Ictalurus punctatus (channel catfish): 108265571
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Entry
108265571 CDS
T04658
Name
(RefSeq) DNA polymerase delta subunit 2
KO
K02328
DNA polymerase delta subunit 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03030
DNA replication
ipu03410
Base excision repair
ipu03420
Nucleotide excision repair
ipu03430
Mismatch repair
ipu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108265571
03410 Base excision repair
108265571
03420 Nucleotide excision repair
108265571
03430 Mismatch repair
108265571
03440 Homologous recombination
108265571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
108265571
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108265571
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
108265571
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
108265571
MMR (mismatch excision repair)
DNA polymerase delta complex
108265571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_D_N
DNA_pol_E_B
Motif
Other DBs
NCBI-GeneID:
108265571
NCBI-ProteinID:
XP_017323551
Ensembl:
ENSIPUG00000002459
UniProt:
A0A2D0R0J9
LinkDB
All DBs
Position
5:complement(1296810..1303246)
Genome browser
AA seq
467 aa
AA seq
DB search
MFSDVTVPKETLLRPPSSDAPVFEREEPSYSGCSGCFRLGERSFSRQYAHIYATRLMQMR
EILGDRARQKWGKVVPIRKLCDLETGERCVIVGTLFKHMELQPSILKEISEEHNLLPQPP
RAKYISQSDELILEDELQRIKLEGQIDTSKFVTGSVIAILGAEKNDGKFTVEDFCLADLP
PQTPREPLNTDRFVLLASGLGLGGSRAESMLGLQLLVDTVTGHLGDIGEQSGAASISRVL
LAGNLLSRSTQDKDSSMKAKYLTKKTQAGSVEAIRLLDELLVQLVASVAVDVMPGEFDPT
NYTLPQQALHGCMFPLCGSYRTLQLVTNPYQAVLDGVHFLGTSGQNVSDIVKYSSVDDHL
EILENTLRLRHLAPTAPDTLGCYPFYQKDPFILSECPHVYFSGNAPSYQSKRITGTEGQE
VLLLTIPEFSSTQTACLVNLRTLECEPIRFSAFSAEDEEESEMNVSH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgttctcggacgtcacggtgccgaaggagacgctgctccgtcctccgagctccgacgcg
ccggtgttcgagcgagaagagccgtcctactccggctgctcggggtgtttccgtctcgga
gagcgcagcttcagccgtcagtacgctcacatctacgccacgcgcctcatgcagatgcgg
gagatcctgggcgaccgagcgcggcagaaatgggggaaggtggtgccgatcaggaagctg
tgtgacctggagacgggcgagaggtgcgtgatcgtgggcacgctgttcaaacacatggag
ctgcagccgtccatcctgaaggagatcagtgaggagcacaacctgctcccgcagccccct
cgagccaaatacatcagccaatcagacgagctgattctggaggacgagctgcagaggatc
aaactggagggccaaatcgacacgtccaagtttgttaccggaagtgtgattgcgattctg
ggtgccgagaaaaacgatggtaaatttacggtggaggatttttgtctggctgacctgccg
cctcagacgccccgagaacctttaaacacggacaggttcgtgctcctggcttcgggtctg
gggttgggcggcagcagagcagagagcatgctgggattgcagctgctggtcgacacggta
acgggtcacctcggcgacattggggagcagagcggggcggcgtccatctctcgtgtcctg
ttggctggaaacctgctgagtcgaagcacacaggataaagactccagcatgaaggcgaag
tatctgactaagaagacacaggcaggaagtgtggaggccatcagactgctggatgagctg
ctggttcagctggtggcctctgtagcagtggacgtgatgccaggagagtttgaccccact
aactacactctgccccagcaggccctgcacggctgcatgttccctctgtgtggctcgtac
cgaaccctgcagctcgtcaccaacccctaccaggccgtgttggacggcgtacattttctg
ggcacgtcgggacagaacgtgagcgacattgtgaagtacagcagcgttgacgatcacctg
gagattctggagaacacactgcgactccgacacctcgctcctaccgcccccgacacgctg
ggttgttacccgttctaccagaaggacccgttcatccttagtgagtgtcctcatgtgtat
ttcagtggaaacgctccgagctaccagtccaaacggatcacaggtactgaaggtcaggag
gtgctgctgttgacaatcccagaattcagcagtacgcagacggcctgcctggtgaacctg
cgcacgcttgagtgtgagccgatcagattctccgccttttccgccgaagatgaagaggag
agcgagatgaacgtcagccactga
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