Ictalurus punctatus (channel catfish): 108265332
Help
Entry
108265332 CDS
T04658
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108265332
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
108265332
Peptidases and inhibitors [BR:
ipu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
108265332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
ADAMTS_CR_3
TSP_1
ADAMTS_CR_2
Reprolysin
Adt-1
Reprolysin_3
Reprolysin_4
Reprolysin_5
TSP1_spondin
TSP1_CCN
Reprolysin_2
Peptidase_M10
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
108265332
NCBI-ProteinID:
XP_017323024
UniProt:
A0A2D0QXJ3
LinkDB
All DBs
Position
5:complement(5413713..5436615)
Genome browser
AA seq
1545 aa
AA seq
DB search
MAALMSLFLASVLVDTAFLTTQISLEKDFLQSLAPEDIFHYFGTNSTTLIPEFELVWVSC
FRDESGGKHCSFQAQGKDFKLRWRNEPSLSFPSNLELAINATLSVIKRRDNKCCKQLHVL
KPEDARSFLSVCDGKLQGLLLLQSGKLHVHPLFHKHSDHLRNTVVTPPGVPHLLLPHPSP
VRTYLQQSQSHRRLQRSFPGAEVTHLELLVVVGPDVHEVHKQDTEKYILTNLNIASELLR
DVTLGANIRVHLIRMIIFTEPEPDIQISDDITSSLRSVCEWGHKVNPSTETDPLHADLLL
YITRFDLVLPSGNKQVRGVTQLGGVCSSQWNCVITEDTGFDLGITIAHEIGHSFGINHDG
AGNTCSTGGFIMGTDGGYNSVDLTWSQCSRDQLLNFYSAGKAECVKDVPVLGGSLQEWKP
GLYYGVDDQCRIAFGSTATACSFTSNDMAACRFLSCHVIPGDRSTCTRLLVPLLDGTECG
LNQWCLKGRCVSASKLSSSQLVHGSWSSWSEYSSCSRTCGGGITYRKRECNNPRPAFGGR
DCEGEGTEAELCNRKLCESNQQEFMAQQCSDTDHQPLQLSAYSTTAYSWIPAVGFISGDA
QCKLMCRSREQDFMVSRGAQFIDGTRCELDGPVTAGSVAACLKGKCKVFGCDGVLHSGKV
EDVCGVCGGNGSTCHLITGSYTGGEAKEYVTFLVLPVNASQVHINNWNPVFTHMAVLMND
EYIVAGDGDIALNTTHPSPLEENHMIYNLYLTPDLLPHTEELILSGPISDKIHIQVYRKY
GREYGDITSPNISYHYYMPDAESVEKIIEGRWSTVISSCSVTCGSGIQRVSQECVDMNTQ
EHLEEKFCVSVTPKPTALQPCHLPDCPPSWVLGEFGPCSAPCGVGERLRSVACSQKRGME
TVALPDSACSQMTKPAATETCNTQLCSTRWQISEPGDCSAVCGPGEAHRPVSCVRFHLGA
DSEVDESLCLHPKPSERVPCVVDVCPIGWETHGKDQQDHKGSLAVILRSKIIPVYVWSPV
IGHCTKTCGNGTQQIWFSCVDHQSQLDVPEFLCDRFSKPEPYTKLCVQSPCPAMWRYIQG
VCSVSCGGGVARRVLYCSQQAAGGDGGMEEVVADSACLPASRPLKVVPCNTEPCPARWQV
GGQGPCSVSCGLGVALRRASCVQFDGKWDREVEDERCEEGKKPPLTVPCFTQACSFHWGV
QEWSECSVSCGYGIQSRTVSCLGPSSPLPITPILCVHLPKPITIQACYYSTNCSTPAPST
APTGEPEAWSKKSAWKLFHEEKRTTSAPAGDTEKFSEVLPTVPVLRSTSTLSTQPPQSSL
CGQLLLQATGIIDLRNVSERRCFISIGRPLDEVIQIKIESSSLNCRHKENLALYERKSLR
QICEKMPGKTLISRSNVLLVRQNRLTPGNGVLLSYQSKKNMKKSHREDCDVQLFSSSGLI
ENPVRSSSSSSSSMQSCRVFIDAPPALRIQIRALSVFNATSSDSAYVLIRDVDAVKTAVF
QGTQLFHWSSTGSRAEVEFHGEYQHIKGTFRAEYSYIKPEEAKLM
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggccgctctgatgtcgctctttctggcgtccgtcctggtggacacggctttcttaacg
