Ictalurus punctatus (channel catfish): 108265437 Help Entry 108265437         CDS       T04658                                  Name (RefSeq) dmX-like protein 1 isoform X1   KO K24155   rabconnectin-3a Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu04142   Lysosome Brite KEGG Orthology (KO) [BR:ipu00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     108265437  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ipu04131]     108265437 Membrane trafficking [BR:ipu04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     108265437  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     108265437    RAVE complex     108265437 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st PEP5_VPS11_N Beta-prop_EML PP-binding Motif Other DBs NCBI-GeneID:  108265437 NCBI-ProteinID:  XP_017323238 Ensembl:  ENSIPUG00000025111 UniProt:  A0A2D0QY55 LinkDB All DBs Position 5:complement(19176468..19218031) Genome browser AA seq 2992 aa AA seqDB search MNLHQVLTGAVNPGDNCFSVGSINNVPFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV ACVDCSQQGQIAASYGNIVCIFDPVLMSPKEKMLMKLNYHWQKTGQFVLQSIAHNIAWSP TGSSLLTGSSCLQLWSSVNFCAGAEEEMGNDPLSSWRCIWQFKTASPVHLIKFSPDGEFF ATAGQDDCLVKVWYSTSKWQSDATKLFTPPELNSQGKPDFSFIYLAHPRSVTGFSWRKTS KYIPRGAVCSVLLTCCKDSVCRLWAETLLPSDCLLSGLRQNHSSSTNDAVKSSNIKKAHY NNKGQNRNLPEMSLAELNRGPVRGMAHARPLPQQQNKHYTHRATIAHTNALCHFHIAASI NPATDIPLLPSISSLNSSDDEEPGGPFNVHWLNNKELHLTLTMEVFLQQFRSNLEHQKPP QASQADDDCDEEGNTISPESKKGETSFKDGASIPLPKAAVNHQVEVLLNDWNRGADMLFS IHSMDGSLLVWHVDWLDEYQPGMFRQAQVSFASRIPVAFPTGDAISLSRSIVMYACNKNV DLAIQHGRQHPQGLQRSSSVLIGLGQGKQCPNGLRLSIFTPNVLMISKHSDGSLNQWSVS FAEGSAFSTVLSVSHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNAKVCNPIAYSGPGPV SSGQRNRSSLGAVSQDPNAIYSELILWRVDPVGPLSFSGGVSELARINSLHASAFSNVAW LPTLIPSNCLGVYGNSPSACFVASDGHSLRLYQAVIEAKKLLSELSNPEISKHVGEIFNI ISQQSTAKPGCIIELDAITDFQGKETQLLHVFEVDLILGNEKDDCSQELQHDENTSGLSL FWARFFLVVIEFTQSRRSVLHMWHLQLAAAPVTMGGTSTPADEDPVSSSFISNLQNDSPS PHKSPLSRSNLRSACRLTLAKERVFSQELTLPEGVEVISATPAAGHLSSSSLQPTGRAPY LLATSCTDGTVRFWSCRVVSDNDKTLDASPYIWEEWPLLVEEDLANSSAVNIPDKPVGIS CCHTSRVAVAYRESKPSRLAKKPIIHVSIFQCESTGGSQWILEQTLELDVSNSLTNNGSD KQLLVPSFQDGLVSTGDCLHSSGKTLVHLDWVSREDGSHILTVGLGSKLYMYGLLSGKPP ELGLSDNSREHCSSRLVLLRVVDLVSSVEGSLPIPVSLSWVRDGILVVGMDCEMHVYSQW QPAALAKSALTVGDANGGSMNSLSTALKQEGLSLQPSKKTLTRSMTSLAQKLSGKRTMYD LPAEMEDYGLFEAAHHLFPTLPQYHPVQLLELMALGKVRRAKAILSHLVKCIAGEIVTLK DTSVNQERRLRSLTISASGITSRDPKMFNKTESSDYTEIDSIPPLPLYALLAADDDTAHC AKVKTSSVSGDSGHGSSRADTYDELFQTSPVSLDDMDLLDGEEEDSKAKVIDLSKYGPTF FGPEHAQVLSSHLLHSSLPGLTRMEQMSLMALADTVASTSTDIRESQGKGGETLDECGLK FLLAVRLHTFLLTSLPPVHRAQLLCQGLSTCHYIWAFHSEAEEELLNMLPCMQKGEPTWP ELKAMGVGWWLRSTNKLRRCIEKVAKASFQKSNDPLDAALFYLAMKKKAVVWGLYRSHRN