Ictalurus punctatus (channel catfish): 108265527
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Entry
108265527 CDS
T04658
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03440
Homologous recombination
ipu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108265527
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108265527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
108265527
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108265527
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
108265527
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
108265527
BRCA1-C complex
108265527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
MU2_FHA
Motif
Other DBs
NCBI-GeneID:
108265527
NCBI-ProteinID:
XP_017323443
Ensembl:
ENSIPUG00000003176
UniProt:
A0A2D0QYG4
LinkDB
All DBs
Position
1:complement(8214126..8235495)
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AA seq
831 aa
AA seq
DB search
MWRLDSAESGTGPVSLLAGKEYVVGRKNCDILLSNDQSISRVHAHITVTEQAVTLKDSSK
YGTFVNEKRLETGTSKTVYAGDKLTFGVFQSKFRLELDSVVVCSSCVDNEGKATLSREVQ
ALGGRLVNAWSQECTHLVMPAVKVTIKTICALLCGRPIVKPEFFTELSKAVQQRENLPKA
ESFRPEIDELSLNKDKVDLGPRHERKTLFAGKTFVFLNTKQMKRLSQAIGFGGGRSQLLE
EGSLPASLLESRGTCVVDVTTGSSQPLIPPTTKKWAESVGLILHRNGLRFIAESEIGLAA
IYVNNQTYCNPCTSLDSVSVKMGPAILEATLSQNAAVDETVLHGASVNITAYVVNTEPSQ
NVGRKDVCSATAVGETPEKRAANLLRPTTSEKPPKATEPSAACSEPVSSLSRVQEEKKAK
SESQKSDECAKFTGYLSNGAKLKKSPQKQTSLTSFFKPSNKKRLREGSTESELSEAKLSR
QEDEGSKETKNSNPAPSLQKSATRLGSQTAHNQHGTTTRYGFSASLGLGSGLATESRSGG
ARPNLSLNLDSNYSSKKRKEPEQDPVASADLDVSLEELESIMSEDMDEPVQPTANKKQRL
DQGERSTAVAGDVCNATFSKQQRVEKKQSIVSTSRNSEQDRQSSATRDPERKSQIASNKT
QDVEQEQHSLTHGNDRCKTLDAKEEEVSFLLENKGHHGFTKHSEEVAVKDELMDSSSGSG
PGRDPEIPRKLLQVQFKSLTVSAPSKTRTEPLQSHNPSGKNFKCFHKVPVPGLQGLPKII
GGSDLVAHNRSKTSEFEEWLRDAAEQEKQQEREETLGDDLFRYNPRTTKRR
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtggagattagactctgcagaatcggggacaggcccagtctctttgcttgctggtaag
gagtatgtagtaggccgtaagaactgtgacatccttctgtccaacgaccagtcgatcagc
cgtgttcatgcccacatcactgtcactgagcaggctgtcacactgaaggacagttccaag
tatggcacttttgtcaatgaaaagcgactagagactgggacctccaagactgtctatgct
ggagacaagctcacattcggggtttttcagagcaagtttaggctggaactggattctgtg
gttgtgtgttcatcatgtgttgacaatgaagggaaagcaactctctccagggaagtccag
gctcttggtgggcgtctggttaacgcctggtctcaggagtgcactcacctagtcatgcct
gctgttaaagtcaccattaagacgatctgtgcgttactgtgcggtcggcccatagtgaaa
cctgaattcttcaccgagctctctaaggctgtccagcagagggaaaaccttccaaaagca
gagagcttcaggccggaaatagatgagctgagtctcaataaagacaaggtggaccttgga
ccccgtcacgagagaaagaccctgtttgcgggcaaaacctttgtcttcctcaacaccaaa
cagatgaaacgcttaagtcaggccatcggttttggaggtggaaggagccagcttttggag
gagggctctctgcctgcatcactcctagagtccagaggaacttgtgttgttgacgtgaca
acgggatcctcccaaccactcatacctcctaccaccaagaagtgggcagagtctgtcggc
ttgattctacatagaaatggtttacggttcattgctgagtcagagattggattggctgcc
atttatgtaaataatcagacatactgcaatccctgcacctctttggattcagtatctgtt
aaaatggggccagcaattcttgaagcaacgctttcccagaatgcagcagtggatgagact
gtacttcatggagcctccgtaaacatcactgcctatgtggttaatacagagccatctcag
aatgtcggcaggaaggacgtgtgcagtgccacagctgtgggtgagaccccagaaaaacgt
gctgcaaatctactgcgtccaacaacatctgagaagccaccaaaggccacagagccatca
gctgcctgctctgagcctgtgtcatcactcagcagagtacaagaagaaaagaaggcaaaa
tcagagagccagaaaagtgatgagtgtgctaaattcacaggctatttgagcaacggtgcc
aaactaaaaaaatcccctcagaaacaaacgtcactcacttccttcttcaaaccttccaac
aaaaagaggctgcgtgagggaagtaccgagtccgaactttcagaggccaaactctccaga
caagaggatgagggaagcaaggagacgaagaattctaatccagctccttcgctgcaaaaa
tctgccaccagattaggctcgcaaacagcccacaaccagcatggcacaaccacacgctac
ggtttcagtgccagtctcggtttgggttcgggtcttgctacagagtccagatcaggtgga
gcgcgaccaaatctgagcctgaatttagattcaaattacagttctaagaagaggaaagag
ccagaacaggaccctgtagcatctgctgatttagacgtttctctggaggagcttgagtcc
atcatgtctgaggacatggatgaacctgtgcagcccacagctaataaaaagcagcgtttg
gatcaaggggaaagaagcacagccgttgcaggggatgtttgtaacgctacattcagcaag
cagcagagagtagagaaaaagcaaagcatagtcagtacaagccggaactcggaacaggac
aggcagagttcagccactcgggacccggagagaaagtcacaaatcgcatccaataaaacg
caggatgtggaacaggaacagcacagtttaacacacggaaatgatagatgtaaaacttta
gatgccaaagaagaggaagtttcttttcttttggaaaataaaggccaccatggtttcacc
aaacacagtgaggaggttgcagtgaaggatgaactgatggactcaagctcaggctctggt
cctgggagagatcctgagattcctaggaagcttttgcaagtccaattcaaatccctgact
gtgagtgcccccagcaagactaggaccgagccactacagagccacaatcccagtggaaag
aatttcaaatgcttccataaggtcccggtccctgggcttcaggggttacccaaaatcatc
ggtggctctgatctggtggcgcataaccgcagcaaaacctcagaatttgaggagtggctg
agggatgcagctgagcaagagaaacagcaagaacgagaggagactctgggtgatgatctg
ttcaggtacaatccaaggactactaaaagaagatga
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