actcagatttccctagagaaggattttttacagtctctggcccctgaggacatattccat
tattttggcactaattcaacaacattaatacctgaatttgagcttgtgtgggtgagttgc
tttagagatgagagtggtggaaaacactgctcatttcaagcccaggggaaagacttcaaa
ctgaggtggagaaacgagccatccttgtcctttccctccaacctggagctcgccatcaat
gccacactcagtgtaataaagaggagggataataagtgttgtaagcaacttcacgtactg
aagccagaagatgctagatcttttctctcagtgtgtgatggaaaacttcaaggcctgctt
ctcttgcagtctggaaagcttcacgttcatccactgttccataaacactcagatcacttg
agaaacacggtggtcacacctccaggtgtaccacatctgctcttgccccacccatcaccc
gtgaggacatatcttcaacagtcacagagtcaccgtaggctccagaggtcatttccaggg
gctgaggtcactcatttagagctgctggtggtagtcggccccgatgtccacgaagttcat
aagcaggacacagagaaatacatcctcaccaacctgaacattgcgtccgagctgttacgt
gacgtcactctaggggcaaatataagagtccacttgatccgtatgatcattttcactgag
ccagagccagacattcagatctctgatgacatcacttcctctctgaggagtgtgtgtgag
tggggtcataaagtcaacccttccactgagactgaccctctacatgcagacctgctcttg
tacatcaccaggttcgatttagtcttgcccagtgggaataaacaggtgagaggtgtgacc
cagctgggcggagtctgttctagccaatggaattgcgtaattacagaagatacaggcttt
gacctcggcatcactatagcacatgagattggacacagttttggaataaaccatgatggt
gcaggcaacacatgcagcactggcgggtttataatggggactgatggcggttacaacagt
gtagatctcacctggtctcaatgcagcagagaccagctccttaacttctacagtgcaggc
aaggcagagtgtgtgaaggatgtaccggtgctgggaggatcactgcaggagtggaaaccc
ggactgtattatggtgtggatgatcagtgtcgcatcgcgttcgggagcacagccaccgcc
tgctccttcacaagcaatgacatggctgcctgccgatttctgtcctgccacgtcatccct
ggcgatcgcagcacctgcacccgacttcttgtgccgctgttggacggcactgaatgtgga
ctaaatcagtggtgtttaaagggccgttgtgtatctgcatccaaactgagctcctctcag
ctggttcatggctcctggtcgtcctggtctgaatactcctcctgttcacgcacctgtgga
ggagggatcacgtaccgcaagagagagtgcaacaatcccaggccagcatttggtgggaga
gactgtgaaggagaggggacggaggctgaactttgtaatcgaaagctgtgtgaaagtaac
cagcaggagttcatggcccagcagtgctcagatacagaccatcaaccccttcagctttct
gcatactcaaccacagcctactcatggatacctgcagttggtttcatttcaggtgatgct
cagtgtaagctgatgtgtcgctctcgtgagcaggacttcatggtgagtcgtggggctcag
tttatcgacgggacgaggtgtgaacttgacggccctgtcactgctggttctgttgctgcc
tgccttaaagggaagtgcaaggtgtttggctgtgacggagtgttgcactctgggaaagtg
gaggacgtttgcggggtgtgtggaggaaatggcagcacctgccatcttattactggctct
tacaccggtggagaagccaaagagtatgtcacattcctcgttctgccagtgaacgcctct
caggtccacattaataattggaatccagttttcacacatatggctgtgctgatgaatgat
gaatatatagtagctggagatggggatatagcattaaacaccactcacccttcacctttg
gaggagaaccacatgatctataatctctacctcacccctgacctcctacctcatacagaa
gagctcattctctctggaccaatctcagacaagatccacatacaggtgtatcgcaaatat
