Ictalurus punctatus (channel catfish): 108265531
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Entry
108265531 CDS
T04658
Symbol
rab11fip1a
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108265531 (rab11fip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108265531 (rab11fip1a)
Membrane trafficking [BR:
ipu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
108265531 (rab11fip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
108265531
NCBI-ProteinID:
XP_017323450
Ensembl:
ENSIPUG00000010070
UniProt:
A0A2D0R0Z1
LinkDB
All DBs
Position
5:5869495..5889396
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AA seq
1248 aa
AA seq
DB search
MSLAEQSQQWYPTSVQVTVLQARNLRVKGKNGTNDAYAIMQVAKDKFSTAVVEKCVEPVW
KEEATFDLPLFHRGNAERCTLYIVVMHRALVGMDKLLGQAVINLLDLQDDKARKKTDWYK
LLDKNSKADKERGEVLLDIQFMRNNMTASMFDLSMPDKPRSRISKLKDKVRGKKKDGHAD
SASAIVPATVGQVLTDSEGEEEGSTDSPKLKKSSKFKSLFGSKTNLHRGVSQSMSTLGTL
PEKNSSLTSSRSSGLNEESAEGKNKFKFLGHKRNGSTDSKISLGPFTLLNRSKQSTPESN
LCINGSHVYAEDQESKPDSGSSLSLSGSAKGSVEDLRKYHERNASAGSTDSFKGLSIPSY
KPDLAEREFQVQHRPQEDEEKKHKKAEGRLQELLDEQERKKQQEQEERRRKLEEDERKMQ
QERERKRQEDEEQQRKRREEEARKAEEQKRQEESRVTDRLTSLFGLGRKKEEQIAPAVES
PKQPDVPASINPFEEIPLGSDNPDPQEKSADSQKEVRTAFTPIPPTSGFPARTAKVSAVK
PRLTLSQKTETDNTDSLESPVPSDIQNSVPTSIFPPEASSSSDPFESFDMFSNLHSSMAP
PKPQRTFSDSSTGSTENTNSLSEKKHRAPQSPGYPGDPGDPFKNEKYHPKNGVQVNSPTS
EKIERPSLPLPDYESLFPKKRHGVMTNTRWEHVIAEVNQRKMTFQDGKKEMSVDGPGEPF
SNKSSILQERNTSILDQHPRDHQVVSSASTKAMEPKPPLIPPKPANLATSKQHLEVNSEQ
GRTHERLYSVHGEKTKTGLERNPGALVQSPEDAQMNVKGTLSPIPDLTLDHISMPKKEKP
TPTARSAKKSTSPADQSCDADTTGLPLAKPRQAAPSKEPVRQVQPERSMLAFTSSASSQA
ERKNTGSVTTKSLWEDVAFEEGKLIPVNNTDKTVNVAKEQPFTNVTSALEKQMTEVDPFP
SAELISQDPWALPQQTMDQDDFFTGGLKKGKKLEDPRLSSDDFDNIFGSVASTNEMDPFF
VPKDDANMFFESVGSKDETDMKKSHNSSPSPQKVYSQKKKLAPKPPEKPVIKDPFLQEAD
DVEITVSSLAGPKGGETTTATSLSSAFPELLSGSASGGKSTLCAWISPSEVQSGTSHSSG
SGGVLTSRRPHPVKPLSPYESQSPGSISMGKDLKIQTIREVAEKSKPVESGPYTQLTQEE
LITLVVKQQTELSKKDEKIVELEEYIDNLLVRIIDEKPSILLAMNSKV
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgtctctagccgagcagagccagcagtggtacccgaccagcgtccaggtgacggtcctt
caggcgcgcaacctgcgggtcaaaggcaaaaatggcacgaatgacgcgtacgcgatcatg
caggtggccaaggacaagttttccaccgcggtggtggagaagtgcgtggagcctgtatgg
aaggaagaagccaccttcgatctcccgctcttccaccgcgggaacgccgagcgctgcacc
ctgtacatcgtagtcatgcaccgcgccctggtgggcatggacaagctgctgggccaggcc
gtcatcaacctgctggacctacaagacgacaaggcccgcaaaaagaccgattggtacaag
ctgctggataagaacagtaaggcagacaaggagagaggtgaggttctcctggacatccag
ttcatgcggaacaacatgacagccagcatgttcgatctctccatgccagacaagcctcgg
tcccgtatctccaagctcaaagacaaggttcggggcaagaagaaggacggacacgctgac
tccgcttccgctattgttcctgccacagttggtcaggtcctgacggacagcgagggggaa
gaagagggaagcacagactctcccaaactgaagaagtcctctaaatttaagtctcttttt
ggatcgaagacaaatctccacagaggcgtgtcccaatccatgtccaccctcggtaccctg
cctgagaagaacagctcgctgaccagcagccgatcctcaggcctgaatgaagaatctgct
gaaggtaaaaacaagttcaagtttctgggccacaagagaaacggtagcactgacagcaaa
atatccctaggccctttcaccctgctgaatcgctccaaacagagcactcctgagagcaac
