Ictalurus punctatus (channel catfish): 108265554
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Entry
108265554 CDS
T04658
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2 isoform X1
KO
K20994
Notch 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108265554 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
EGF_Teneurin
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
108265554
NCBI-ProteinID:
XP_017323509
Ensembl:
ENSIPUG00000015103
UniProt:
A0A2D0QYW8
LinkDB
All DBs
Position
5:complement(32783791..32846491)
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AA seq
2502 aa
AA seq
DB search
MGRFPGVSSGRVIFFIVSWIHLSHTLQCVDHVNPCVNNASCVKYENGTEYCRCPPGYLGE
YCHHKDLCQPDYCVNGGSCRMASSGPPSGPECVCPLGFSGSRCEVQNDSPCYPKNPCSNG
GICSLLPNDRYTCQCSPGWTGERCDLVNSCVSSPCSNGGTCASLRDGTFSCRCPPGYSGP
RCLKDVDECTREPSPCRNAGECVNVPGSYRCNCAAGFTGSNCEKLYMPCSPSPCMNGGTC
RQTSETSYWCHCLPGFNGTNCEVNIDDCPDHQCQNGGTCMDGVNTYNCQCPPEWTGQFCT
DDVDECRLQPNTCQNGGTCSNTPGGYTCVCVNGWSGLDCSENIDDCAAGPCSAGSTCLDR
VASFFCSCPFGKTGLLCHIDDACISNPCRAGSQCDTNPVNGKFNCNCPSGYIGNTCNDDI
NECIIPRANPCEHGGTCENTEGSFICNCARGYMGPRCEQDVNECGSNPCQNDATCLDQIG
DYTCICMPGFEGVHCEIEVDECASSPCLNSGKCRDQVSGFVCECLQGFTGEMCQIDTDEC
ASTPCHNGAKCIDQPNSYECECAEGFTGPLCSENVDDCNPKPCHYGTCKDGIAMFTCECF
PGYMGQICSEQINECQSDPCQNGGRCVDRVNEYQCQCQPGTSGMNCENNYDDCVSNPCQH
GVCEDGINKYKCVCAPGYTGERCNVEIDECSSNPCLSGGTCVDKANGFECQCPAGTHGLL
CHSGADYCAPQPCRKGKCEEVQNGYRCVCLPGYEGQNCDQEKNECEPNPCQHGTCLDSVN
SYTCRCQLGYTGVNCETNINECQSNPCENKGTCVDGINSYTCRCPLPYTGSHCEEELVPC
AAQPCQRGGTCQPSLDYTSYTCKCPSGWQGARCTEDVDECKKNPCLNGAHCLNNQGSYEC
RCQPGYSGVNCQTNIDDCSSNPCINGGSCVDKVGRFSCECRPGFYGERCEKEVNECESSP
CRHGGTCTDFVNSYTCQCQPGYDGINCERNIPECTETSCLNNGTCVDGINQFICRCRAGF
TGTFCQYEINECESQPCLNGGTCTDGLGTFHCTCPMEYTGRLCRSMADLCRNIQCKNGGE
CVQQETAWRCRCPQDWSGLYCDIPNISCQNAANKKGVAVEQLCLNAGVCVNKDNTHYCSC
QVGWTGSYCEIGIDECLSSPCRNGGVCVDYQGGYDCQCKPGYQGVNCEYDVNECQSNPCR
HGGTCINLVNHFYCSCPPGTKGQQCEEDVDECAVESGPPCLNGGRCVDGIGHYECVCPPG
FTGEHCEGDINECRPSPCHKSGSLDCVQLANDFQCRCRLGYTGHLCESMVDLCQSKPCHN
GGQCSMNMSSVHGYSCTCLPGFTGSNCGEHEGYTCANLRCQNGGHCQTSPSGRLQCVCPS
GFSGPQCENENPSCSCQNGGVCMKDLHKPYSFFCRCPDGYSGEHCQIRVGSMSCPYLECE
VRRGDKVCDPQCKNAECDWDGGDCTLRRLRPWDNCTASVSCWKFFHNGRCDPECDNAGCL
FDSFECQKSSPATPGACKYDRYCRDHYQNGHCNEGCNTEACGWDGLDCSTDKPPQLAEGT
