Ictalurus punctatus (channel catfish): 108265374
Help
Entry
108265374 CDS
T04658
Symbol
si:dkey-32e23.4
Name
(RefSeq) dynamin-1-like protein isoform X2
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04217
Necroptosis
ipu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108265374 (si:dkey-32e23.4)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108265374 (si:dkey-32e23.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108265374 (si:dkey-32e23.4)
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108265374 (si:dkey-32e23.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108265374 (si:dkey-32e23.4)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
108265374 (si:dkey-32e23.4)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
108265374 (si:dkey-32e23.4)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
108265374 (si:dkey-32e23.4)
RhoA-dependent endocytosis
108265374 (si:dkey-32e23.4)
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
108265374 (si:dkey-32e23.4)
Retention of mitochondria
108265374 (si:dkey-32e23.4)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108265374 (si:dkey-32e23.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
FeoB_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
108265374
NCBI-ProteinID:
XP_017323114
Ensembl:
ENSIPUG00000007113
UniProt:
A0A2D0QXI0
LinkDB
All DBs
Position
5:complement(4212389..4235476)
Genome browser
AA seq
658 aa
AA seq
DB search
METLIPIINRLQEVFLTVGAEVIQLPQIVVVGSQSSGKSSVLESLVGRDFLPRGSGIVTR
RPLVLQLVNVPALEERRKQENGIKAEEWGTFLHCKHQVFTDFTEIRNEIEEETERIANNK
GISAEPIHLKIYSPNVLNLTLVDLPGITKVPVGDQPEDIETQVQEMILSFISNPNSLILC
VSPANSDLATSDALKLAREVDPDGRRTLLVVSKLDLMDAGTDALEVLLGRIIPVRLGIIG
VVNRSQHDLNTRKSVADACRDEQAFLQRYYPSLASRCGSRHLARTLSRLLMHHIRDCLPE
LKARVTTLSAQFQARLSSYGQPVEDYSATLLQIVTKFASDYCNTIEGTARHIQTSELCGG
ARICYIFHETFGRTLQSIDPLGGLTELDVLTAIRNATGPRPALFVSEVSFELLVKKQIKR
LEEPSLRCVELVHEELQRIIQHCSSHSTQELLRFPKLHESIVEVVTSLLRKRLPITNEMV
HNLVAIELAYINTKHPDFTDAAQVSASVNSQQTESLDGGKRWKNDKMLSEEKGSVPGFGS
PTKAVNLLDTALPISRKLSAREQRDCEVIQRLIKCYFLIVRKNIQDSVPKAVMHFLVNFV
KERLQSELVGQLYKQPLLQELLIESQETAQQRTEVAHMLEALQKANNIISEIRETHLW
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggagactttaattcccatcattaaccggctgcaggaggtctttctcaccgtcggagcc
gaggtcattcagctccctcagatcgtcgtagttggctcacagagcagcgggaagagttct
gtgctggaaagtctggtcggacgagattttttaccccgtggttcaggaatagtcacgcgg
cgccctctagtgttgcagcttgtgaacgtcccggcactggaggagcgccggaaacaggag
aatggaatcaaagctgaggagtggggaaccttccttcactgcaaacaccaggtttttacg
gatttcaccgaaattcgaaatgaaatcgaggaggagactgaacgcatcgctaacaacaag
ggtatcagcgcagaacccatccacctgaagatttactcccctaacgttctaaacctcacc
ttagtcgacttgcctggaatcaccaaggtgccagtaggtgaccagccagaagatattgag
actcaggttcaggagatgatcctgtccttcatctccaaccctaactccctgattctgtgt
gtatctccggctaactcagacctggccacttcagacgcactaaaactggcccgtgaggtc
gaccctgatggtcggagaactctgctcgtcgtgagtaaactcgatctgatggatgctggg
acggacgcactggaggttctgcttggacgcatcattcctgtcaggctcggcatcatcggc
gtggtcaacaggagccagcatgacttgaacactcggaaaagcgtagcagatgcgtgccgt
gacgagcaggcgttcctgcagcgctactatccgtctttagcgtcacgctgtggctcacgc
cacctggcacgcacgctgagccgtctgctcatgcaccacatccgcgactgtctgcccgag
ttaaaggcacgcgtgacgacgctgagtgcccagttccaggcgcgtctgagcagctacggg
cagccagtggaagactacagcgccaccctgctgcagatcgtcaccaagtttgcttcggac
tactgcaacaccatcgagggcacggcccgacacatccagacctctgagctatgcggcggc
gctcggatctgttacatattccacgagacgtttggccgaaccctgcagtccatcgacccg
ctgggaggactcaccgagctggacgtcctcacggccatccgaaacgccacgggtccacgg
ccagcgctgtttgtttctgaggtgagctttgagctgctggtgaagaagcagattaagaga
ctggaggagccgagcctgcgttgcgtggagctcgtccacgaggagctgcagaggatcatc
cagcactgctcgtcccacagtacacaggaactgttgcgctttcccaaactgcatgagtca
atagtggaggtggtcaccagtttactcaggaaacgtcttccaatcaccaatgaaatggtc
cataatctagtggcaatagaacttgcgtacatcaacactaagcacccagacttcacagat
gctgcacaagtgtctgcttctgtcaacagccaacagactgagtcactagatggaggaaag
cgctggaagaacgataagatgttgtcggaggaaaaaggctcagtgcctggatttggaagc
cctaccaaagcagtcaacctattggacacggccctgccgatctctcgaaagctgagtgca
cgtgagcagcgggactgcgaggtcatccagcgcctcatcaagtgctacttcctcattgtg
cgcaagaacatccaggacagtgtgcccaaagcagtgatgcacttcctggtgaactttgtg
aaggagcgtctgcagagcgagcttgtgggtcagctgtacaagcagcctctgctgcaggag
ctgctcattgagtctcaggaaacggcacagcagcgcactgaggtcgcccacatgctggag
gcgctccagaaagccaacaacattatctccgagatccgagagacccacctgtggtag
DBGET
integrated database retrieval system
