Ictalurus punctatus (channel catfish): 108265580
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Entry
108265580 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ipu01001
]
108265580
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108265580
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108265580
Protein kinases [BR:
ipu01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
108265580
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108265580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
108265580
NCBI-ProteinID:
XP_017323584
Ensembl:
ENSIPUG00000010731
UniProt:
A0A2D0QZ38
LinkDB
All DBs
Position
5:29597407..29629083
Genome browser
AA seq
1226 aa
AA seq
DB search
MADNKGQGDTESPASMEVEPPTTLNGDAAGEHSDKANDTDAVLKDGDDGQSRETAPGTPT
PSAESSEPVAATAADGGGGGGGVAATAAAAAAAGAGAGGEVEGGGEASASRSNVNRSPDA
NSNTESTEPSLPAVDATATATPVVAAAAAAAAAVAGTSSPAPGTETAAVAASAPSAVPLN
LLDTCAVCKQSLQSRECEPKLLPCLHSFCLKCIPQPERQISVGVAGPHGQDTHIVNVMRC
TVCYQDYKQIDLVDNYFVKDTTEASNTATEKSTQVCTSCEDNASAIGFCVECGEWLCKTC
IEAHQRVKFTKDHTIRKKEEVSQESVSTSGQRTVFCPIHKQEALKLFCETCDKLTCRDCQ
LLEHKEHRYQFLEEAFENQKGIIETFMAKLHEKRNFVQFSAAQVQNRLKEAAETHKKVEH
EIKIAVFTLINEINKKGKALLQQLESVTKERTVKLINQQRDISSLAQQILHVLRFTHWAI
SNGSSTALLYSKRLITYQLRFMLKARVDAVPHANGAVRFFCDPTFWAKNVVNLGNLVIEK
VPPPNPHPPNMMMGQQISPGHNTAGKHPGQINLAQLRLQHMQQQAAFAQKQQQQQQQQHQ
QQQHQQHQQQIQQQMRIASQISQHPRQGGPPQMIQQQPPRLISMQSLQREGVNGGPHMYP
PPPHLRMANSQNRMPVTQPRLNGQPYPMMQSQLQRQHSNPGHVGPFPASSLHNVSAANPT
SPTSASMASAHGHRGPTSPVVGPIELIPSVTNPENLPCLPDIPPIQLEDAGSTMLDNLLS
RYISASTQPPTLASNNNLNSSPGPSTHSPGSSGLSSSLTPARPSSSSSTGSRGSRGSAGS
SGPGNAAAEQVKVKQEPGAEEECGFSGANVKSERSKDGRRSACMMSSPEASLTPPLPVLG
SVSTGSVQDILRTLGENIKMEPQSENQPPSCSSTQKPSSNSSAHFTNGTQTTLSHRSQRS
NVGGSQTNATSQSNTDGKEDDPNEDWCAVCQNGGELLCCDRCPKVFHITCHVPTLRSSPS
GDWMCTFCRSLTNPEIEYNCDDDPPSKKDLSEQGLSPEDQRRCERLLLYLFCHELSIEFQ
EPVPSSVPNYYKIIKNPMDLNLVKRKLQLKHTQHYQSPKEFVYDVRLVFSNCAKYNEMSR
IIQVYDEEKQSNVQADSEVAEAGRAVSLYFEEKLAMIFPDQSFPVEPEKRSRDEGTAEEE
AEDSDDDFVQPKRKRLKPEEKPLHVK
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggccaaggggatacagagagcccagctagcatggaggtagaacct
ccgacgacgcttaacggagacgccgctggtgaacattcagataaggctaacgacacagac
gctgtcttgaaggatggagacgacggacagtctcgggaaaccgctccggggacgccgaca
cccagcgccgagagtagcgagcccgtcgccgccactgccgccgatggagggggaggagga
ggaggagtagcagcaacagcagcagcagcagcagcagcaggagcaggagcaggaggagag
gtagaaggaggaggggaagcgagcgccagccgcagtaacgttaaccgtagcccggacgcg
aactcgaatacagaaagcacggagccctctctgcccgcggtagacgccacggccaccgcc
actcccgtcgttgccgccgccgccgctgccgcagcagcagtggcgggcacttcttccccc
gctcccggtacagaaacggccgctgtcgctgcttcggctccgtccgcggtgccgctaaac
ctcctggatacgtgcgccgtgtgtaaacagagcctccagagccgcgagtgcgagcccaaa
ctcctgccatgtctgcactctttctgcctaaagtgtatccctcaacccgagagacagatc
agcgtaggagtcgccggtccccacggtcaggacacacatatcgtgaatgtcatgaggtgt
acagtgtgctaccaggactacaaacagatcgacttggtggacaattactttgtgaaggac
acgaccgaggcttctaacactgcgacagaaaaatcaacacaggtatgcaccagctgtgaa
gacaacgccagcgccattggattctgtgtggagtgtggtgaatggctatgcaagacatgc
