Ictalurus punctatus (channel catfish): 108265614
Help
Entry
108265614 CDS
T04658
Name
(RefSeq) mRNA export factor GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03013
Nucleocytoplasmic transport
ipu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108265614
03015 mRNA surveillance pathway
108265614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108265614
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108265614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
108265614
NCBI-ProteinID:
XP_017323641
Ensembl:
ENSIPUG00000013197
UniProt:
A0A2D0R0T7
LinkDB
All DBs
Position
5:16474515..16513358
Genome browser
AA seq
722 aa
AA seq
DB search
MREVYIKMPVLKSESIRWETLEALKNSAKAKVKYSPDWLEKGEDILAGCKEVTSLSPLSE
QVLKRLSPQTVLKSGSCLGSMIPDASTSEDGLNSGSAAVKMLHTFTTTSSTSPLLFTVEN
KVKVTDDNSESLSSTVDMCSSLPPPISLLSPKATQMAGCIRICEKKHWAKAKAELNLRQE
LQECLVAGVASRESEQLKRFEEFMELKQRQEYQSMRDMMEKETQESLGRQEKLKEEHRMK
ILNLRLREAEQQRLREAELERQRQLDGRDRLRALNAIQEEVLRLNQLLEPAPYTQTSPTL
DYTSYVTRGNQLCSQVSEVVRTMTEGQFPTVEDMTVAERALQEMRTLVRAIQEEFAQAQE
QKKIEQEEEECRKKQAGMKPQQEEKKKSAALPVKERVKKQGLQTTADDSTLKWYKELQSL
ASHCAQSFEDLNNTKDMQTKKMRMELQKAATIPVSQISSISGSQLKEIFDKIDKLLLGQP
VVSGGKSVSTSQHPHGLEFVSYKLAEKFVKQGEEEVASHHEAALPIAVVASGVWELHPKV
GDLILAHLHKKCPYAVPHYPPMKDGTSIEEYQQILGYRVDESGVEGQDSFLKRMSGMIRL
YAAIIHLRWPYTNKQGAGPHGMNHGWRWLAQMLNMEPLADVTATLLFDFLEVCGNALMKQ
YQGQFWKLLVLLKEEYFPRIEAVTSSGQMGSVTRLKHFLENSLRNQQIEPPKGQLNSAFW
RS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagagaggtttacatcaaaatgccagtcttaaagtctgaaagtattagatgggagacg
ctggaagctttgaaaaactcagcgaaagcaaaagtcaaatatagtccagattggcttgaa
aagggggaggacattttagcaggctgtaaagaggtaacgagcctgtcccctctctctgaa
caagttctaaagagactgagccctcagactgttctgaaaagtggttcctgcttggggtcc
atgatccctgatgcaagtacatctgaagatggccttaactctggttcagcagctgttaaa
atgttacatactttcactactacatcatccacctcaccactgctgttcactgtcgaaaat
aaggtgaaggtgacagatgataattcggagagtttgagctccactgtggacatgtgcagc
agtttaccaccacccatctccctcctctcacccaaggccactcagatggcaggatgcatc
cgcatctgtgagaagaaacattgggctaaagccaaggcagagctgaacctgaggcaggag
ctgcaagagtgtctggtggctggtgttgccagtcgggagtcagagcagcttaaacgcttt
gaggagttcatggagcttaagcagagacaggagtaccagagcatgagggacatgatggaa
aaggaaacacaggaaagccttggacgccaggagaagttaaaggaagaacacagaatgaag
atcctaaacttgcggctgcgggaggcagaacagcagaggctgagggaggcagagcttgag
cggcagaggcagctggatggcagggacaggctgagagcactcaatgccattcaagaggag
gtgcttaggctcaatcagctcctggaacctgcaccttacacacaaacaagccccaccttg
gactatacttcatacgtcacccgtggcaaccagctttgttcacaggtttcagaggtggta
cgcactatgactgaaggacaatttccaactgttgaggacatgactgtggcagaacgggca
ctacaggaaatgagaacactggttagagccatccaggaggagtttgctcaggcacaagag
caaaagaagatagagcaggaggaagaagagtgcaggaagaaacaggcagggatgaaaccc
cagcaagaagaaaagaagaaaagtgcagcattacctgttaaagagagagtcaaaaaacaa
ggcctgcagactacagctgatgacagcaccttgaaatggtacaaagaactgcaaagtctg
gccagccactgcgcccagtcctttgaagatttgaacaacacaaaggatatgcagacaaaa
aagatgaggatggagctccagaaggctgcaacaattcctgtgagccagatctccagtatt
tcaggttcccagctgaaggagatttttgacaagattgacaaactgttattaggacaacca
gttgtgtctggtggaaagtcagtttccacatcccaacatcctcatggactagaatttgtg
agctataaattggcagaaaagtttgtgaaacaaggagaagaggaggtggcatctcaccat
gaagctgcattacccattgcagttgtagcctcaggtgtgtgggagttgcatcctaaagta
ggagacctcatcttagcccatctccacaagaagtgtccatatgctgttcctcactaccct
ccaatgaaggatggcacctccattgaagaatatcagcagattctgggatatcgtgtggat
gagtcaggggtggaaggtcaggacagtttcttaaaaaggatgtctggaatgatccgatta
tatgcagccataatacacctacgatggccttacactaacaaacaaggggctggtcctcat
ggaatgaatcatggctggcgttggttggcccaaatgctgaacatggaacctcttgctgat
gttacagcaactcttctgtttgactttctagaggtttgtggaaatgcacttatgaaacaa
taccaagggcagttttggaaacttctagtcctcctcaaagaggaatactttcccaggatt
gaagcagtcaccagcagtggacagatgggctctgtaacaagacttaagcactttctggag
aactcattaagaaaccagcagattgagccacccaaaggacaactaaactcagccttctgg
agatcctga
DBGET
integrated database retrieval system