ctgtgcatcaatggcagtcacgtgtacgctgaggaccaggagtccaagccggattctggt
tcctccctcagcctgagcggctctgcgaagggttccgtcgaagacctgcggaaataccac
gaacgaaacgcgtctgctggctccactgactccttcaaaggcctcagtattccgagttac
aagcctgacttggcggagagggaattccaagtccaacatcgcccccaagaggacgaagag
aagaagcacaagaaggcagaaggacgcctgcaggagcttttggatgagcaggagcggaag
aagcagcaagagcaagaggagagaaggagaaaactggaggaagacgaaagaaagatgcag
caggaacgagagaggaagcggcaggaggatgaggagcagcaacgaaaaaggcgtgaagag
gaggcaaggaaagcagaggagcagaaacgccaagaggagtccagagtgactgacaggctc
acttctcttttcggcttagggcggaagaaagaagagcaaatagcccctgctgtggagagt
cctaaacaaccggacgtaccagcttcaataaacccatttgaggagattccgctcggctca
gacaacccagatccacaggagaaatcagcagactcgcagaaagaggtgcgaactgcattt
actccaataccacccaccagcggctttccagctcgtacagccaaggtttcagcagtcaag
cccagattgactctcagtcagaagactgaaacagataatactgattcccttgaatcccct
gtcccctcagacatccagaactctgttcctacttctatttttccccctgaagcatcatct
tctagtgatccttttgagtctttcgatatgttttctaacctccactcttctatggcacct
cctaaacctcagagaaccttttcagactcgtcaacaggcagcacggaaaacaccaatagc
ttgtctgagaaaaagcacagagccccacagtcgcctggctatcctggggatcctggggat
ccgttcaaaaatgaaaagtaccatccaaaaaatggagtacaggttaattcgccaacctcc
gagaagattgaacgaccttcacttcctcttcctgactatgaatctctttttcccaagaag
agacatggtgtgatgaccaacacccgttgggaacacgtcattgctgaagtgaaccagaga
aagatgacttttcaagacggtaaaaaagaaatgagcgtagatggtcctggtgagcccttc
tcaaataaatcttcaattttacaggaaaggaatacatcaatcctcgaccagcatcccaga
gatcatcaggtggtgtcctctgcctccacaaaggcaatggagcctaagccgcctctaatt
ccaccgaaaccagctaatttggcaacatcaaagcagcaccttgaggttaattctgagcaa
ggccgtacccacgaacgattatattctgtacatggtgaaaagaccaaaacaggtttggaa
agaaacccaggagcattggtccagagtccagaagacgcacagatgaatgtaaagggaact
ttaagccccattcctgacctcacacttgatcacatctccatgccaaaaaaggaaaaacca
acaccaacagccaggagtgcaaaaaagtcaacttcaccagcagatcaaagctgtgatgct
gatactacagggttgcctctagccaaacctaggcaagcagctccaagtaaagaacctgtc
cgacaggttcaacccgagcgaagtatgctcgcttttacatcctcagcaagttctcaagca
gaaagaaaaaacacaggttctgtgacgactaagagtttgtgggaggatgtagcctttgaa
gaaggaaagcttatccctgtaaataataccgataaaactgttaatgtggcaaaagaacaa
ccctttacaaatgtcacaagtgctctcgagaaacaaatgactgaagttgaccctttcccg
agtgccgagttaatctctcaagatccgtgggcgttaccacaacagaccatggatcaagat
gactttttcactggtggtctgaagaaaggaaaaaagcttgaagatccgagattatcctcc
gatgactttgataacatctttggatctgttgcatctacaaatgaaatggatccattcttt
gtacccaaagatgacgcaaatatgttttttgaatctgtgggctctaaagatgaaacggat
atgaaaaaatcgcataactcgagcccttccccccagaaggtatactctcaaaagaaaaag
ctagcacctaagccccctgagaagcctgtaataaaagatccattccttcaagaggctgat
gatgttgaaataactgtttctagtcttgctggcccaaagggtggtgaaactacaacagcc
acctcattgtcttcagcttttccagaactcctgtctggaagtgcgtctgggggcaaaagc
acactctgtgcctggatttcaccctctgaggttcagtcaggcacatcacatagcagtgga
agtggtggggtattgacctctcgcagaccacacccagtgaaacctttgagtccctatgaa
agtcagtctcctggtagtatttccatgggaaaagatttgaagattcaaaccatccgcgaa
gtggctgaaaaatcaaagcccgtagagagcggaccatacacccagctcactcaggaagag
ttgatcaccctggtggtgaagcagcaaactgagctatccaaaaaggatgagaagattgtt
gagctggaagaatacatcgataatctgctggtccgcatcatcgacgaaaaacccagcatc
ctgttggcaatgaactccaaggtttag
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