KEGG   Ictalurus punctatus (channel catfish): 108265432
Entry
108265432         CDS       T04658                                 
Symbol
sort1b
Name
(RefSeq) sortilin 1b
  KO
K12388  sortilin
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04142  Lysosome
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    108265432 (sort1b)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 I-HmuI_NUMOD-like Insulin_TMD
Other DBs
NCBI-GeneID: 108265432
NCBI-ProteinID: XP_017323215
Ensembl: ENSIPUG00000004158
UniProt: A0A2D0R0B6
LinkDB
Position
5:complement(22528139..22549154)
AA seq 817 aa
MARQWHFILALFLFPAVYSLDFGGTRVSRTAHSLHMNAAGKIRSAVESSHQHTIKKRSAD
DGGDTCKGLQGYNDKLSNNTHISTFNDLSGSVALAWIGDGTGVVLALTTFQMPIFLLRFG
QSRLYRSEDYGKTFEDVTYLINNTFISTEFGIAIGPENSGKVILTGDVSGSSGSRIFLSS
DFGKSFSSLDLPFNPRMQIMYNPENSNILVAISLKNELWISGNFAATWKKIYEAVCVVKW
GEDNTLFFSTNLNGSCYDRGQLVLMKSVDHGETFKTIAEKIYSFGIGGRFLFASVMTGTG
MMRMIHVSTDQGEEWNIAQLPPVGHEQFYSILAANDEMVFMHVDEPGDSGFGTIYVSDDR
GMVYSKSLERHLYTATGGDNDFTNVTSLRGVYMASVLAEDDSVQTVVTFDQGGEWVPLKK
PENSQCDSTAKDTNKCSLHIHASYSISMKLNVPMLPLTEPNAVGLIIAHGSVGDAISVLT
PDVYVSDDGGYTWLRALKGPHHYAILDSGGLLVAVEHNPNVPISEIKFSTDEGQCWHVYN
FTEEKIYFTGLASEPGAHSMNVSIWGYRDSLLSQYWVSITIDFKELLTRDCDDNDYVQWL
AHSDDISDPTDGCMLGYKERFLRLKKDSVCWNGRDYVITKQPTPCTCTLDDFLCDFGYYR
KENSSECLEQLELKGHDLEFCIHGKKEHLQTNGYRKIPGDKCEGGQNIERKVTDMRKKCV
SDLLDPQLQTQEAEKPKHSAVIIVAVIAVLLIGCVAGALFVKKYVCGGRFLVHRYSVLQH
NAEANGIDGLDEPLDTNVVTPHPKVSFHEDSDEDLLE
NT seq 2454 nt   +upstreamnt  +downstreamnt
atggcacggcagtggcactttattttagcattatttttatttcccgcggtgtatagtttg
gatttcggcggaactagggtgtcgcgtaccgcgcactctcttcacatgaacgcagcgggt
aagatcaggtccgcggtggagtcttcacatcagcataccataaaaaagagaagcgcagat
gacggaggagacacctgtaagggtctacagggatacaacgacaaattatccaacaacact
cacattagcacatttaatgatctcagtggatcagtggctttggcctggataggagatgga
acaggggttgtgctggccttgactacatttcagatgcccattttcttgctacgatttggc
cagtccagactttaccggagcgaggactatggaaagacattcgaggacgtcacatacctt
attaacaacacgtttatcagcactgagtttgggatagccattggccctgagaattctggg
aaggtgatccttacaggagatgtgtctggaagcagtggatccaggatcttcctgtccagt
gactttgggaaaagctttagttcgttggacctgcctttcaaccctcgcatgcagattatg
tataaccccgaaaattccaatatccttgtggccatcagtctcaagaatgagctctggatt
tcagggaattttgctgcgacatggaagaaaatctacgaggctgtgtgtgtggtgaaatgg
ggagaagacaatacactcttcttttccaccaacctgaatggatcctgctatgacaggggg
cagctcgtcctgatgaaatcagtagaccatggagagacatttaagacaatagctgaaaag
atctactcctttgggattggtggccgtttcctcttcgcctcagtcatgactggaacagga
atgatgcggatgatccatgtgtccacagaccagggtgaggagtggaacatagctcagctt
cctcctgtaggtcatgagcagttctactctatactggcagccaatgacgaaatggtcttt
atgcatgtagatgaacccggggacagtggctttggtaccatctatgtgtcagacgacagg
ggcatggtgtactccaaatctctagagcgccacctctacacggctacaggaggcgacaac
gacttcacaaatgtcacatcactccgaggagtgtacatggccagtgtactagctgaagac
gactctgtgcagaccgtggtgacgttcgatcagggaggcgagtgggtgcccttgaagaaa
ccagagaacagccagtgtgattccacagctaaagatacaaataagtgtagtcttcatatt
catgcttcttacagcatctccatgaagctgaatgttccaatgctgcctctgactgagcct
aatgcggtgggactgataattgctcatggcagcgtcggcgatgccatctcagtgctgact
cccgatgtatacgtgtctgacgatggtggctacacatggctgcgcgctctcaagggcccc
catcactatgcgatcctggactcaggaggtttgctggtggccgtggagcacaatcccaat
gtgccaatttctgagatcaaattttccacagatgagggccagtgctggcatgtgtacaac
ttcaccgaggagaaaatatacttcactgggctcgcctcggagccgggggctcactccatg
aatgttagcatttggggctacagagattccctgctaagccagtactgggtctccatcacc
atcgacttcaaagagctgctcactcgtgactgtgatgataacgactatgtgcagtggctg
gcacattcagatgacatcagcgatcctactgatggctgcatgctgggttataaggagcgt
tttctgaggctcaagaaggactctgtgtgttggaacggacgtgattatgtcatcaccaag
cagcccacgccttgtacctgcacactagatgacttcctttgtgactttggatattaccgt
aaagagaacagctcagagtgtttggagcagcttgagctcaaaggccatgatctagagttc
tgcatccatggcaagaaggaacacctacagaccaacgggtatcggaagattccaggagat
aagtgtgagggtggccaaaacattgaacgaaaagtgactgatatgaggaaaaaatgtgtc
agcgatctactggatccacaactgcagactcaggaagcagagaaacccaagcactctgcc
gttattatcgtggcggtcatcgccgtcctgctgatcggttgtgtagctggggctcttttt
gtgaagaagtacgtctgtggtggaagattcctggtgcacaggtactcagtcctgcagcac
aacgccgaggctaatggcatagatggattagacgagcctttggatacgaacgtggtaacc
ccacacccaaaggtcagcttccacgaggactcggatgaggaccttctggaataa

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