KEGG   Ictalurus punctatus (channel catfish): 108265571
Entry
108265571         CDS       T04658                                 
Name
(RefSeq) DNA polymerase delta subunit 2
  KO
K02328  DNA polymerase delta subunit 2
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03030  DNA replication
ipu03410  Base excision repair
ipu03420  Nucleotide excision repair
ipu03430  Mismatch repair
ipu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108265571
   03410 Base excision repair
    108265571
   03420 Nucleotide excision repair
    108265571
   03430 Mismatch repair
    108265571
   03440 Homologous recombination
    108265571
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ipu03032]
    108265571
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108265571
DNA replication proteins [BR:ipu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    108265571
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      108265571
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     108265571
SSDB
Motif
Pfam: DNA_pol_D_N DNA_pol_E_B
Other DBs
NCBI-GeneID: 108265571
NCBI-ProteinID: XP_017323551
Ensembl: ENSIPUG00000002459
UniProt: A0A2D0R0J9
LinkDB
Position
5:complement(1296810..1303246)
AA seq 467 aa
MFSDVTVPKETLLRPPSSDAPVFEREEPSYSGCSGCFRLGERSFSRQYAHIYATRLMQMR
EILGDRARQKWGKVVPIRKLCDLETGERCVIVGTLFKHMELQPSILKEISEEHNLLPQPP
RAKYISQSDELILEDELQRIKLEGQIDTSKFVTGSVIAILGAEKNDGKFTVEDFCLADLP
PQTPREPLNTDRFVLLASGLGLGGSRAESMLGLQLLVDTVTGHLGDIGEQSGAASISRVL
LAGNLLSRSTQDKDSSMKAKYLTKKTQAGSVEAIRLLDELLVQLVASVAVDVMPGEFDPT
NYTLPQQALHGCMFPLCGSYRTLQLVTNPYQAVLDGVHFLGTSGQNVSDIVKYSSVDDHL
EILENTLRLRHLAPTAPDTLGCYPFYQKDPFILSECPHVYFSGNAPSYQSKRITGTEGQE
VLLLTIPEFSSTQTACLVNLRTLECEPIRFSAFSAEDEEESEMNVSH
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgttctcggacgtcacggtgccgaaggagacgctgctccgtcctccgagctccgacgcg
ccggtgttcgagcgagaagagccgtcctactccggctgctcggggtgtttccgtctcgga
gagcgcagcttcagccgtcagtacgctcacatctacgccacgcgcctcatgcagatgcgg
gagatcctgggcgaccgagcgcggcagaaatgggggaaggtggtgccgatcaggaagctg
tgtgacctggagacgggcgagaggtgcgtgatcgtgggcacgctgttcaaacacatggag
ctgcagccgtccatcctgaaggagatcagtgaggagcacaacctgctcccgcagccccct
cgagccaaatacatcagccaatcagacgagctgattctggaggacgagctgcagaggatc
aaactggagggccaaatcgacacgtccaagtttgttaccggaagtgtgattgcgattctg
ggtgccgagaaaaacgatggtaaatttacggtggaggatttttgtctggctgacctgccg
cctcagacgccccgagaacctttaaacacggacaggttcgtgctcctggcttcgggtctg
gggttgggcggcagcagagcagagagcatgctgggattgcagctgctggtcgacacggta
acgggtcacctcggcgacattggggagcagagcggggcggcgtccatctctcgtgtcctg
ttggctggaaacctgctgagtcgaagcacacaggataaagactccagcatgaaggcgaag
tatctgactaagaagacacaggcaggaagtgtggaggccatcagactgctggatgagctg
ctggttcagctggtggcctctgtagcagtggacgtgatgccaggagagtttgaccccact
aactacactctgccccagcaggccctgcacggctgcatgttccctctgtgtggctcgtac
cgaaccctgcagctcgtcaccaacccctaccaggccgtgttggacggcgtacattttctg
ggcacgtcgggacagaacgtgagcgacattgtgaagtacagcagcgttgacgatcacctg
gagattctggagaacacactgcgactccgacacctcgctcctaccgcccccgacacgctg
ggttgttacccgttctaccagaaggacccgttcatccttagtgagtgtcctcatgtgtat
ttcagtggaaacgctccgagctaccagtccaaacggatcacaggtactgaaggtcaggag
gtgctgctgttgacaatcccagaattcagcagtacgcagacggcctgcctggtgaacctg
cgcacgcttgagtgtgagccgatcagattctccgccttttccgccgaagatgaagaggag
agcgagatgaacgtcagccactga

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