Ictalurus punctatus (channel catfish): 108265626
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Entry
108265626 CDS
T04658
Name
(RefSeq) WD repeat-containing protein 46
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108265626
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108265626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
EIF3I
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_WDR90_POC16_2nd
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR11_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
B-prop_COPA_B_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
108265626
NCBI-ProteinID:
XP_017323663
Ensembl:
ENSIPUG00000022420
UniProt:
A0A2D0QZ36
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Position
5:8132732..8141882
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AA seq
593 aa
AA seq
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MAAPVQEALASTHVEKKKKPPKRYWEETKTEDDKTTDKGKNSEVEAPHEVTEKKPYQRRK
ERKRRVERTIMSGKNDPFPGEAAIPEQQLKKFERGKKFQKLNNTRMKAKEIITKCEAASE
LAQKEAARYDLMLPEDAGFLEGDEGEDTCTVSQEDIAEAVDITSGAKYFNLHLTQFGPYR
LDYSRTGRHLLLGGRRGHVSCIDWQTKHLMCEMNVMETVQDIKWLHTESMFAVAQKKWLY
IYDSKGIELHCIKKFNDVLRMQFLPYHFLLATASATSFLQYLDVSVGKEVAAICTRSGRL
DVMAQNPHNAIIHLGHPNGTVSLWSPNQKEPLVKMLCHRGAVRSLTVDKTGTYMVTSGLD
RRLKVYDIRAFKPLHKYFLPAGASCLSLSQKGLLSAATGDVVQVYRDVWGGGPVSKPYMA
HRVRGSVWGVGFCPFEDVLGIGHGEGFTSMIVPGAGEPNFDALDVNPYRSIKQRQEWEVK
ALLEKVQPELIGLDPGLLGKVDQATFEQKHKERVEALGYDPLANEKFKPRFKKRGKSTAG
AVEKRKKKVGHEDQRDVIRKTVEERMEREKERKERSKQLAEQGGKTALARFKK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtgcaggaagcgttggccagcacacacgtggagaaaaagaaaaagccc
cctaagcgttactgggaagaaacgaaaactgaagatgataagactacagataaaggcaaa
aacagtgaagttgaagcaccgcacgaagtgacagaaaaaaaaccttaccagcgacgaaag
gagaggaaaaggagagttgagagaacgatcatgtcagggaaaaatgaccctttccctggc
gaggccgctatcccagaacagcagttgaagaaattcgagcgaggcaaaaaatttcaaaag
ctgaacaacaccagaatgaaggcgaaagagatcatcaccaagtgcgaggcggcttctgag
ctagcacagaaagaggctgcacgatatgatctgatgctcccagaggatgctgggttcctg
gagggagatgagggcgaggacacgtgcactgtatcacaggaagacatagcagaggctgtt
gatattacatctggtgcaaagtactttaacttgcatctgacccagtttggaccatacaga
ctagactacagcagaactggccggcatctgttactaggtggaaggagaggtcatgtgagt
tgcatagattggcagacaaaacaccttatgtgcgagatgaatgtcatggaaacggttcaa
gatatcaagtggctccacacagagtccatgttcgctgtcgctcagaagaagtggctttac
atctatgactccaaaggcatagagctgcattgcatcaaaaaattcaacgacgtcctacgc
atgcaattcctcccctaccacttcctgcttgccacagcgagcgccacaagtttcctgcag
tacctggatgtgtccgtgggaaaggaggtggcagcgatctgcacaaggtcaggcaggctt
gatgtgatggcacagaatccccacaatgccatcatccacctgggtcatcctaatggcact
gtcagcctgtggtctcccaatcagaaagagccgttagttaaaatgctgtgccacaggggc
gcagtccgctcactcactgtggacaaaactggcacgtacatggtgacgtcaggactggac
agaaggctgaaagtttatgacattcgagcatttaagccacttcataagtacttcttgcct
gctggagcctcctgcctttccctcagtcagaaaggactgctcagtgctgctactggagat
gtagtacaggtgtaccgggatgtttggggaggcgggccggtatccaagccctacatggca
catcgtgtgagaggttcagtatggggcgttgggttttgccccttcgaggacgtccttggt
attggacatggagaagggttcacaagtatgattgtgccaggtgcgggtgaaccaaacttt
gatgctctggatgtgaacccataccgcagcataaagcagagacaggaatgggaggtcaag
gctctcctggagaaagttcagcccgaactgattggtctggacccagggctgctgggtaaa
gtggaccaggccacatttgagcaaaagcataaagaaagagtggaggcattgggctacgat
ccattagcaaatgaaaagtttaagccaagatttaaaaagagaggcaaaagtacagctggt
gctgtggagaagaggaagaagaaagtgggccatgaggatcagagggacgtgattcggaaa
acagtggaggagagaatggagagagaaaaggagaggaaggagcgttccaagcagctggct
gagcagggggggaagactgcactggcccgattcaagaagtag
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integrated database retrieval system