Ictalurus punctatus (channel catfish): 108265641
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Entry
108265641 CDS
T04658
Name
(RefSeq) leiomodin-1 isoform X1
KO
K22030
leiomodin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108265641
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108265641
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108265641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomodulin
WH2
Fim1C-like_C
Motif
Other DBs
NCBI-GeneID:
108265641
NCBI-ProteinID:
XP_017323683
Ensembl:
ENSIPUG00000005077
UniProt:
W5UC45
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All DBs
Position
5:complement(25796451..25804050)
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AA seq
730 aa
AA seq
DB search
MSRRKVRLARSERTVSEDSDIDSLLASLSPDEVEELERELVVIDPDPSVPVGLRQRNQTD
KQPTRGYDREAMLVYCERETKKLLERELSFEGEVKGEGRRRDRLRRTRSKEQRSFSRSHS
REASDKDEAKDEKAHVKEEKTLYKNCKGGEMKIENEVNETSEIKPECRETERGKEMLSVT
NLEGEVENKKYKQREASKKEQGSSKTSELISKLQKKEDNKEKERKDNSKNGENLRTKGLI
SKLQGNKEVENREKEEKGKEVEKKRESKTKGLVSKLEEQKSQKDHGRVPERRSRLRNLED
PVIEKKKEKEQEKCTEKSKLYPERDITGTEKRKDRLKRWGKVDEIEMEQERQKEEEKKPD
RGKDEGKGVVKNAKTHNNVTETCSSGDDQSAKTEDEEDYMDSDTGSSMFDDLLEQVRSDD
PELTELNINNSDVIKTDTLIQFAEGLRSNTHIKTFALANTRADDHVAFAIAGTLRNNTTL
TGINLDSNLLTGKGILAIIDSLQHNATLKELRFHNQRHICGGKTEMEMAKVLRDNTSLLK
LGYHFELAGPRMTMTNILSRNMDRQRQKRLEEQRLVKQEAHASSAPPSEEKKKLIPDKPK
LKQTPQSNPVEKKESILAKVSKFNNPSSPPKATPHPKSTAAPSSSKATGKKGGLTTESSP
GPPAPPPPPAPVMDIQALRRSLTSVSQRKQDSSNVSGSGTQKSSRDQLLDSIRNCNMNTL
KKVEVPKWLK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggaggaaagttcgtctcgcgcgctctgagcgcacagtgagcgaggactcggat
atagacagcctgctagcgagtctctctcccgatgaggtggaggagctggagagagagctg
gttgtcatcgacccggatcccagtgtaccggtggggctcaggcagagaaaccagaccgac
aaacagccgacacgtggctacgaccgtgaagccatgctggtctactgcgagcgcgagacc
aagaaactcctagagcgcgagctgtcctttgagggggaggttaaaggtgaaggccgtaga
cgggatcggctaaggagaacaagaagcaaagaacagcggagcttttctaggtcacacagc
cgtgaagcatctgacaaggatgaggccaaagatgaaaaagcacatgtcaaagaggaaaaa
actttgtacaaaaattgcaagggtggagaaatgaaaatagagaatgaggtcaatgagacc
tctgagatcaagccagaatgcagagaaacagagagagggaaagaaatgttatcagtgacg
aatctagaaggagaggtcgaaaataaaaaatataaacaaagggaggcatctaagaaagag
caaggtagcagcaagacatcagagctcatctctaaactacagaaaaaggaagataataaa
gagaaggagagaaaggacaacagtaagaatggagaaaacttgagaacgaaagggttgata
tccaagttacagggcaacaaagaggtagaaaacagggagaaagaagaaaaagggaaggag
gtagagaaaaaaagagagagtaaaacaaaaggactagtctccaaactggaggagcagaag
agccaaaaagatcatggcagagtgccagaaaggagaagcagactgagaaacctggaggat
cctgtgatagagaaaaagaaagaaaaggaacaggaaaagtgcactgagaaaagtaaactc
taccctgaaagagatataactggaacagagaaaagaaaggacagactgaaacggtgggga
aaagtggatgagatagagatggagcaagaaagacagaaagaggaagagaaaaagccagac
agaggtaaagatgaagggaagggtgtagtgaagaatgctaaaactcacaataatgttact
gagacctgcagtagtggagatgaccagtctgccaaaacggaggatgaggaagattatatg
gacagtgatactggctccagcatgtttgatgatctcttggagcaagtgcgcagtgatgat
cctgaactcaccgagcttaacatcaacaactctgatgttatcaagacagatacactgatc
cagtttgctgaaggacttcgcagtaacactcacattaaaacatttgctcttgccaacaca
agagctgacgatcatgttgcttttgccattgctgggactttacggaacaacactacgtta
acaggaatcaacctggattccaaccttctcaccggcaaaggcattctggctatcattgat
tctttgcagcacaatgccacacttaaagagcttcgcttccacaaccagagacacatctgt
ggagggaagactgagatggaaatggctaaggtactacgggataatacttcgttactcaag
ttgggttatcactttgagctagctgggccaaggatgaccatgaccaacatccttagtcgt
aatatggaccgtcagcgtcagaaacgactagaagaacaacgtcttgtcaagcaggaagct
catgcaagctcagcaccccctagtgaagagaaaaagaagcttatacctgataagcccaaa
cttaagcaaactccacagtccaaccctgttgagaaaaaggaatctatcctagcaaaagtt
tccaaatttaacaatccctcttcaccccccaaagccactccacaccccaagtccacagct
gccccctcatcctccaaagcaacaggtaaaaaaggtgggcttacaacagagtcaagccca
ggacctccagctcctcctcctcctcctgccccagtgatggatattcaggcacttcggagg
tcgttgacctcagtctctcagcgcaaacaagacagcagcaatgtctcaggaagtggaaca
caaaaaagttccagagatcagttgctggactctatcaggaactgcaacatgaacacgctc
aaaaaagttgaggttcctaagtggctgaagtag
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