VKMTAFFSNNFNEDRWRKAALKNAFSLLGKQRFQHSAAFFLLAGSLRDAVEVCLEKMQDL QLALVISRLYESEFETSSTYKKVLQRYVLGHDHQIPMHQDPFLRSMAYWVLDDYSRALDT LLEEPTPNVDALHQGTTESSPCNPEVFNFYTYLKTHPLLLRRHFGSSEKAKVGLTGQGSM ADSISLVERRLFFTTANAHLQAGCPMLALEILSKMPKVIKKSKMLHNQDKPSPTFSGPDN PDCESGKDQASTLDWSQPTLNGFGSVSDTLSSPQEDHSHSDSVLSFDWSQLSMTLQDEPL ELKWDSDKEESEDEVAGLAMKRIKPESSAVLCDAPDSTSMSTDVTVDNSPFLFEDIFAAR FKFISCLKMLTAELRTLSTGYELDGGKLRHQLCHWLEREVVALQKCCGYNPYLQQVAGGI SVELGQVSGTSGDEQEYQGTAEQVREVQHRRRLWLQRNQPLLRIFLSYCGLHGSHGGGLA SVRMELILLLQESQQDDSFQVAVQQQASVPLLLACTASSKTVVANPIVHLTNLTHDILHT INALDSPPHPDVVNNEIYVMHSLAASLSACIYQCLCDGHSYSHINQFTGTVYESILLSHQ HPVRNLSMDEAVIPNTSPAKWPGVSTLVRLLGAAAEENQPGVGVLLCEILTAVFFSLFVH GLATHSSNELFHIVAHPLNNKLWVAVFGGGARLPVAGKSSPASAPAPMEDQEFKQKRFRL HSSRSSSREVPDNPVSPSPIVEQEASIFKERFVPPELSIWDYFIAKPFLPPSVSGVEYDS EESQGSDEEEEDDDAFGDEFDSNSPLQEHSNNNSYSWCLMRLAMVQLVLVNFKSFYPMAG YDLLDLPVCSPLCHSVMKTLQRWEQVLLKRLEIFGGPPSKYISTHPVDGTMASGLALLRH KALFEPSNTPFRSRRHSALSVKRLWQYLVKQEEVQETFIRNIFTKKQDQKESVEDCTDSM RYSGMEEPGVNQIEADLGYPAGKARIIHKESDIITAFAINKANRNCLVIASTHDIQELDV SSILATQILTWIDDDTDMEVKGDDFLVVQTRDDFTTLHGTTPYTHSSPGTPINMPWLGSH QTGRGAAMLIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRV MRIRFNYQGNKFGIVDADGALSLWQTNTSGNTPKPYLTLQCHNKTAHDFVFVGSSSLIAT AGLSTDNRNVCLWDTLVMPSNSLVHGFSCHESGATVLALAPKQQLLLSGGRKGWISVLDL TLKLQRQSFQAHDSAVKALAVDGTEGCFISGSAEGNIKVWNMFTQCLLHTFPNEHARQSI FRNLGTGVMQIETAPGNHIFSCGADGTMKMRVLPDHVSSYTNNVKNDVKFII NT seq 8979 nt NT seq  +upstreamnt  +downstreamnt atgaatctacaccaagtactcacaggggccgtcaaccccggagacaattgtttctctgta ggaagcataaacaacgtgccgttcacggcctatgcctctggctgtgacattgtaatcttg ggaagtgactttgagaggcttcagatcatcccaggtgccaagcatgggaacatccaagtt gcgtgtgtggactgttctcaacaaggacagattgctgcatcctatggaaacattgtttgc atattcgatcctgtgctgatgagcccaaaggaaaagatgctgatgaaactgaactaccac tggcaaaaaacaggccagtttgttttgcagtctatagcacacaacattgcctggagcccc acaggatctagccttttgactggatcaagctgcctacagttatggtccagtgtgaatttc tgtgctggtgctgaagaggagatgggtaatgaccctctgtcttcttggaggtgtatatgg cagttcaagactgcctcacccgtccacctaattaagtttagtccagacggagagtttttt gccacggcagggcaggatgactgtttggttaaagtgtggtacagcacgagcaagtggcag tctgatgccacaaagctgttcaccccacctgaactcaactctcaagggaagccggacttc tccttcatctatttagctcatccacgctcggtcactggcttctcctggaggaaaaccagc aagtacatacccagaggtgctgtgtgtagtgtgttactgacctgctgtaaagacagtgtg tgtcggctgtgggctgaaacactgctgcccagcgactgcctgctctctggactaagacaa aatcacagcagcagcaccaatgatgcagtcaaatccagtaacataaaaaaggctcattac aataacaaaggccaaaatcgaaacctgcccgagatgagcctggcagagttgaatcgggga ccagtcagaggtatggctcacgcaaggcctctccctcagcagcagaataagcattacacc cacagagccaccatcgctcacaccaatgcactgtgccactttcatattgctgctagcatc aacccagccacagatattcctctgctgccctccatatcatctctgaacagttcagatgat gaggagcctggtggacccttcaacgttcactggctcaacaacaaagagctgcacctgact