Ictalurus punctatus (channel catfish): 108265394
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Entry
108265394 CDS
T04658
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00310
Lysine degradation
ipu00514
Other types of O-glycan biosynthesis
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108265394 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
108265394 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108265394 (colgalt2b)
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
108265394 (colgalt2b)
Glycosyltransferases [BR:
ipu01003
]
O-Glycan biosynthesis
O-linked Gal type
108265394 (colgalt2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
108265394
NCBI-ProteinID:
XP_053536443
Ensembl:
ENSIPUG00000015337
UniProt:
A0A9F7RH70
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Position
5:32958651..32992127
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AA seq
612 aa
AA seq
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MMAELCALRLGVLCALLCASACVSVDADLDPVRPESAVLKPRVMIAVLARNSAHSLPHFL
GCIDRLEYPKERMAIWAATDHNMDNTTAVLKEWMKSARRQYHYVEWRPMEEPRSYTDEWG
PKHWPLSRFNHLLKLRQAALEAARHRWADYILFVDSDNLLTNPRVLDLLIAENRTLVAPM
LESRSLYSNFWCGITPQGYYKRTPDYQPIREWRRLGCFPVPMIHSTFLLDLRRSSSRALA
FHPPHPDYSWAFDDIMVFAFSTREAGVQMFVCNKEHYGFLPIPLKAHQSVEDEEESFTHT
ITEALIDHQVEPSEFVFVPPKTQDKMGFDEVYLINLKRRRDRRERMLNSLAALGVVVTII
NAVDGKALNSSQLHALGIEMMPDYKDPYSGRVLTRGEIGCFLSHHSIWTQMVEKGLERVL
VLEDDVRFEPRFKRRLQTIMKDVEKVQLDWDLIYVGRKRMQVAQPELSVDGVNNLVEADY
SYWTLAYALSLNGANKLLSAQPFTRMLPVDEFLPVMFNKHPNTAYMSHFEKRDLRAFSVE
PLLVYPTHYTGEPGYFSDTETSTIWDDEAVSTDWDRSHAQKTAQQGRIRPIAQNSVTGET
PPPAARASRDEL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgagctgtgcgcgctgaggctcggcgtgctgtgcgcgctcctgtgcgcgtct
gcgtgcgtgtcggtggatgcggatctggatccggtgcgtccggagtctgcggtgctgaag
ccgcgggtgatgatcgcggtgttggcccggaactctgctcacagcctgccgcacttcctg
ggctgcatcgaccgcctggagtaccccaaagagcgcatggccatatgggcagcaacagat
cacaacatggacaacaccacagccgtgctgaaagagtggatgaaatcggctcggaggcaa
tatcactacgtggagtggagaccgatggaggagccgcgctcttatacagacgagtggggg
cccaagcactggccgctgtcccgatttaaccacctcctgaagctcagacaggctgctctg
gaggccgcacgccaccgatgggccgactacatcctgtttgtagacagtgataatctgctg
actaacccgcgtgtgttggacctcctgatagcggagaatcggactctggtggcacccatg
ctggaatcacgttctctctactccaacttctggtgtggcatcacccctcagggctactat
aagcgaaccccggactatcagcccatccgtgagtggaggcgtctgggctgcttccctgtt
cccatgattcactccaccttcctgctggatttgagacgcagctcttctcgcgcgctggcc
ttccacccgccacatcccgactacagctgggccttcgatgacatcatggtgtttgctttt
tccactcgcgaagcaggtgtacagatgtttgtgtgtaacaaggagcactatggtttccta
cccattcctctgaaggcccatcagagtgtagaggatgaagaggaaagtttcacacacacc
atcaccgaggcactcattgaccaccaagtcgagccttcagagtttgtgttcgttcctcca
aaaactcaggataagatggggtttgatgaggtctacctgattaatctgaagcggaggaga
gaccggagggagcggatgttgaattctctggccgctctgggtgtggtggtcactatcatc
aacgctgtggatggcaaggctctgaactcgtctcagctgcacgccttggggatcgagatg
atgccggattataaagatccgtattcaggcagggtgctgaccagaggagagatcggatgc
ttcctcagccaccactctatatggacacagatggtcgagaagggtctggaaagggtgtta
gttctggaggatgatgtgagatttgagcccaggtttaagaggaggctgcaaaccatcatg
aaggatgtggagaaggttcagctggactgggatctcatctatgtggggcgtaagcggatg
caggtggcgcagcccgagctctctgtggatggagtgaataacctggtggaggctgattac
tcgtactggacgcttgcgtacgctctctctctgaacggagccaacaaactgctctcagct
cagcccttcacgcgcatgctgcctgtggacgagttcctgcccgtcatgttcaacaaacac
cccaatacggcctacatgtcccactttgagaagcgggatttgcgagcgttctcggtagag
ccgttgctggtttacccgacacactacacaggcgagccgggttacttcagcgacactgag
acgtccaccatctgggacgacgaggccgtcagtacggactgggaccgatcccacgctcag
aaaaccgcccaacagggccgcattcggcccatcgcccagaacagtgtgactggggaaacg
ccacctcctgctgcccgtgcatcacgagacgaactgtga
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