LVIVVLLQPTELLGDIKGFLRSLGLLLHTNLRLKFNDQQEPMVYPYYGNGHDDLHAGASN
GKRLGKREVPTEVIGSMVYLEIDNRQCTQASSECFSNTDLAASYIAAEALETKLHYPLFS
VDSVPPPKGPDQSLLYLVAVAAAIILLILILGVLVAKRKRKHGVLWLPDGFLAKKDSKRR
EPVGQDDFGMKSLQKSQMDGSSGHHWPEEELRPKKPRLEDKPLLGVDTGVDRREWTLQHR
KAADITLTPPQADMDMDCLDVNVKGPDGFTPLMLASLRGGSSPECVSVLAEEEEESGADE
PGTNIISDLISQGATLNAQTERTGETALHLAARYARADAAKRLLDAGADPNAHDNMGRTP
LHAAIAADAQGVFQILIRNRATELDSRMNDGTTPLILAARLAVEGMVEELVHCHADANAV
DDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFEAAQVLLDHY
SNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHSGSNHVGNGGGGHPSMVCTGN
GVIGMRQGQQNKKNRRGGGAAKLTGPNGAGGGVKDLKEMKSKRRKKPAGGEATGLAASSG
NNIATVTANTNSTKGVTTAGTGALSESSVTMSPVDSLESPHSYTTDAAGAANMAKSPPLM
TSPSTRPFLPPVSHMLGQQQSWVGVAKHGYASPHIFSHMISHQMAPAHSGLPQHHHGSGI
LGPVNVSVSREQLPSIVTFQMMASRNQALLKSNQQGAMQASQTQTQGLNHMHCGQEMMYP
MQEPGLQHGIPHLHGHAHNIAEPQVRQLTPYHQQMQSPVDKYPTPPSHRSYASGAGSEAV
ATPGQGSEVTTPGHGALPSSEHPYLTPSPESPDPWSSSSSPHSHSDWSDVTTSPHGALHT
HAVHPHTHAHTHVPEQAPLLQPQPSQPAQPAQQQQACSSVYA
NT seq
7509 nt
NT seq
+upstream
nt +downstream
nt
atgggccgatttcccggtgtctcttcgggcagagtcatcttcttcatcgtttcctggatt
catctttcacatacgctgcagtgcgtggatcacgtgaatccgtgcgtgaacaatgccagc
tgtgtcaagtacgagaacggaacggaatactgcaggtgtcctccgggttacctgggtgag
tactgccaccataaggacctgtgccagccggattactgtgtgaatggagggagctgtagg
atggcgagcagcgggccgcccagtggccccgagtgtgtgtgtccactcgggttctccggc
tcgcgctgcgaagtgcagaacgactctccctgttaccccaagaacccctgcagcaacggg
ggcatctgctccctcctgcccaatgaccgatacacctgccagtgttcacctggatggaca
ggtgagcgatgtgacctagtgaacagctgcgtctcctctccgtgctccaatggcggaacg
tgtgcgtctcttcgtgacggaacgttctcctgcaggtgtcctcccgggtacagcgggccc
cgctgcctgaaggacgtggacgagtgcacgcgcgagccgtccccgtgccgtaacgccggc
gagtgcgtgaacgtccccggctcgtaccgctgcaactgcgccgccgggttcacgggctcc
aactgcgagaagttgtacatgccgtgttctccgtcaccctgcatgaacggcggaacctgc
agacagacatccgagaccagctactggtgccactgtcttccaggttttaacggcacgaac
tgcgaggtgaatatcgacgactgtccggatcatcagtgtcagaacggaggaacctgcatg
gacggagtgaacacctacaactgccagtgtccgcccgagtggaccggtcagttttgcacg
gacgacgtggacgagtgtcgcctgcagcccaacacctgtcagaacggtggcacgtgcagc
aacacgcccggcggctacacctgcgtctgcgtgaacggctggagcggcctggactgctcg
gagaacatcgacgactgcgctgccggaccctgctcagccgggtctacctgcctcgaccgc
