Ictalurus punctatus (channel catfish): 108265702
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Entry
108265702 CDS
T04658
Name
(RefSeq) BLOC-1 related complex subunit 6 isoform X1
KO
K20820
BLOC-1 related complex subunit 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
108265702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108265702
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Arf GTPases and associated proteins
BLOC-one-related complex (BORC)
108265702
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BORCS6
Motif
Other DBs
NCBI-GeneID:
108265702
NCBI-ProteinID:
XP_017323794
Ensembl:
ENSIPUG00000006506
UniProt:
A0A2D0QZS1
LinkDB
All DBs
Position
5:27248423..27258932
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AA seq
444 aa
AA seq
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MSHSSGIGHDVQEETDGTDSPDSPEVCNWTAANGSASHMQKCRDGVACLEKDKQEGTPET
HAHPRHSMDPAYRQIHTNSAPHTNTYACEDGPTHTDEYTPHSETVTKDSPYMETASMPHT
QASDGWGGVEEEEEEEVRSQDDERDGEEVENREENQQTADFTVQPVKETTSEDSTTSQMP
PTEPVNCISYDDGHLSASTPPDQAPPLVPAPPPSSVPPPLLPAPDDWPRPTHVMAEVRVR
SAPGRERVVRGMQDSKSLDGISEACGSGMRAAAGEGRRATISSALELEGTVSRDGDLTHF
IAKNLEQKIKMSSRPSLDTDSDCSGPVVRGRGSLRRPADIPPIDPSVLLDLHKHTQEVAQ
SVEMMLRSLNGTIQNMTALSVGYIQTYRDSVDSLGESVDMSIKGMYTLMARCEELDRSMQ
PIQTLAAQIRDIKRTLDTLEAICK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagccactcctctgggattggccacgatgtgcaggaggagaccgatgggacggacagt
cctgactctccagaggtctgcaattggacagccgctaatggctccgcctcccacatgcag
aaatgtcgggatggagtagcttgcctggagaaagacaaacaggaaggaactcctgagact
cacgcacacccacgccacagcatggaccctgcgtacagacaaatacacacaaactcagcg
cctcacaccaacacgtacgcctgcgaagatggccccacacacacagacgaatacacacct
cactcagaaaccgtaaccaaagacagtccatacatggaaactgccagcatgccacacaca
caagcaagtgatgggtggggaggagtggaggaggaggaggaggaggaggtcagaagccag
gatgatgaaagagatggtgaggaagtggaaaacagggaggagaatcagcagacagcagac
tttactgtgcagccagtaaaagagaccacgtctgaagactcaaccacttcacaaatgcca
cctacagaaccggtcaactgtatctcttatgatgatggtcatttgtctgcttccacgccc
cctgaccaggccccgcctctggtcccagctcctcccccgagctcagtccctcctcccctg
ctgccagcacctgatgattggccacggccgactcacgtgatggcagaggtgcgggtgcgt
tctgctcctggacgagagcgggttgtgcgtggtatgcaggacagtaagagtctggacggc
atcagtgaagcgtgcggaagtggcatgcgggcggcggcaggcgagggtcgcagggccact
atctccagcgccctggaactggagggaacagtgagccgtgacggagatctcacccacttc
attgccaagaacttggagcagaaaatcaaaatgagttcgcgccccagccttgacacagac
tcggactgctcaggcccagtggtgcgaggtcgtggttcgttgcgtcgaccagctgacatc
ccgcccatagaccccagtgtgctactggacctacacaaacacactcaggaggttgcacag
agcgtggagatgatgctccgcagcctcaatggaaccatccagaatatgacagcattgagt
gtgggttatattcagacataccgagactctgtggacagtttgggggaatcggtagatatg
agcataaagggaatgtacacactgatggcacgttgtgaggaactggatcgctccatgcag
cccatccagacgctcgcggctcagatcagagacatcaagcgcacattggacactctggaa
gccatctgcaagtaa
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