgagccgagaactcgacacgctg
aacgaggggacgaacaaataccaggccgtagcagaggaatttaatcgattgaaagacctg
aaacggatgccggattatcaggagaaaaagcagcgctgccgtcgcctgcgtcacaaactc
ttccacataaaacgcatggtgaaggattacgaccgagctcagtcctaa
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