gtcgcgtccttcttctgcagctgccccttcggcaagaccggtttgctgtgtcacattgat
gatgcgtgcattagtaacccgtgcagggcgggctctcagtgcgacaccaatccggtgaac
ggcaaattcaactgcaactgtccgtcgggatacatcggcaacacctgcaacgacgacatc
aacgagtgcatcatccctcgggcgaacccgtgtgagcacggcggcacgtgcgagaacacg
gagggctccttcatctgtaactgcgcacgcggctacatgggacctcgctgcgagcaggat
gtgaacgagtgcggctcgaacccctgccagaacgacgccacttgtctggatcagatcggc
gattacacctgcatctgcatgccaggttttgaaggagtccactgtgagattgaagtggac
gagtgcgccagttcaccctgcctcaacagcggaaagtgtcgggatcaggtcagcggcttc
gtctgcgagtgtcttcagggcttcacgggagagatgtgccagatagacactgatgagtgt
gcgagcacgccgtgccacaacggagccaagtgcatcgaccagcctaacagctacgagtgc
gagtgtgcagaaggtttcactggtcccctgtgttcggagaacgtggacgactgtaacccg
aagccctgccactacggcacgtgtaaggatggcatcgccatgttcacgtgcgagtgtttt
ccggggtacatggggcagatctgcagcgagcagataaacgagtgtcagagcgacccgtgc
cagaacggagggcgctgtgtcgaccgcgtcaacgagtaccagtgccagtgccagcccgga
acctctggtatgaactgtgagaacaactacgacgactgcgtcagtaacccgtgtcagcac
ggtgtgtgtgaagatggaattaacaagtacaagtgtgtgtgcgcgcctggatacacaggc
gagcggtgtaacgtggagatagacgagtgcagctcgaacccgtgtctcagtggagggacg
tgtgtggataaagcgaacgggttcgagtgtcagtgtccagcggggactcacggcctgctc
tgccactccggagcggactactgcgccccgcaaccctgccgcaagggaaagtgcgaggag
gtgcagaacgggtaccgctgtgtgtgcttacctggctacgagggtcagaactgcgatcag
gagaaaaacgaatgcgagccgaacccctgtcagcacggaacctgtctggactctgtcaac
agctacacctgcaggtgccagcttggctacactggtgtgaattgtgagacaaacattaac
gagtgtcagtcgaacccctgtgagaacaagggcacctgcgtcgatggaattaacagctac
acctgccgctgccctctgccttacacagggagtcactgcgaggaagagttagtgccgtgt
gcagctcagccgtgtcagagaggaggcacgtgtcagccgtcgctggattacacctcctac
acgtgcaagtgtcccagtggctggcaaggagcccggtgtacggaggacgtggacgaatgc
aagaagaacccgtgtctgaacggagctcactgtctgaacaatcaaggcagctacgagtgc
agatgccagcccgggtacagcggagtgaactgtcagactaacatcgacgactgcagctcc
aacccctgtatcaacggaggctcgtgcgtcgacaaagtgggccggttctcgtgcgagtgc
aggccgggtttctacggcgagcgatgcgagaaggaggtgaacgaatgcgagagctccccc
tgcaggcacggaggaacctgcactgactttgtcaacagctacacgtgccagtgtcagccc
ggctacgacggcatcaactgcgaacgcaacatccccgaatgcaccgagacctcatgtctg
aataacggcacgtgcgtggacggtataaaccagttcatctgccgatgtcgtgcagggttc
accggcacgttctgccagtacgagattaacgagtgtgaatcgcagccgtgcttaaatgga
ggcacctgcacggatggcctgggaaccttccactgcacctgtcctatggaatacaccggc
cgactctgccggtcgatggcggatctgtgcagaaacatccagtgtaagaacggcggagag
