Ictalurus punctatus (channel catfish): 108265354
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Entry
108265354 CDS
T04658
Symbol
slc44a5b
Name
(RefSeq) choline transporter-like protein 5-B isoform X5
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108265354 (slc44a5b)
04147 Exosome [BR:
ipu04147
]
108265354 (slc44a5b)
Transporters [BR:
ipu02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
108265354 (slc44a5b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
108265354 (slc44a5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
108265354
NCBI-ProteinID:
XP_017323071
Ensembl:
ENSIPUG00000002235
UniProt:
A0A2D0QZ83
LinkDB
All DBs
Position
5:35215166..35233461
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AA seq
723 aa
AA seq
DB search
MGRKTPLSPSYCGEPHKFDPKFRGPVRNRCCTDTLCCVFFVIIILSYIALGTVAWMHGDP
RKVIYPTDSYGQFCGQQDTANENKAVLFYFNILQCANPAVLINLQCPTTQLCVSECPDRF
ITYVDVQYSYSRNRSQWDYYRQFCRPGFNTPTKSVVQVIRDEDCPSMLVPSRPFLQRCFP
DFITRNGTLTVANKTIFKDGLGKSRSVSELRDAANGISSLLDAKEIGVKIFEDFARTWFW
ILIGLVITMVISLLFIFLLRLMAGVLLWSVIFCLIGAVGYGIWHCYWEYRTLKGKPDADV
SITDLGFHTDFRIYLQLSQTWLIFMIVLAVMEAVIILVLIFLGRRVCIAIALLKEGSRAI
SYVTSTLFYPIITFLLLAVCIAYWATTAVFLASSGEAVYKVISAQPDCKYSNMTCDPQTF
SQGNVSSVCRGSQCVFAFYGGESVYHRYMAVLQLCNVFVLLWLVNFVLALGQCTLSGAFT
SYYWTLNKPADIPACPVSASFRRTLRFHTGSLAFGSLILSTVQFIRIVLEYLDHKLKGVH
NALARFLLCCLKCCFWCLEHVIRFMNRNAYIMIAIFGRNFCASARDAFFLLMRNVMRVAV
LDKVTDFLLFLGKILISGSVGVLAFFFFTRQIPVFQEKVPSLNYYWVPLLTVVFGSYLVA
HGFFSVYAMCVDTLFLCFLVDLEKNDGSASRPYYMSSSLRSILNNKNHGRTEERKRGGAL
RRK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggaaaactccactttctccgtcctactgcggtgaacctcacaagtttgatccg
aagttcagaggacctgttcgcaacaggtgctgtacagacacgctctgctgtgtcttcttt
gtcataatcatcctcagctacattgctctgggaacagttgcatggatgcatggtgaccct
cggaaagtgatttaccccacagacagttatggccagttctgtggccaacaggataccgct
aatgaaaataaagccgtactgttttacttcaacattttacagtgtgctaatccagcagtg
ctcatcaatctgcagtgtcctacaacgcagttgtgtgtgtcagagtgtccggacaggttt
attacatatgtggatgtacagtatagttacagcaggaaccggagtcagtgggattattac
agacagttctgcagacctggattcaacacgcccactaagtctgttgttcaggtgatcaga
gatgaagattgtccctcgatgctcgttcccagcagacctttcctgcagaggtgtttccct
gatttcatcaccagaaatggcactttaaccgtcgccaacaaaaccatctttaaagatgga
ttgggtaaaagcaggagtgtttctgagctgagagacgccgccaacggtatttccagtctg
ctggatgctaaagagattggagtgaagatctttgaggacttcgccaggacctggttctgg
attctaataggtctggtcattaccatggtgatcagtctgctgtttattttcctcctgaga
ctgatggctggagtcttactgtggagtgtgatattttgtttaattggtgcagtgggatat
gggatctggcactgttactgggagtacaggactctgaaagggaaacctgatgctgatgtg
tccatcactgatcttggctttcatacagatttcaggatttatctgcagctgagccagacc
tggctgatcttcatgattgtgctggcagtgatggaggctgtgatcattttggtgttgatc
tttttggggaggagagtgtgtatcgccatcgctttgctcaaagagggaagcagggcgatc
agttacgtaacatcgacattattttatccgattatcaccttcctcttgctcgcagtctgt
attgcttactgggccacgacagctgtttttctggcctcgtctggtgaagctgtgtataaa
gtgatttcagcacaaccagactgtaaatacagcaatatgacctgtgaccctcagacattc
agtcaggggaatgtgagcagtgtgtgtaggggttctcagtgtgtgtttgcgttttatggc
ggtgagagtgtgtatcatcgctacatggcggttctgcagctgtgtaacgtgtttgtgttg
ctgtggttggtgaacttcgtgctggcgttggggcagtgcacgctctctggagctttcacc
tcctactactggaccttgaacaaacctgctgatatcccagcatgccctgtatctgcctcc
ttcagacgcacactcaggttccatacaggttctctggccttcggttctttgatcctgtcc
acagttcagttcatccgcatcgttctggaatacctggatcataaattgaaaggtgttcat
aatgctcttgcacgtttcctgctctgttgcctgaaatgctgcttttggtgtcttgagcac
gtcatcaggttcatgaacagaaacgcttacatcatgattgcgatatttgggaggaatttc
tgtgcctcagcgagagacgcctttttcctgctgatgaggaatgtgatgagggtggcggtg
ttggataaagtcactgatttcctgctgtttctggggaaaatcctgatttcaggaagtgtc
ggcgtcctcgcattcttcttcttcactcgtcaaattcctgtgtttcaggaaaaagtgcca
tcactaaactattactgggtccccctgctgacggtggtgtttggatcgtatcttgtggct
catggattctttagtgtctacgccatgtgtgtggatacgctgttcctctgcttcttggtg
gatctggagaagaacgatggctctgcatctcggccgtactacatgagcagctcactgagg
tccatcctgaacaacaagaaccacgggagaaccgaggagaggaaaaggggcggagctctg
aggaggaagtga
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