ctcaccatggaggtgttcctccagcagtttaggagcaatttggagcatcagaagccacca caggctagccaagctgatgatgactgtgatgaggagggcaatactataagccctgaaagc aaaaaaggagagaccagcttcaaagatggagcctcaattcctctccctaaagctgcagtg aatcaccaggtggaggtgttactgaatgactggaacaggggagcagacatgctttttagc atccactccatggatggctcgctactcgtatggcacgttgattggctggatgaataccag cctggaatgttccgacaggcacaggtgtctttcgcatcccgaatccctgttgccttccct acaggtgatgctatctccctcagccgtagcatagtaatgtatgcctgtaacaaaaatgtg gatttggccatccagcatggtcgccagcatccccaagggctacaacgcagttcttcagtt ctaattggcctgggccaaggcaaacaatgcccgaatggtctgcgcctgagtatcttcacg cccaatgtgctgatgatctctaagcattctgatggctcgctcaaccagtggtcagtgagc tttgctgagggctcagccttctccactgtgctcagcgtctcacacaagtcgcgctactgt ggccatcgtttccacctcaatgacctggcctgccactctgtactgcccctgcttctaacc acctcacaccacaatgccaaggtgtgcaaccccattgcttactcagggcctgggccagtc tcttcgggccaaagaaaccggtcatccctgggcgctgtttcccaggacccaaatgcaatt tatagtgaactaatactatggagggtggatccagttggacccctttcattttcagggggt gtgtctgagctggccagaatcaactcgctccatgcatcagccttctccaatgtggcctgg cttccaactctcatcccaagcaactgccttggtgtttatggcaactcgccaagcgcctgt tttgtagcaagtgatggccattccttgagattgtatcaggcagttatcgaggctaagaaa ttgctgagtgaactctccaatcctgaaatatcaaaacatgtgggagaaatattcaacatc ataagtcagcaatctactgcaaagccaggctgcatcattgagcttgatgccatcacagac tttcaaggcaaggagacccagctgttacatgtgtttgaggtagacctgatcttgggaaat gagaaggatgattgctcacaggagctccagcatgatgagaatacctctggcctgtcacta ttctgggcacgcttctttctggtggtgattgagtttacccagagcaggagatcggtcctt catatgtggcatctgcagctggcagcagcacctgttaccatgggagggacctcaacccct gctgatgaagaccctgtgtcttcctcatttatcagcaacttgcaaaatgactccccatca ccccataaatcgccacttagcaggtccaacctgcgaagtgcctgtcgactcaccctggcc aaagagagagttttcagtcaggagcttacacttccagaaggggtagaggttatatctgcc acaccagcagcaggccacttaagctcgtcatctctgcagccaactggccgggccccatat cttcttgcaacgtcctgtacagacggaactgtgaggttctggagttgtagagtagtttct gataatgacaaaacacttgacgcatctccttacatctgggaggaatggcctttgctagtg gaagaagatctcgccaacagcagtgcggtgaacattccagacaaacctgtgggcattagc tgctgccatactagccgagtagctgtggcatacagggagtcaaagccttccagacttgcc aagaagcccataattcatgtgagcatattccagtgtgaatccacaggagggtcccagtgg atattggaacagacacttgaactggatgtttcaaatagtcttactaacaatggctcagat aaacagctgcttgtgcccagcttccaggatggtttagtgagtactggggattgtttacac agcagtggtaaaactttagttcatctggactgggtttctagagaggatggttctcatata ttgaccgtaggtcttggctccaaactgtacatgtatgggctgctctcaggaaaacctcca gagctggggctgtcggacaacagcagggagcattgctcttcacggcttgttttattgcgt gtagtggacctggtctcctctgtagagggctctttgccaatcccggtctccctgtcttgg gttagagacggcattttggttgtgggcatggactgtgaaatgcatgtctactctcagtgg cagcctgcagcattagccaaatcagcactgactgtaggtgatgcaaatggtggcagcatg aactcacttagcacagctctaaagcaagagggactaagtctccaaccttctaaaaagact cttaccaggtcgatgaccagtttggctcagaagcttagcggtaagaggacgatgtatgac