tgtgtgcagcaggagacggcgtggcgatgtcggtgtcctcaggactggagcggcctctac
tgtgacatccccaacatctcgtgccaaaacgccgccaacaagaaaggtgtagcagtggag
cagctgtgtctgaacgccggagtgtgtgtaaacaaggataatacacactactgctcgtgt
caggtgggctggactggcagctactgtgagatagggatcgacgagtgtctgtccagtccc
tgcaggaacggaggggtgtgtgtggactaccagggaggatacgactgccagtgtaagccc
gggtatcagggagtgaactgcgagtacgatgtgaatgagtgtcagtcgaacccgtgtcgt
catggaggcacctgcatcaacctggtgaaccacttctactgctcctgcccacctggaacc
aaaggccagcagtgcgaggaggacgtcgacgagtgtgcagtggagtccggcccgccctgt
ttgaacggcggtcgctgcgtggacggtatcggtcactacgagtgcgtgtgtcctcccggt
ttcaccggcgagcactgtgaaggagacatcaacgagtgccgcccgtctccgtgccacaag
tccggcagcctcgactgcgtccagctagccaacgactttcagtgccgctgtcgtcttggt
tacaccggtcatctttgtgagtcgatggttgatctttgtcagtcgaaaccctgccacaac
ggaggccagtgctccatgaacatgagctcagtccatggatacagctgcacctgtctacct
ggctttacgggctccaactgtggcgagcacgagggctacacctgcgccaacctgcgctgt
cagaacggcggacactgccagacgtccccctccggccgtctgcagtgcgtctgcccgtcc
ggcttctcgggcccacagtgcgagaacgaaaatccgtcctgttcgtgccaaaacggaggc
gtgtgcatgaaagacttgcacaaaccttactcgttcttttgccgctgcccggacggctac
agcggagagcactgccagatcagagtcggttccatgtcctgcccttatttggagtgtgag
gttcgccgcggcgacaaggtgtgcgacccacagtgtaagaacgcggagtgcgattgggac
ggaggagactgcacgctgcgccggctccgcccatgggacaactgcaccgcctctgtgtcg
tgctggaagttctttcataacggccgctgcgaccccgagtgtgacaacgccggctgcctc
tttgacagcttcgagtgccagaagagctcgccggccacgcctggcgcgtgcaagtatgac
cggtactgccgcgaccactaccagaacggccactgtaacgagggctgtaacaccgaggcg
tgtggctgggacgggttagactgctccaccgacaagccgcctcagctggcggagggcacg
ctggtcatcgtggtgctgctgcagcccacggagctgctgggagatataaagggcttcctt
cgctcactgggcttgctgcttcacaccaacctgcgcctcaagttcaacgatcagcaggag
cccatggtctatccgtattacggcaacggacacgacgacttgcacgccggcgcatccaac
gggaaacgactcggcaagagggaggtgccgacggaggttattgggtcgatggtgtatctg
gagatcgataaccgtcagtgcactcaggcatccagcgaatgtttctccaacaccgacctg
gctgcctcgtacatcgcggccgaagccctcgaaaccaagctgcattatccccttttctct
gtggacagcgtcccaccccctaaagggcctgaccaatctctcctctacctggtcgccgtg
gcagccgccatcatcctgcttatcctgattttgggcgttttggtcgccaaacgtaaacgc
aagcacggcgtcctctggctgccggacggcttcctggccaagaaggacagcaagcggaga
gagcctgttggtcaggacgacttcggcatgaagagcctgcagaagtcacagatggacgga
agttctggtcatcactggcccgaggaggaacttcggcccaagaagccaaggttggaagat
aagccgttgttgggagtggacacaggagtggatcgtcgtgagtggaccctgcagcaccgt
