Ictalurus punctatus (channel catfish): 108265427
Help
Entry
108265427 CDS
T04658
Name
(RefSeq) nuclear receptor corepressor 2 isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108265427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108265427
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
108265427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
PRP38_assoc
DUF4518
Motif
Other DBs
NCBI-GeneID:
108265427
NCBI-ProteinID:
XP_017323208
Ensembl:
ENSIPUG00000004773
UniProt:
A0A2D0R0B1
LinkDB
All DBs
Position
5:3172034..3256813
Genome browser
AA seq
2333 aa
AA seq
DB search
MSSHPQPVPQSRRAVEARHLPSAAGLPLQIARTHTDVGIVDYHARDFGSHLSHGTLSQSH
RRRPSLLSEFQPGNERGAESHIRYDHMYLPDANSQSEVEYGEIKRPRLEMGAEPLMRHLP
QRLPLPLTGAEDVVKERSGSSSMGKIEPISPVSPAVMEADLELVPTRFSKEELIQNMDRV
DREITMVEQQISKLRKKQQQLEEEAAKPQEPERSISPPPSEAKHRSLVQIIYDENRKKAE
EAHRILEGLGPRVELPLYNQPSDTKQYHENIKINQVMRKKLILYFKRRNHARKQWEQKFC
QRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQREMQERMQNRVGQRGS
LASAARSEHEVSEIIDGISEQEILQGVCKLMSSTNSEKQMRQLAVIPPMLFDAEQQRIKF
INMNGLMGDPMKIYKDRQVMNMWSDQEKDTFREKFIQHPKNFGLIASFLERKTVAECVLF
YYLTKKNENYKNIVRRNNRRRGRSQNNQQQQQQQQQQQQQQQQQQQQQQLQQQQQQQQQQ
VNRNNQEEKEDKEAEKEGERDEDKNDADDKEDGMKDDTSGEDGEDKDPPVAVKGRRTANS
RGHRKGRITRSMANEQDESSSPPLSGELANLEMNESSRWTEEEMETAKKGLLQYGRNWSS
IAKLVGSKTVSQCKNFYFNYKKRQKLDEILQQHKMKSEQERKARRKGKALQNEETSAPSA
ADEEEMEGSGGSGNEEEAQEDGEGGPNQSSDTESLPSPHSSESSKAKDSGSDRFKSAPTT
TSASGSSSDKDTPEEEKPQVKCEQGSVKQEERPEGTDGAKEVQGEVEDKKPPTLEVEELK
REGRKREREHGGRDSDSSATCSADEVEETDNAEKNRITSPRPSLLSYAHDGVISTALQKP
LDLKQLKQRAAAIPPIMPDISLAGGGVLGKQQVMPDAQALYEQQIIMAHESSQGAKQQLA
QPIKSQHYPGVMAEAGSPRMRARTPTPSEREKEELEGGMERWLHSLLHGLHKPRAFSPLA
DMKKDPGPDHIRAMGLGRPVMSPYQLSPRDMAKLSHEQLLHYNPSLPQQERLAGVRPLHI
PDPPPLISSAKPGGSITQGTPVQMHSPAHGSEHAKMTAGALPLSWMEQRKLAGFPVVKQE
QLSPRGLSSSQAENLSTHGIAHESLAARGPMPAVQGGSITKGLPGTRVHQESSITYRGGS
ITQGTPADVLYKGTITRLIAEDSPSRDRSRDENQAKGHVLYEGISGHILSYDRAPNPKDE
GRGEVLGLKRPYEVMEGGGISRVLPLRDSLSSAEGLMGRAMPQERESPRPHHIRGSISQG
IPRHVESQEEYSRREPKQLKRESSPSPRGPDTNKGRPHDGVVPTVKEGGRSIHLIPPEGV
LMSKAPKEGSITQGTPLKMEPAGSSKRHDVRSIISSSPRPYSGLPPHLERGHYDEPGPKS
RPSAVVSTSSSLVLGAEQAGKSHHSPVGYDEHKRAGYAASSHRGSPLTSRDTPQRPHEGS
AKVPQQERKSTPTPREMRATKSPLPVVGDHAASLASYERLLQGLGADMYRGQIPLPFDPA
ALPRGIPIDPAAYYLPRHLAPAPGYPHPYPHYLIRGFPDTAALENRHTLFTDYITSQQMH
QWPAAAMTQRSDLLRAPRDSPLPLSYSPSTRGASASQMDRINYHPGTPTTFPSRVYTTSP
ISPVGSSHIGKLQGTPTERERERERERERDRERERDRERDRERERERERERERDRERERE
RERERERDRDREREKSLGHGNVEHAPIWRPGAAEQTGSSSSSSSRPPSLPYSHQASPMSP
RPQESLQHRPTVLHNTSSKTLQSSEHSSPSVLRSVPQSSSRYPNYSGHLQRVSEAYPDSS
AVKELSREPSKSQSRGVPPKSESAKMSSPSGGGVYSSAFAQAPGGHMGLAAGRGLPVTAT