atcgaagcacaccagagagtgaaattcaccaaggatcatacgatacgtaaaaaagaggag
gtctctcaagagtccgtaagtacttcgggacagaggacggtcttctgtccgatccacaaa
caggaagcactcaagctcttctgtgagacctgcgacaagctgacatgcagagactgccag
ctgctggagcacaaagagcacaggtaccagttcctggaggaggcctttgagaatcagaaa
ggaattattgagacgttcatggccaaactgcacgagaagaggaatttcgtacagttttct
gcagctcaggtgcaaaatagattaaaagaggcagctgagacgcacaagaaggttgagcat
gagattaagattgccgtcttcacgcttatcaatgaaatcaacaagaaaggcaaagctctg
cttcagcagctggagagcgtgacgaaggagcgcaccgtgaagttgataaaccagcagcga
gatatcagctcactggcgcagcagatcctgcacgttctgcgcttcacacactgggccatc
agcaacggcagcagcaccgcattgctctacagcaagagactgatcacctaccagctgcgc
ttcatgcttaaagctcgtgttgacgcggtgcctcatgccaacggagcggtccgcttcttc
tgtgaccccaccttctgggccaagaatgtcgtaaacctcgggaacctggtgattgagaag
gttcccccaccaaacccccaccctcccaatatgatgatggggcagcagatttcaccaggc
cacaacaccgcaggaaaacaccctgggcagatcaacctggcacagctgcgacttcagcac
atgcagcagcaggctgcttttgcacagaaacaacagcagcagcagcagcagcagcatcaa
caacagcagcatcaacagcatcaacagcagatacagcaacaaatgcgcattgcctcgcaa
atatcccagcatccacgacagggaggaccgcctcagatgattcagcagcagccgccaaga
ctcatcagtatgcagtcgctgcagagggagggtgttaacggtgggccccacatgtacccc
ccaccccctcacctgcgcatggccaactcgcaaaaccgcatgcctgtgacccagccccgc
ctcaacggccaaccatatcccatgatgcaatcacagctccagagacagcattccaacccc
ggccacgtcggccccttccctgcatcatccctgcacaacgtcagtgctgccaaccccacc
agccccaccagcgccagtatggccagtgcacatggccaccgggggcccaccagccctgtg
gtgggccccatcgagctcattccttcagtgaccaaccctgagaacctgccctgcctcccc
gacatcccccccattcagttggaagatgcaggttccaccatgttggacaatctcttaagt
cgctacatttccgctagcacacaacctccaactctggcatctaacaacaacctcaactcc
tcaccgggcccctccacacactctccagggtcctcagggttatcaagctcactcactcct
gcacggccgtccagctcctccagcacaggaagtcgcggcagccgagggtcagcgggcagt
tcagggcctgggaacgcagctgcagaacaggtgaaggtcaaacaggagcctggtgcggag
gaggagtgtggattctctggggccaacgtcaagtcagaacggagcaaagatggccgacgg
agtgcctgcatgatgagcagtccggaagccagcttgactcctcctctccctgtactcggt
tccgtgtccaccggttctgtgcaggacattttaaggacattgggagagaacattaaaatg
gagccccagagcgagaaccagccgccgtcctgcagcagtacgcaaaagccgagctccaat
agcagtgctcacttcaccaacgggacccagaccactctttcccatcgctctcagaggagc
aacgttggtggctctcagacgaacgccaccagccagtcgaacacggacggaaaagaggac
gacccgaacgaagactggtgtgcagtgtgtcagaatgggggagaactcctgtgctgcgac
cgctgccctaaagtcttccacatcacctgtcatgttcctacactccgctcctcacccagt
ggagactggatgtgcacgttttgtagaagtctgaccaaccctgagatagagtataattgc
gatgatgatcctcctagtaagaaagacctgagtgagcagggtctgagtcctgaggaccag
aggagatgtgagcgtctgctgctttatttattctgccatgagttgagtatagagtttcag
gaacccgttccttcttcggtgcccaactactataagatcataaagaaccccatggacctg
aacctggtgaagagaaaactgcagctgaagcacacgcagcattaccagagccccaaagag
tttgtctacgatgtccgtctggtgttcagcaactgtgccaagtacaacgagatgtctcga
ataatccaggtatatgatgaggagaaacagagtaatgtgcaggctgactctgaggtcgcc
gaggcaggaagggctgtgagtctgtacttcgaggaaaagctggctatgatctttcccgac
cagagtttcccagtagaaccggagaaaagatcccgggacgaggggaccgccgaggaagag
gcagaggactcggacgacgatttcgtgcagccaaagcggaagaggttaaaacccgaagaa
aagcctttacacgtaaagtga
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