Ictalurus punctatus (channel catfish): 108265378
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Entry
108265378 CDS
T04658
Symbol
acsl2
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00061
Fatty acid biosynthesis
ipu00071
Fatty acid degradation
ipu01100
Metabolic pathways
ipu01212
Fatty acid metabolism
ipu03320
PPAR signaling pathway
ipu04146
Peroxisome
ipu04216
Ferroptosis
ipu04920
Adipocytokine signaling pathway
Module
ipu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108265378 (acsl2)
00071 Fatty acid degradation
108265378 (acsl2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108265378 (acsl2)
09143 Cell growth and death
04216 Ferroptosis
108265378 (acsl2)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108265378 (acsl2)
03320 PPAR signaling pathway
108265378 (acsl2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ipu01004
]
108265378 (acsl2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108265378 (acsl2)
Enzymes [BR:
ipu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108265378 (acsl2)
Lipid biosynthesis proteins [BR:
ipu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108265378 (acsl2)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of breast milk
108265378 (acsl2)
Exosomal proteins of breast cancer cells
108265378 (acsl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108265378
NCBI-ProteinID:
XP_053536077
UniProt:
A0A9F7R9P9
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All DBs
Position
5:4296609..4320854
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AA seq
707 aa
AA seq
DB search
MQLQEWLRSFRLGSGDLGSTEVADLRTLLPSLALSPPSLLGLGAVASLTAYWLATRPRSI
RPPCDLKAQSIPVQGDASCRRSALLKDDNLLDFYFEDTKTVYDMFQRGLRIAGDGPCLGF
RKPGKPYQWISYTEVAERAQVLGSGLLAKGCKPTPKQFVGIFAQNRPEWVITEMACYTFS
MALVPLYDTLGLEAMVHILSLAEISLVVCDKEEKAESLLVNKENGVTPTLSCLVLFNPVS
AALVERGRNCGVEILQLEQLMDLGRENLQAPVPPQPQDLAVVCFTSGTTGKPKGAMITHG
NITSNASSVIKILEGFFEIRQEDVSISYLPLAHMFERMIQVSMFCHGARVGFYQGDISLL
MDDIKTLKPTFFPVVPRLLTRIYDKIQGSVTSVLRRAVLHYAVSRKQAELSSGIVRNDSV
WDRLVFGKIQASLGGNLRFILTASAPISPTVLSFLRAALGCLIFEGYGQTECTAGCTFSM
PGDWSAGHVGAPLPCSLVKLTDIPDMNYYAKSGQGEICIRGPSVFQGYLRDEERTAEALD
SDGWLHTGDVGQWLPNGTLRIIDRKKNIFKLSQGEYIAPEKIENVYMRCVPVLQVFVHGD
SLQSYLIGIVVPDPEVFVNWAKERGIVGSYDELCQNPDVKKAVLEDMTAVGKEAGLKSFE
QVKDLYLHPEMFSISNGLLTPTLKSKRVDLRRVFSEQITHMYSKSAM
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcagttacaggagtggttgcgttcctttcgtctcggcagcggtgatttagggagcact
gaagtagcggatctgaggactctgcttccctccctggcactctctcctccatctctcctc
gggctcggcgccgtggcatcgctcacggcctactggctggcgacccgacctcgctccatc
cggcctccatgtgacctgaaggctcagtccatacctgtgcagggagatgccagttgcaga
cggtccgccttgctgaaggatgataatctactagacttctactttgaggatacgaagacc
gtgtatgacatgtttcagagaggcctgagaatcgcaggtgatgggccgtgtcttggcttt
aggaaaccgggaaagccataccagtggatctcctacaccgaggtggcagagagggcgcag
gtgctgggctccggtctgctggccaaaggatgcaagcctactcctaaacagttcgttggc
atcttcgctcagaacaggccagagtgggttattacagagatggcctgctacaccttctcc
atggcgttggtgcctctgtatgacacactgggcctggaggccatggtgcacatcctcagc
ctggcggagatttctctggtggtctgtgataaggaggagaaggctgagtctctgttggtg
aataaggagaatggagtgactcctactctatcctgtctggtgctctttaaccctgtgagc
gccgccctggtggagagagggaggaactgtggcgtggagattttgcagctcgaacagctc
atggatttgggcagggaaaatctccaggctccagtacctcctcagcctcaggacctggct
gtggtgtgtttcaccagtggaactacaggaaagccaaaaggagccatgatcacacacggc
aacatcacctccaacgcctcctccgtcattaagattctggagggctttttcgagattcgc
caggaggacgtgtcgatctcgtacctgcccctcgctcacatgttcgaacgcatgattcag
gtgtctatgttctgtcatggagcgagagtgggcttctatcagggggacatctcgctgctc
atggacgacatcaaaactctgaagcccactttcttccccgtggtgccccgcctactcacc
cgcatctacgataagatccagggttcggtgacatcggtgttgaggagggccgtcctacac
tacgccgtgagcaggaaacaggccgagttgagcagtggaatcgtccggaatgacagcgtg
tgggacagactggtcttcgggaagatacaggccagtctgggaggaaacctgcgcttcatc
ctgactgcttcggctcccatctcgcccacagtgctgtccttcctccgagctgccctcggc
tgcctgatattcgagggctacggtcagactgagtgcacggctggctgtacattctctatg
cctggagactggagcgcaggccacgttggtgctcctcttccttgttccctggtgaaactg
accgacattccagacatgaactattatgccaagagtggacagggagagatctgtatccgg
ggtcccagtgtatttcagggttacctgagggacgaggagaggacggccgaggctctggac
agtgacggctggctgcacacaggggatgtgggtcagtggctgccgaatgggactcttcga
atcatcgacagaaagaagaatatatttaaactgtctcagggagaatacatcgctccagag
aagattgagaacgtctacatgcgctgtgtacctgtgctgcaggtgtttgtgcatggagac
agtctacagtcttatttgataggtatcgtggtcccagacccagaagtgtttgtcaactgg
gccaaagaaagaggaattgtgggatcgtatgatgagctctgtcagaatcctgatgtgaag
aaagccgtgctggaggacatgactgcagtggggaaggaagcaggactgaagtcttttgag
caggtgaaggatttgtatctgcatccagagatgttcagcatcagtaacggcctcctcact
cccaccctgaagagcaagcgggtggacctgcgccgcgtcttcagcgagcagatcacacac
atgtacagcaaatcagccatgtag
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