Ictalurus punctatus (channel catfish): 108265460
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Entry
108265460 CDS
T04658
Symbol
xpr1a
Name
(RefSeq) xenotropic and polytropic retrovirus receptor 1a
KO
K24195
xenotropic and polytropic retrovirus receptor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108265460 (xpr1a)
Transporters [BR:
ipu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
108265460 (xpr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXS
SPX
Motif
Other DBs
NCBI-GeneID:
108265460
NCBI-ProteinID:
XP_017323287
Ensembl:
ENSIPUG00000016968
UniProt:
A0A2D0QY08
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Position
5:complement(33954188..34018064)
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AA seq
688 aa
AA seq
DB search
MKFAEHLSAHITPEWRKQYIQYEAFKEMLYAAQDQAPSIEVTDEDTVKRYYAKFEEKFFQ
TCEKELSKINTFYSEKLAEAQRRFSTLQNELQSSLDAQGDSIIGKSRKMGLALSNEERNK
HRNIKDLKLAFSEFYLSLILLQNYQNLNFTGFRKILKKHDKILETQRGADWRVSHVEVAP
FYTCKKITQLISETETLVTTELEGGDRQKAMKRLRVPPLGAAQPAPAWTTFRVGLYCGIF
IVLTVTFVLSGAFYFHDKNVWPMVRMYRGGFLLIQFLFLLGINTYGWRQAGVNHVLIFEL
NPRNNLSHQHLFEIAGFLGVLWCVSILLCLYADTIGLPMQASPLILYGLMFLLLINPFKT
AYYKSRFWLLKLLFRVFTAPFHRVEFADFWLADQLNSLAIVLMDLEYLVCFYSVELQWGD
MDGLLPNYSDDKKCNNYSYGLRAIIQCLPAWFRFVQCLRRYRDTKRAFPHLVNAGKYSTT
FFVVAFSALYSTHKDQGDTDAEAFLYLLIVFSTISSLYTLIWDLKMDWGLFDRNAGEHTF
LREEIVYPQKAYYYCAIVEDVILRFSWTLQIALTNMTNVSSADIVATALAPLEVFRRFVW
NFFRLENEHLNNCGEFRAVRDISVAPLNADDQTLLEQMMDHEDGVKHRQGKKPWRRSHSL
TLRRPLLHSQSKKDTKVLIEDTDDEAFS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgcggagcacctttcagctcacatcacaccggaatggaggaagcagtacatc
cagtacgaggccttcaaagagatgctgtatgcagcgcaggatcaggctccgtctatagaa
gtgacggatgaggacacagttaagaggtactacgctaaatttgaggagaagttctttcag
acatgcgagaaggaactgtccaagatcaacaccttctactcagagaagctagcggaggct
cagcggcgtttctccacgctccagaacgagctgcagtcctcgttggacgctcagggggac
agcatcataggaaagagcaggaagatgggtctggctctgagcaacgaggagaggaacaaa
caccgcaacatcaaagacctgaaactggccttcagcgagttctacctcagcctcatcctc
ctgcagaactaccagaacctgaacttcacagggttccgtaagatcctgaagaaacacgat
aagatcctggagacgcagcgcggagccgactggcgtgtctcacacgtggaggtcgcgccc
ttttacacgtgcaaaaagattacacagctcatctccgagactgagaccctggtaactacg
gagcttgagggcggagaccgacagaaagccatgaagagactgagagtcccaccactgggg
gcagctcagcccgctcctgcctggacgacgttcagagtcggactctactgcggaatcttc
atcgtcctcaccgtcaccttcgtcctcagcggtgcgttttatttccatgataagaacgtg
tggccgatggtgcggatgtaccgcggcggcttcctgctcatccagttcctcttcctgttg
ggcatcaacacgtacggctggagacaggctggagtcaatcacgtgctcatattcgaactg
aacccacgcaacaacctgtctcaccaacacctgttcgagatcgcaggcttcctgggtgtg
ttatggtgtgtgagtatcttgttgtgtctctacgccgacactatcgggctgcccatgcag
gcgagtcctctcatcctgtacggcctcatgttccttttactcatcaaccccttcaaaacg
gcctactacaaatcccgcttctggctcctcaaattgctgttccgcgtgttcacggcgccg
ttccaccgcgtggaattcgctgatttctggttggctgatcagctgaactctctggcgatc
gtgctgatggatctggagtatctggtgtgtttctacagtgtggagctgcagtggggggac
atggatggcctgctgcccaattattcagatgacaagaaatgcaacaattactcgtacgga
ctgcgtgccatcattcagtgtctacccgcctggttccgattcgtccagtgtctccgccgt
taccgtgacaccaagcgggcgtttcctcacctggtgaatgctgggaaatattctacaacc
ttctttgtggtggcgttctccgccctgtacagcacacacaaagaccagggtgacaccgac
gccgaggcgttcctctacctgctcatcgtcttctccaccatcagctccctctacacactg
atctgggatctgaagatggactggggtctgttcgaccgcaacgccggggagcacaccttc
ctccgggaggagatcgtctatccgcagaaggcgtattattactgtgccatcgtggaggac
gtgatcctgcgtttctcctggactcttcagatcgctctgaccaacatgacaaacgtctcc
tccgctgatatcgtggccaccgctctcgccccactggaggtgttcaggcgtttcgtgtgg
aacttcttccgtctggagaacgagcacctgaacaactgcggtgagttccgggcggtgcgg
gacatctccgtggctcctctgaacgccgacgatcagacactgctcgagcagatgatggac
cacgaggacggagtcaaacaccggcagggcaagaagccctggaggcggagccacagcctc
acactgcgacgcccgctgctgcactcccagtccaagaaggacactaaggtgctgattgag
gacacggatgacgaagccttcagctga
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