ESGIVNRDKTQNKDHELRALAQQKALEHSVFFIPEERLSPSQQPPSPAVKSSQRVVTLAQ
HISEVIKKDYMRQSQQVQAGGQPVFGYHSSPVLDLTRPPSAPQTPSEPSVSSRFTPEGSV
GDRLRDRSPPQSKVSPVSLSAECIEPVSPPGGVSEPESQAAACPSEQAEQGMGSRSPSSS
SQPPAFFSKLTENNSAIVKSKKEMIKKMVVGNDNDFNSGQPGTEIFNMPASATGGSVSMR
SQPPPDSSGNTIGLEAIIRKALMGKYDEQADERSASNSGPPAAADPRTEEPYSLPGKSKS
SGRSNGRKTKSPGPGLSGGERPSSVSSVHSEGDCNRRTPLTNRVWEDRPSSAGSTPYPCN
PFTMMRLPGSVMSGPSPSPTQPAAGPPQPQSRTWEEEPKPLLCSQYETLSDSE
NT seq
7002 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcatccgcagccggtgcctcagagccggagagccgtggaagcccgacacctg
ccgagcgcagccggccttcctctgcagatcgcccgcactcacacggatgtcggtatagtg
gactaccacgctcgggacttcggttcccatctctcccatggaactctgtcccagtctcat
cgccgcagaccgtccctgctgtcggagtttcaacctgggaatgagagaggcgcggagtcc
cacatccgctacgatcacatgtatctgcccgacgccaacagccaatcggaggtggagtac
ggcgagataaagcggcctcgcctggagatgggggcggagcctctaatgcgccatctgcct
cagcgcctgcccctgcctctgaccggagccgaggacgtcgtgaaggagcgtagcggcagc
agctcgatggggaagatcgagcccatctctccggtgagtccggcggtgatggaggccgac
ctggagctggtgcccacgcgcttctctaaggaggagctgatccagaacatggaccgcgtg
gaccgagagatcaccatggtggagcagcagatctccaagctgaggaagaaacagcaacag
ctggaggaagaggcggcgaagccccaagagccggagcgcagtatttctcccccacccagc
gaagccaagcaccgcagccttgtacagatcatctacgatgagaaccggaaaaaagcagag
gaggctcatcgtatcctagagggactgggaccccgagtggaactgccgctgtataaccag
ccgtctgataccaagcagtaccacgagaacattaaaataaatcaggtgatgaggaagaag
ctcattctctacttcaagaggcgaaaccacgcccgcaagcagtgggagcagaagttttgt
cagcgctatgaccagttgatggaggcttgggagaagaaggtggagcgcatagagaacaac
cctcggcgcagggccaaagagagcaaagtgcgcgagtactacgagaagcagttccccgag
atccgcaaacagcgagagatgcaggagcgcatgcagaacagggtgggtcagcgtggtagc
ctggcgtctgcagcacgcagtgaacacgaagtgtctgagatcatagacggcatttccgaa
caagagattctacaaggcgtatgtaaacttatgagctcaacgaactcggagaaacagatg
cgtcagctggccgtcatcccgccgatgctgtttgacgccgagcagcagaggataaagttc
attaatatgaacggtctgatgggcgaccccatgaagatctataaagacagacaggtgatg
aacatgtggagcgaccaggagaaagacaccttccgagagaaatttatccagcaccctaag
aactttggcctgatagcctcctttctggagagaaagaccgtggcggagtgcgtcctcttc
tactatctgaccaagaagaacgagaactacaagaacatcgtccgcaggaacaaccgccgc
cggggccgcagccagaataaccagcagcagcagcagcagcagcagcaacagcagcagcag
cagcaacagcagcagcaacagcaacaactgcagcagcaacagcagcagcagcagcaacaa
gtgaaccgcaacaaccaggaggagaaagaggacaaggaggcggagaaggagggagagcga
gacgaggacaagaacgacgcagatgacaaggaggatgggatgaaagatgacacgtcagga
gaggacggcgaagataaagatcctcccgtagccgtgaaagggcgtcgtacggccaacagc
cgcggccaccgaaaaggcaggatcactcgctccatggccaacgagcaggacgaaagcagc
tctccccctctcagcggcgaactggcaaacctggagatgaatgaaagctctcgctggacc
gaagaggagatggagacggccaagaaaggacttctccaatatggccgcaactggtcgtcc
atcgccaagctggtgggctccaagaccgtctcgcagtgcaagaacttctacttcaactac
