Ictalurus punctatus (channel catfish): 108265471
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Entry
108265471 CDS
T04658
Symbol
arid5a
Name
(RefSeq) AT-rich interactive domain-containing protein 5A isoform X2
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108265471 (arid5a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
ARID
108265471 (arid5a)
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GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
108265471
NCBI-ProteinID:
XP_017323309
Ensembl:
ENSIPUG00000003539
UniProt:
A0A2D0QYB8
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Position
5:complement(2133711..2154253)
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AA seq
563 aa
AA seq
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MVSEPRGDASGEEEHIDVCEEEQTEEKIPPKQFKREMPSSELTNGSAEESKPGQSESEER
AFVMNLYQFMKERGTPIERIPHLGFKQINLWKIYKAVEILGGYESVTTRRLWKNVYDELG
GSPGSTSAATCTRRHYERLVLPYERHRRGEEDKPLPPSKPRKQYKRSEEGKGKSESKKRR
RTDGDDPEEILRGSHPCERGVCSHSGAWPVSSEHPDGDQVSSQDMCLREKPLLQPLVPAL
VMSPLEKKKRLAQASLSVTPPAGLEDVTEPERPSVIHLSHSSTPSGRVSHTSDGSPLPLS
SPSSSRSPSPFSVSSEDCVAVPTQKTTAPEAEKQKQARFGASPESGVHVPFVRYPCPKDA
SPLLRPNHHNFLNFTSTHPDKTQRHPALRTPVPTSLSSACWVPSASSFSKVVPRSRDPWR
PVSLQPFYKPHAPNSKRPNSAETLVKKLPSPVRFPDRKDKSKMVVPKPTQQYLVHQTGLP
TLPYLLSGFNRPRADALEQMKALPHQPFFFPAHVNIPPSQTHPTHPLQGPFLGPYEATFR
PYPYSVPVWHPPAGYSVATLQPY
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggagcctcgtggagacgcgagcggtgaagaggaacacatcgatgtttgcgag
gaggaacagacagaggagaagattccaccaaagcagttcaaacgagaaatgccgagttca
gaactgaccaatgggagcgcggaggagtccaagcctggccaatcagagagcgaggagagg
gcgtttgtgatgaacctctaccagtttatgaaggaaagaggcacgcctatcgagagaata
cctcacctcggctttaaacagattaacctgtggaaaatctacaaggctgtggagatactt
ggaggctatgagtcggtgacgacccggcgcttgtggaagaacgtgtatgacgagctgggc
ggtagtccgggcagcaccagcgccgccacctgcactcgcagacattacgaaaggttagtt
ctaccctacgagaggcatcggaggggagaggaagacaagccacttcctccgtcgaaacct
cgtaaacagtacaagaggagcgaggagggcaagggcaaatccgagagcaagaagagacgg
aggacggacggagacgacccagaggaaattctgagaggcagtcatccctgtgagagagga
gtgtgttctcactccggagcgtggccggtttcctcagagcatccggacggtgaccaggtc
tcatctcaagacatgtgtctcagagagaagcctcttcttcagccgctagtccccgccctt
gtcatgtcccctctggagaagaagaagcgtctggcgcaggcgagcttgagcgtaacgcct
cctgctggcctggaggacgtcacagagcctgagagaccctctgtgattcatctgtcacat
tcgtccacaccttctggacgcgtaagccacacctctgacggctcacccctgcctctgtcc
tccccgtcctcctcacggagcccctcccctttctccgtttcctccgaggactgtgtcgcc
gttccgacccagaagacgacagctccggaagcagagaagcagaagcaagcacgttttgga
gcttcgcctgaatccggagtgcacgtacccttcgtccgttacccctgccccaaagacgcg
tcccctctgttacgcccaaatcaccacaacttcctgaacttcacgtctacacatccggac
aaaacccagagacacccagcgctccggacacccgtccccacgtctctaagctcggcctgc
tgggtgccgtctgcctcaagcttctccaaggtcgtccctcgctcccgtgatccctggagg
cccgtatccttacagccgttttacaaaccccacgctccgaattccaagaggccaaatagc
gccgagacattggtgaagaagctcccgtctcccgtacgcttcccagaccgaaaggacaaa
tccaagatggtggttcccaagccgacccaacagtaccttgtgcaccaaactggattgccc
accttgccatacctgctgtcaggtttcaaccggcccagagcggatgcgctggaacagatg
aaagctttaccccatcagcctttcttcttccctgctcatgtcaacattcctccatcccag
acacatcccacacatcccctgcagggtcccttcctcgggccgtatgaggccacgtttcgt
ccgtacccgtactcggtgccggtctggcatccgcctgccgggtacagcgtggcaacactg
cagccatattaa
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