Ictalurus punctatus (channel catfish): 108265666
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Entry
108265666 CDS
T04658
Name
(RefSeq) G-patch domain and KOW motifs-containing protein isoform X1
KO
K13101
G patch domain and KOW motifs-containing protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108265666
Spliceosome [BR:
ipu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108265666
Complex C
U4/U6.U5 tri-SnRNP related factors
108265666
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GFIT
Motif
Pfam:
GPKOW_C
G-patch_2
KOW
G-patch
KOW2_Spt5
KOW7_SPT5
KN17_SH3
Motif
Other DBs
NCBI-GeneID:
108265666
NCBI-ProteinID:
XP_017323727
Ensembl:
ENSIPUG00000008342
UniProt:
A0A2D0QZB1
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Position
5:4967208..4978460
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AA seq
529 aa
AA seq
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MASPEPQQNRGDNKEPLKKADEEIKPGLISFGFTKKINKTKTETAEERDFLTGVEGKELK
STKPVEKPKELIIPLIQKNRWYRHEGVKQEDGKEAPSSPSKQQDSVESQAIKELIEESQK
QQEEWKNGPQCDPNLAIPLLMQNHVPQGFEDGEQIKVDLRPESVSQDRQEYIQASTEADY
EQVPVEAYGLAMLKGMGWRQGEGIGRTFKQDVKPIEHQLRPKGLGLGADRSAIKDLQPSG
PRRPPKPGEQRDKDDEGLVLGPGGCVLVQTGAHKDLYGKIEGVDTDNARVMVKLAIGGKS
VTISQHSLRLVPRKEYDKYSKDLSRLSKAHKEKEKEKEREKERDREKDGARNQQRGEEKP
DGKDERRRDRHSEREKERENERERDQRKRKQRETDTDREKPPPMKEPRSSPPAWLQRDLR
VRFIDKTFKGGKYYNSKMRIEDVIASHVCVCRTDEGRLLDDVKQTMLETIVPKGDADSIM
VVLGEHRGQVGRILKRDKEKCRAMVQLERYEEKIFTLDYDSLCHYVGER
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccggagccgcaacaaaaccgaggcgataataaagaaccattaaagaaagca
gatgaggaaataaagcccggtctaatttctttcggttttaccaaaaagatcaataaaacc
aaaactgagacagcagaagagcgagattttttaactggagtcgaggggaaggaactaaaa
agcaccaagccggtagagaaacctaaagagctcatcattcctctgatccagaagaatcgc
tggtacagacacgaaggggtgaagcaggaggatgggaaagaagctccatcctctccatcc
aagcagcaggactctgtggagtctcaggccattaaagagcttattgaagagtctcagaag
cagcaggaggaatggaaaaatggcccacagtgcgacccgaacctggccatcccgctgctc
atgcagaaccacgtgccgcagggcttcgaggacggagaacaaatcaaagtggacctccgg
cccgagtcggtgagtcaggaccggcaggagtacatacaagcgtccacagaggccgattac
gagcaggttccggtggaggcgtatggactcgccatgctgaaaggaatgggctggaggcag
ggagagggcatcggccgcacattcaaacaagatgtgaaacctatagaacaccagttgaga
cctaaaggcctgggtctgggagctgatcgctctgccatcaaggacctgcaaccctctggg
ccccgaagacccccgaaacccggagaacagagggacaaagatgatgagggcttagtgctt
gggcctggagggtgtgtactggtccagaccggggctcataaagacctctatgggaagata
gagggggtagacacagacaatgccagagtcatggtgaaacttgccatcggtggaaaatcg
gtaaccatcagccagcactcactacgtctggtgcctcgcaaagaatacgacaaatacagc
aaagacctcagtcgcctcagcaaagcccacaaagagaaagagaaggagaaagaacgggaa
aaggaaagagacagagagaaagatggagcgcgcaaccagcagagaggagaagagaagccg
gacgggaaagacgagcggcggagagatcggcactcggagagagagaaggaacgagagaac
gagcgagagcgtgaccagaggaagaggaagcagagggaaacggatacggacagagagaaa
cctcctccgatgaaggagcctcgctcgtctccgcctgcctggctccagagagacctccgt
gtgcgcttcatagataaaacctttaaaggaggcaaatactacaactctaagatgagaatc
gaggacgtcatcgcgtcgcacgtctgcgtctgtcgtacagacgaaggacgactgctggac
gatgtcaaacagacgatgctcgagaccatcgtgcccaaaggtgacgcagactccattatg
gtggtgctgggagaacaccgaggacaggtaggccgcattctaaagcgtgataaggagaaa
tgtagggccatggtgcagctggagcgctacgaggagaagatcttcactctggactacgat
tccctctgccattacgtgggagaacgctga
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