aaaaagaggcagaaactggacgagatcctgcagcagcataaaatgaaatcggagcaggag
cgtaaggccaggcgtaaaggtaaagcgctgcagaacgaggagaccagcgctccctctgct
gccgatgaagaggagatggagggatccgggggcagcggcaacgaggaggaagctcaggag
gacggagagggaggccctaaccagagctcggatacggagagcctcccgtccccgcactcc
tcggagagcagcaaggccaaagattcgggctcggaccgcttcaagtccgcgcctaccacc
acgtctgcgtcgggatcctcctccgacaaagatacgccggaggaggagaagccgcaagtc
aagtgcgagcagggatccgtgaagcaggaagagcggcccgagggaaccgacggggcgaag
gaggtgcaaggggaggtggaggataagaagccccccactctggaggtggaagaattgaag
agagaaggaaggaaaagggagcgggagcacggagggcgagacagcgactccagcgctacg
tgcagcgccgacgaggtggaggagacggacaacgcggagaagaacagaatcacatctccg
aggccgagtctgctgagttatgcccacgacggagtgatctcaactgcactgcagaaacca
ctggacctcaaacagctcaaacagagagctgctgctatacctcccataatgccggacatc
tctttagccggtggcggcgtgctggggaagcagcaggtgatgcccgacgctcaggcgctc
tacgaacagcagatcatcatggcacacgagtcctcccaaggagccaagcagcagctcgcg
cagccgatcaaatcgcagcattaccccggcgtcatggccgaggccggcagccctcggatg
cgagccagaacgcccacgccctcggagagagagaaagaagaactggagggggggatggaa
agatggctacacagtctgcttcacggattacataaaccccgggcgttctctcctcttgct
gacatgaagaaagatccgggcccggaccacatcagagccatgggtctcggtcgtcctgtg
atgtcaccgtaccagctttctcccagagacatggccaagctgagccacgaacaactcctg
cactacaacccctctcttcctcagcaggagaggctggctggtgtgcggccgctgcacatc
cccgatcctcctcccctcatttcctcggccaaaccaggcggctccatcacacagggaact
ccagtgcagatgcacagccccgcccacggctcagagcacgccaagatgactgccggagcc
ctgccgctatcctggatggagcagcggaaactcgccgggttccccgtggttaaacaagag
cagctgtctccacgtggcctctcctcctctcaggccgagaatctgtccacgcacggcatc
gctcacgagagcctcgctgcccgcgggcccatgccagctgtacagggaggaagcatcaca
aagggccttcctggcacgcgtgtccaccaagaatcctccataacataccgcggtggttct
atcactcagggcaccccggcagacgtgctgtataagggtaccattactcgtcttatcgct
gaggacagtcctagcagggacagatcccgagacgaaaaccaagccaagggacacgttctg
tacgagggcatcagcggacacatcctctcctacgaccgcgctccgaacccgaaggacgaa
ggcaggggagaagtgctgggactgaaacgcccatatgaggtcatggaagggggcggaatc
tctcgagtgctgccgttacgggactccctgtcctccgccgagggtttgatgggtagagca
atgcctcaggagagagagagtcctcgtcctcatcatatccgcggctctatctcgcagggt
atcccacgtcacgtagagtcgcaggaagagtattcgcgccgagagccgaagcagctgaag
cgcgagagctctccgtctccccgcggccccgacactaacaagggccgcccccacgacggc
gtagtgcccacggttaaagagggcgggcgctccatccacctcatcccgccggagggtgtg
ctgatgagcaaagcacctaaagagggctccatcacgcagggcacgcctctgaaaatggag
cctgcaggatcgtctaaacggcacgacgtgcgctccatcatatccagctccccgcggccg
tactcgggtctcccacctcatttagagaggggccactacgacgagccgggccctaagtct
cggccaagcgccgtggtcagcacctcgagctccctggtgctgggggcagaacaggcaggc
aaaagccaccacagcccggtgggctacgacgagcacaagagagcggggtacgcggcgtct
tcacacagaggatccccgctgaccagcagggacacgccgcagcggccacacgaaggctct
gcgaaggttcctcagcaggagcggaagtccactcctactcctcgggaaatgagagccacc
