Ictalurus punctatus (channel catfish): 108265335
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Entry
108265335 CDS
T04658
Name
(RefSeq) ATP-dependent RNA helicase DDX51
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108265335
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108265335
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-60S particles
Helicases
108265335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
T4SS-DNA_transf
Utp25_C
Motif
Other DBs
NCBI-GeneID:
108265335
NCBI-ProteinID:
XP_017323031
Ensembl:
ENSIPUG00000009240
UniProt:
A0A2D0QZ46
LinkDB
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Position
5:complement(5393358..5400345)
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AA seq
658 aa
AA seq
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MALFMINRYLGEEEESKSNGESRSKDLLNKLQERAKARQQLSHATKEESDVQDSKTSERS
RVGKTKRNLERQEKEKKQPKKKRKESVREQDDGNVDVDDTPVEQADLGTSEQSGRKKKKK
DKKGSATQEEKQHTESSGAVDEPESQTTADAQPERSNTSSSFFVLGGFENKTIPKVQRVL
PKWLAEPDMIQRDVKSNLIPLGDMPGICPLLRKKLETNGIQNFFPVQAEVIPAVLESVNS
GLLIGQGGYRPRDICVSAPTGSGKTLAFVIPVVQALMMRVVCEVRALVVLPTKELAQQVY
KVFYHYAEGTGLKVVLAAGKKPFAVEQATLLEVRGGVSRSLADIVVATPGRLVDHINKTQ
GFSLQHLRFLIIDEADRMIDSMQQAWLSQVTKAVYKSGCGSGVSLFRRVEPGPITVASLS
PPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSSTHSSASEEKFNFPQGLTEYYVCCTL
SKKPLLILHFLLRLKFYPVLCFTNSREAAHRLFLLVKLYGGVEVAEFSSRLNPSERQKTL
KNFEKGKIQLLISTDAAARGIDIKGVKCVINYDAPQYIRTYIHRVGRTARAGKAGVAFTF
VLGVQVERFVKMVQDGGSPGLQKQTIKPESLRGMESRYEDVLVELGRVIKEETAHKHF
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggctctcttcatgattaaccgatatctaggcgaggaggaggaaagtaaatcaaatggc
gagtcaaggtccaaagacttgctaaacaagctccaggaacgtgccaaggccagacaacaa
cttagtcatgcaactaaggaggagtcagatgtccaggattcaaagacgagtgaacggagc
cgtgtaggaaagactaaaagaaatctcgagcggcaagaaaaagagaaaaagcaacctaag
aagaagagaaaggaaagcgttcgagagcaggacgatggtaatgttgatgttgatgacacg
cctgtggaacaagcagatttgggtacgagtgagcagtcgggaaggaaaaagaagaaaaaa
gacaaaaagggaagcgcaactcaagaggagaagcaacacacagagtcctctggagcagta
gatgagcctgaaagccaaacgactgcagatgcccagcctgagcggtcgaacacaagctcc
agcttttttgtcctgggtggatttgagaataagacgattccaaaggtccaaagggtgctg
ccgaagtggctggctgaaccagacatgattcagagagacgttaagagcaatttaatccct
cttggtgacatgccaggaatttgtcccttgctacggaaaaaactggagaccaacgggatc
cagaacttcttcccagttcaagctgaggtcatccctgctgtcttggagagtgtgaattca
ggtcttctgattggacaaggaggttacaggcccagagacatctgtgtgtccgcgcctaca
ggaagtggaaagacgctggcatttgttatacctgtcgtacaggcgctgatgatgcgagtg
gtgtgtgaagtccgtgccctggttgtgttgcccaccaaagagctcgcgcagcaggtgtat
aaagttttctaccattatgctgaaggaactgggctaaaagttgtattggctgctgggaag
aaaccttttgctgtagagcaggcaactcttttagaagtcagagggggtgtcagtcggagt
ttggcagatattgtcgtggcaacaccaggtcgtctggtagatcacatcaacaaaacccaa
gggttcagtcttcagcatcttcgttttctgattatagacgaggcagaccgaatgattgac
agtatgcagcaggcttggctcagtcaagtgaccaaggcggtctataaaagtgggtgtggc
tcaggggtgtcactctttaggagggtggagccagggccaattacagtggcaagtctgtct
ccaccccagatgccgctgcagaagctgctcttctcggccactctgacgcaaaacccggag
aaactgcagcagctgggcctccaccagcctcgtctcttcagctccacacacagctcagca
agcgaagagaaattcaacttccctcagggcctgactgagtactacgtctgctgcacgctg
agcaagaagccgcttctcattctgcactttctgctgcgcctgaagttctatcctgttctg
tgcttcacaaactcgagagaagcagcacacaggctcttcttactggtgaagctttatggt
ggtgtggaagtggcagaattctcctccagactcaatcctagcgagcgacagaagactctg
aagaattttgaaaaagggaaaattcagctgttgatcagcactgatgctgcagccagagga
atcgatattaaaggagttaaatgcgtcattaattatgatgctcctcagtacatcaggacg
tacatccacagggtgggaagaacagcgagagctgggaaagctggcgtggccttcactttt
gtcttaggagtgcaggtggagaggtttgtgaagatggtccaggacggcggcagtccgggt
ctacagaagcagactattaaaccggaaagtctcagaggcatggagagccgctatgaagac
gttttagtcgagctgggcagagttataaaggaggaaactgcgcataagcatttctga
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