aaagctgccgatatcaccctcaccccacctcaggccgatatggacatggactgtctggac
gtcaacgtgaaaggacccgatggtttcactcctctgatgctggcgtctctgcggggcggc
agcagtcccgagtgcgtcagcgtcttagccgaggaggaggaggagagcggtgccgacgag
ccaggcacgaacatcatcagcgacctgatctcccagggtgctacgctcaacgcacagacg
gagcgcacgggcgagacggctctccacctggccgcccgctacgcccgcgccgacgccgcc
aagaggctgctggacgccggtgccgaccccaacgctcacgacaacatgggccgcacgccg
ctgcacgcggccatcgccgccgacgcacagggagtcttccagatcctgatacgtaatcgc
gccacggagctggattccaggatgaacgatggaacgactcctttaatcctggcagccaga
ttggccgtggagggcatggtggaggagctggtgcactgccacgccgatgcaaatgctgtg
gacgaccacggtaaatcggctctgcattgggctgctgccgtgaacaatgtggaggccacg
ctggtgctgctgaagaacggcgccaatcgagacatgcaggacaacaaggaggagacgccg
ttgttcttggcggcgcgcgaaggcagtttcgaggcggctcaggtcctcctggatcactac
tccaaccgtgacatcactgatcacctggaccggttgccacgcgatacggctcaggaacgc
atgcaccacgacatcgttcggctgctcgaccagtacaatctcgtgcacagcccgcattct
ggatcgaaccatgtaggaaacggtgggggtggacacccctccatggtctgcaccggtaac
ggggtcattggcatgcgacagggacaacaaaacaagaagaaccggcgtggcggcggagcc
gccaaactcaccggccctaatggtgctgggggcggagtcaaagatctgaaggagatgaag
tcaaaacggaggaagaaaccagccggaggagaagcgacaggattggctgcgtccagcggt
aacaacatagcaaccgtgaccgctaacactaacagcaccaagggcgtgacaaccgccggc
acgggtgctctttcagaaagctcggtcacgatgtcgccggtggattcgctagaatcgccg
cattcgtacacgacggatgccgcaggagctgccaacatggccaaatcacctccgctgatg
accagcccctcgacccgccccttcctgcctcccgtcagccacatgctagggcagcagcag
agctgggttggcgtggctaagcacggctacgcctccccccacattttcagccacatgatt
tcccaccagatggcgccggcacactcgggcctgccgcagcaccatcatggctcggggatc
ctggggcccgtgaacgtctccgtgagccgagagcagcttccgtcgattgtcaccttccag
atgatggcctccagaaaccaggcacttctcaaatcaaaccagcagggggccatgcaagcg
agtcaaacccagacccagggccttaaccacatgcactgcggccaggagatgatgtatccc
atgcaggagcccgggctacagcacggcatcccacacctgcatggccacgcccataacatc
gcagagcctcaggtgaggcagctgacaccgtaccaccagcaaatgcagagccctgtggat
aaatacccgactcctccatcgcaccgcagctacgccagcggcgccgggtcagaagcggta
gcgaccccgggtcagggctctgaggtcacgaccccaggtcatggagcgctgccctctagc
gagcacccgtacctgacgccgtcgcccgagtcgcccgatccctggtcctcctcctcgtcg
cctcactcgcattcagactggtctgatgtaaccacgagcccacacggcgcgctgcatacg
cacgccgtgcaccctcacacacacgcacacactcacgttccagagcaggctcctctgctg
cagccgcagccctcgcagccagcgcagccggcgcaacagcagcaagcctgcagcagcgtg
tacgcgtaa
DBGET
integrated database retrieval system
