KEGG   Ictalurus punctatus (channel catfish): 108265626
Entry
108265626         CDS       T04658                                 
Name
(RefSeq) WD repeat-containing protein 46
  KO
K14768  U3 small nucleolar RNA-associated protein 7
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ipu03009]
    108265626
Ribosome biogenesis [BR:ipu03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    108265626
SSDB
Motif
Pfam: BING4CT Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st EIF3I Beta-prop_EML_2 Beta-prop_WDR5 Beta-prop_WDR90_POC16_2nd WD40 WDR55 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR11_1st Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st B-prop_COPA_B_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_SCAP
Other DBs
NCBI-GeneID: 108265626
NCBI-ProteinID: XP_017323663
Ensembl: ENSIPUG00000022420
UniProt: A0A2D0QZ36
LinkDB
Position
5:8132732..8141882
AA seq 593 aa
MAAPVQEALASTHVEKKKKPPKRYWEETKTEDDKTTDKGKNSEVEAPHEVTEKKPYQRRK
ERKRRVERTIMSGKNDPFPGEAAIPEQQLKKFERGKKFQKLNNTRMKAKEIITKCEAASE
LAQKEAARYDLMLPEDAGFLEGDEGEDTCTVSQEDIAEAVDITSGAKYFNLHLTQFGPYR
LDYSRTGRHLLLGGRRGHVSCIDWQTKHLMCEMNVMETVQDIKWLHTESMFAVAQKKWLY
IYDSKGIELHCIKKFNDVLRMQFLPYHFLLATASATSFLQYLDVSVGKEVAAICTRSGRL
DVMAQNPHNAIIHLGHPNGTVSLWSPNQKEPLVKMLCHRGAVRSLTVDKTGTYMVTSGLD
RRLKVYDIRAFKPLHKYFLPAGASCLSLSQKGLLSAATGDVVQVYRDVWGGGPVSKPYMA
HRVRGSVWGVGFCPFEDVLGIGHGEGFTSMIVPGAGEPNFDALDVNPYRSIKQRQEWEVK
ALLEKVQPELIGLDPGLLGKVDQATFEQKHKERVEALGYDPLANEKFKPRFKKRGKSTAG
AVEKRKKKVGHEDQRDVIRKTVEERMEREKERKERSKQLAEQGGKTALARFKK
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggcggcgcccgtgcaggaagcgttggccagcacacacgtggagaaaaagaaaaagccc
cctaagcgttactgggaagaaacgaaaactgaagatgataagactacagataaaggcaaa
aacagtgaagttgaagcaccgcacgaagtgacagaaaaaaaaccttaccagcgacgaaag
gagaggaaaaggagagttgagagaacgatcatgtcagggaaaaatgaccctttccctggc
gaggccgctatcccagaacagcagttgaagaaattcgagcgaggcaaaaaatttcaaaag
ctgaacaacaccagaatgaaggcgaaagagatcatcaccaagtgcgaggcggcttctgag
ctagcacagaaagaggctgcacgatatgatctgatgctcccagaggatgctgggttcctg
gagggagatgagggcgaggacacgtgcactgtatcacaggaagacatagcagaggctgtt
gatattacatctggtgcaaagtactttaacttgcatctgacccagtttggaccatacaga
ctagactacagcagaactggccggcatctgttactaggtggaaggagaggtcatgtgagt
tgcatagattggcagacaaaacaccttatgtgcgagatgaatgtcatggaaacggttcaa
gatatcaagtggctccacacagagtccatgttcgctgtcgctcagaagaagtggctttac
atctatgactccaaaggcatagagctgcattgcatcaaaaaattcaacgacgtcctacgc
atgcaattcctcccctaccacttcctgcttgccacagcgagcgccacaagtttcctgcag
tacctggatgtgtccgtgggaaaggaggtggcagcgatctgcacaaggtcaggcaggctt
gatgtgatggcacagaatccccacaatgccatcatccacctgggtcatcctaatggcact
gtcagcctgtggtctcccaatcagaaagagccgttagttaaaatgctgtgccacaggggc
gcagtccgctcactcactgtggacaaaactggcacgtacatggtgacgtcaggactggac
agaaggctgaaagtttatgacattcgagcatttaagccacttcataagtacttcttgcct
gctggagcctcctgcctttccctcagtcagaaaggactgctcagtgctgctactggagat
gtagtacaggtgtaccgggatgtttggggaggcgggccggtatccaagccctacatggca
catcgtgtgagaggttcagtatggggcgttgggttttgccccttcgaggacgtccttggt
attggacatggagaagggttcacaagtatgattgtgccaggtgcgggtgaaccaaacttt
gatgctctggatgtgaacccataccgcagcataaagcagagacaggaatgggaggtcaag
gctctcctggagaaagttcagcccgaactgattggtctggacccagggctgctgggtaaa
gtggaccaggccacatttgagcaaaagcataaagaaagagtggaggcattgggctacgat
ccattagcaaatgaaaagtttaagccaagatttaaaaagagaggcaaaagtacagctggt
gctgtggagaagaggaagaagaaagtgggccatgaggatcagagggacgtgattcggaaa
acagtggaggagagaatggagagagaaaaggagaggaaggagcgttccaagcagctggct
gagcagggggggaagactgcactggcccgattcaagaagtag

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