cttcccgctgaaatggaagactatggcttatttgaggcagcacaccacttgtttcctacc ctcccccagtatcatccagtgcagcttttggaactaatggccctaggcaaggtacgacgg gccaaagctattttgtcccatctggttaagtgcatcgctggagagattgtgactctgaag gacaccagtgtcaaccaggaacgtcgtttacgatccctcactattagtgctagtggcatt acttccagggatcccaaaatgtttaacaaaactgaaagctcagactacacagagatcgac tccatcccaccgttgcccctgtatgctctgcttgctgcagatgatgatacagcccactgt gctaaagtcaaaacatccagtgttagtggggacagcggccatggttccagcagagcagac acctacgatgagcttttccagaccagccctgtgagcttggatgacatggatctcttagat ggtgaagaggaggactctaaagctaaggtcattgatctttcaaaatacggtcctactttc tttggcccagagcatgcccaggttttgtcaagccacctgcttcactctagcttacctggg ctcacacgaatggagcagatgtcacttatggccttggctgataccgttgcctcaaccagc acagacatcagggagagtcagggaaaaggtggagagacgctggatgaatgtggcttgaag ttcctgcttgctgttcgtttgcacacgttccttctgacatcattacctccagtgcatcgt gcacagctcctctgccaaggactgtctacatgtcactacatctgggcatttcattctgaa gctgaggaggaactgctcaacatgctgccttgcatgcagaaaggagaacccacttggcct gaactgaaagccatgggtgtaggctggtggctaaggagcaccaataagcttcgcagatgc attgaaaaggtagcaaaggcctctttccaaaagagcaatgatcctctggatgcagccctg ttttatttggctatgaagaagaaagctgtggtctggggactgtacaggtcccacaggaac gtgaagatgactgctttcttcagtaacaactttaatgaggaccgatggaggaaggctgca ttgaagaacgcattctctctgcttggcaagcagagatttcagcactctgcagccttcttt ctgttggcgggttccctcagagatgctgttgaggtttgcctggagaagatgcaggacctg cagttggccttggtgatcagcaggttatatgagtctgagtttgagacatcctccacttat aaaaaggttctacagaggtatgtgctgggtcacgaccaccagattccaatgcaccaggat ccgtttctacgtagtatggcatattgggttctagatgattacagccgagcattggatact ttgcttgaggaacccaccccaaatgttgatgctttacaccaagggaccacagaatcatct ccttgcaatccagaggttttcaacttctacacctacctcaaaacacatccactgctcctt cggcgccattttggatcctcagaaaaagctaaagtggggctgaccggacaaggcagcatg gctgactccattagtcttgtagaaaggagactgttcttcactactgctaatgctcactta caagctggctgccctatgttggctctagaaatcctctccaaaatgcccaaagttattaag aaatctaagatgctacacaaccaagacaagccctcaccaacatttagtggtcctgacaat ccagactgtgaaagtgggaaagaccaggcctctacccttgactggtcccaacctacgttg aatggctttggatctgtctcggataccttatcttctccacaagaagaccatagccactca gactctgttttgagctttgactggagtcagctttccatgactttgcaagatgagcctttg gagctgaagtgggatagtgacaaagaggaatctgaggatgaagtagctggcctagcgatg aagagaatcaaacctgagagctctgctgtcctttgcgatgctcctgactctacctccatg tctacggatgtcactgtagacaactctcccttcctttttgaggacatctttgctgctcgg ttcaagttcatttcctgcttgaagatgctgactgccgagctgcggactctctccacaggt tatgagctggatggtggaaagctgcgccaccaactgtgccactggctggagcgtgaggtg gtggcccttcagaagtgttgcgggtataacccctaccttcagcaggtggccgggggcatc tcggttgagcttggccaagtcagtggtacctctggagatgagcaagagtaccaagggact gcagagcaagtcagagaggtgcaacacaggcgcagactgtggctccagagaaaccagcct ctgctacgcatctttctaagctactgtggcctgcatggttcccatggaggagggttggct tcagtcaggatggagctcattctgcttctacaggaatcccaacaggatgacagttttcag gttgctgttcagcagcaagcatcagttcctctgctgctggcctgcactgcaagctccaaa