aagtctccgctgcctgtagtgggggatcacgctgcctcactggcctcctacgagaggctg
ctgcagggtctgggagccgatatgtaccgagggcagatcccgctaccgttcgaccctgct
gccctgccccggggcatccctatagatccagctgcttattacctgcctcgacacctggct
cccgcccctggttacccccacccctatccccattatctaatccggggcttcccggacacg
gcggccctcgagaacagacacacgctcttcaccgattacatcacctcacagcagatgcac
cagtggcctgcagcagctatgacacagagatcagacctactgagagcgcctcgagactcg
ccgctccctttatcctactcgccttcgacacgaggagcgtctgcgtcacaaatggatcgc
atcaactaccaccccggaacgccgaccactttccccagccgagtgtacaccacctcgccg
atctcaccagtcggaagctcgcacataggcaagctccagggcacgccgacggagcgcgag
agagagcgcgaaagagagcgcgagagagaccgggagagggagcgcgaccgagaaagagac
cgagagagggagcgggagagagaaagagaacgagagcgggatagagagagggagagggag
cgagagcgggagagagagcgggatcgagaccgagagagggagaagtctctcggccacggc
aacgtggagcacgcccccatctggagacctggagcagcagagcagaccgggagcagcagc
agctctagctcgcgtcctccttccctgccttacagccaccaggcgtccccgatgagccct
cggccccaggagagcctccagcacagacccaccgtcctgcacaacaccagctcgaaaacc
ctgcagagttcagagcacagcagcccgtctgtactgaggtccgtgccacagagttcttca
cgttacccaaactacagcgggcacctccagagagtcagcgaggcctacccggactcgagc
gcggtcaaagagctgagccgggagcctagcaagtcccagagtcgcggagttccgcccaag
tccgagtccgccaagatgtccagcccgagcgggggcggcgtttactcctcggccttcgcc
caggcacccggcggccacatggggctcgcggcaggccggggtcttcccgtaacggctacc
gagagcggcatcgtgaacagggacaagactcagaacaaggaccacgagctccgtgcgctc
gctcagcagaaggctctggagcacagtgtgttttttattccagaggagagactgtctccc
agccagcagcccccgtccccggctgttaaaagctcccagagagtggtgaccctcgcccag
cacatcagcgaggtgattaagaaagattacatgcgtcaatcacagcaggtccaggcagga
ggccagcctgtgttcggctaccacagctcacctgtgctggacctcactcgacccccgagc
gccccccagacgccctcggagccgagcgtcagcagccgctttacccccgagggctctgtc
ggcgacaggctgagagacaggtctcccccgcagagcaaagtgtccccagtgagtctgtcc
gctgagtgcatcgagccggtctctccaccagggggcgtgtccgagccggaatcccaggcg
gcggcgtgtcccagcgaacaagcagaacaagggatgggatctcgctccccctccagcagt
tcccagccgcctgcgttcttcagcaaactcaccgagaacaactccgccatcgtcaagagc
aagaaggagatgatcaagaagatggtcgtgggcaacgacaatgacttcaactcgggacag
cccgggacagagatcttcaacatgcctgcctccgctactggagggtcggtgagcatgcgt
agccagcctcctccagactccagcgggaacaccatcggcctggaggccatcatccgcaaa
gctctgatgggaaaatacgacgagcaggcggacgagcgctcggcctccaactccggaccc
cctgctgctgctgatccacgcactgaagagccttactcactgcctggtaaatcaaagagc
agcgggcgctccaacggccgcaagacaaagtctcccggtcccggactgtcgggaggagag
agaccgtcctccgtgtcctccgtccactctgagggagactgcaaccgccgcacgcctctc
accaaccgagtgtgggaggacagaccgtcgtccgcaggctccaccccgtacccctgtaac
cccttcacgatgatgcgtttacccggctcggtgatgtccgggccctccccgtcgcccacc
cagcccgctgcaggacctccacagcctcagagccgcacctgggaagaggaacccaaaccg
ctgctctgctctcagtacgagacgctgtccgacagcgagtga
DBGET
integrated database retrieval system