ggaagggaatacggagacatcacaagcccaaacatctcctatcattactacatgcctgac
gctgaatctgtggagaagataattgaaggtcgatggtccacagtcatttcatcttgttct
gtaacctgtggctcagggattcagagggttagtcaggagtgcgttgacatgaacactcag
gaacacctagaagagaaattctgcgtctcagttactccaaaaccaaccgccctgcagcca
tgtcacctaccggactgcccacccagttgggtgctgggtgaatttggtccttgcagcgcc
ccctgtggagttggagagcggctgcgttctgtggcctgttcccagaaacggggtatggaa
acagtggcgttgccagattctgcatgctctcaaatgaccaaacctgcggcaacagaaacc
tgcaacactcagctgtgctctaccagatggcaaatctcagagcctggtgattgttcagct
gtgtgtggtccaggcgaggctcacagaccagtgtcctgcgtccgcttccaccttggcgcc
gactcggaggtagacgaaagcctctgtttacaccccaaaccttctgaacgtgtcccgtgt
gtggtggatgtgtgccccattggctgggaaacacacgggaaggatcagcaagaccacaaa
gggtcacttgctgtaatactccggtccaaaataatcccagtgtacgtgtggagccctgtg
atcggccactgcactaagacttgtggaaatggtactcagcagatatggttctcctgtgtg
gaccatcaatcacaactagatgtcccagagttcctttgtgatcgctttagtaaacctgaa
ccgtatacaaagctgtgtgtccagtcaccctgtcctgccatgtggcgctacatacaggga
gtgtgcagtgtgtcctgtggaggtggtgtggcaagaagggtgctgtactgctctcagcag
gctgcagggggagatggaggcatggaagaagtggtagcagactcagcctgtctccctgct
tccagacctctaaaagttgtaccatgtaacactgagccctgtccagcaaggtggcaggtg
ggtggacagggtccatgttcagtgtcctgtggcctgggtgtcgcattaaggagggcctcg
tgtgtccagttcgatggaaaatgggacagagaagttgaagatgagcgttgtgaagaaggc
aagaagcctcctctcacagtgccctgcttcacccaggcctgctccttccactggggtgta
caggagtggagtgagtgttcagtctcttgtggatatgggatccagtctcgaactgtctca
tgccttgggccgtccagtcctctacccatcactcccattctctgtgtccaccttcccaaa
cccattactatccaggcctgctactacagcaccaactgctccactccggctccaagcact
gctcctacaggggaaccagaggcctggagcaagaagagtgcatggaaactcttccatgag
gagaagaggaccacatctgcgccagctggagacacagagaagttctcagaagttctacct
acagtaccagtgttgaggagcacctcaacgttgtcgacacaacctccacagagcagtttg
tgtgggcagctcttgcttcaggctacgggaatcatcgacctacggaatgtcagcgagaga
cggtgtttcatctctattggccgtcctcttgatgaagtcatccaaatcaaaatcgagtcc
agctctcttaattgtagacacaaagagaatcttgccctttatgagagaaagtctctgagg
caaatctgtgaaaagatgcccggaaagacgctgatttcacgatctaatgttctgttggtg
cgtcaaaaccgtctcacccccggcaatggggtgctgctttcctatcagagtaagaagaac
atgaagaaaagccatcgtgaagattgtgatgttcagctgttctcgtcatctggtttgatc
gagaacccagttaggagttcatcatcctcgtcctccagcatgcagtcttgtcgggtgttc
atcgatgccccgcctgcattaaggatacagatcagagcgctatctgtatttaatgcaacc
tcctcagactccgcatatgtgctgatccgagatgtagacgctgtgaaaaccgcagtgttt
caaggcacgcagcttttccactggagttctacaggaagcagggcagaagtggaattccat
ggggagtaccagcacataaagggaacatttagagcagagtattcttatattaagcctgag
gaggctaaacttatgtag
DBGET
integrated database retrieval system