actgtggtggccaatcctatagttcacctgaccaacctgacacatgacatactgcacacc attaatgccctggactctcctcctcaccctgacgtcgttaacaatgagatctacgtgatg cactcactggcagcttctctgtccgcctgcatctaccagtgcctttgtgacggacacagt tacagtcatatcaaccagttcacaggcactgtctacgagagcatcctgctttcccatcag caccctgtgcggaatctcagtatggatgaagctgtcattcctaacacctctccagcaaag tggccaggtgtcagtaccttggtccgtctcttgggtgcagcagcagaggagaaccagcca ggtgtgggtgtgcttctgtgtgagatcctcacagccgtcttcttcagcttgtttgtgcac ggcctggccacacactcgagcaacgagctcttccacattgtggctcatccgctcaacaac aagctgtgggtggctgtgtttggtgggggggctcgccttcctgtagctggaaaatccagc ccagcatcggctccagccccgatggaggaccaggaatttaagcagaagcgtttcaggctg cattcttccagaagcagctccagggaggtaccagacaatcctgtcagccccagcccgata gtagagcaggaagcatcaatttttaaagaacgctttgtgcctcctgagctcagcatctgg gactactttattgcaaagcctttcctgccaccttctgtaagcggagttgagtacgattca gaggaaagccaggggagtgacgaggaagaagaagatgatgatgcttttggagatgaattt gactccaattctccccttcaagaacattccaataacaactcgtatagctggtgtttgatg cgcttggccatggtgcagctggtgctggtcaacttcaaatccttctatcccatggctggc tatgacctcttggatctacccgtgtgctccccactgtgccactccgtgatgaaaacacta cagcgctgggaacaggtgttgctcaagaggttggagattttcggtgggcctccttccaaa tacatctccacacacccagttgatgggaccatggcatctggactagcactcctcagacac aaggccttattcgaaccctctaacacaccattcaggtcccgacgtcattctgcactttct gttaagagactgtggcagtacctggtgaaacaagaagaggtgcaggagacttttatccgc aacatctttacaaaaaagcaggatcagaaagagtcggttgaggactgcactgacagcatg aggtattcagggatggaggagcctggtgtcaatcagatcgaggcagatctaggttaccct gcaggcaaagcacgcatcatccacaaggaatctgacatcatcactgccttcgccattaac aaggccaaccgtaactgcttagtaattgcgtccacacatgacatccaggagttggacgtg tcctccatcctggccactcagatactgacatggattgatgatgacacagacatggaagtg aaaggagatgacttcttggtggtccagacccgggatgacttcaccactttgcatggcaca acaccctacactcacagcagccctggcactccgattaacatgccctggttgggcagccac cagactggtagaggagcagccatgctaatcaaacgcaacattaacaacgtcaggaggatg acgtctcacccgaccctcccatactacctaacaggagctcaggatggcagcgtgaggatg tttgaatggggccattcgcagcagatcatctgctttaggagccctggcaactccagggtt atgaggatcagatttaactaccaggggaataagtttggtattgttgatgcagatggagct cttagtctctggcagacaaatacatcagggaacacccctaaaccctacctgacattgcag tgccataacaaaacagctcatgattttgtgtttgtgggctcatcgtctctcattgccact gcaggcctttccactgacaacagaaatgtatgtttgtgggatacactggtcatgccatcc aacagcctggttcatggctttagctgccacgagtctggtgccactgtgctggctcttgct cctaaacagcagctgctgctcagtggagggaggaaaggctggatcagtgtgctggacctc acacttaagctccagcgccagagcttccaggcccatgactcggctgtcaaagcgctggct gtggatggcactgaaggctgcttcatcagcggctcggctgaaggcaacatcaaggtgtgg aacatgtttacgcagtgcctattgcacacgttcccgaacgaacacgcccggcagtccatc ttccgcaacctaggcacaggcgtcatgcagatcgagacggcaccaggcaatcacatcttt tcttgtggtgctgacggcaccatgaaaatgcgtgtgctgcccgaccacgtcagctcctac accaacaatgtgaagaatgacgtcaagttcatcatttag

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